miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41215_crt-MIR168:mirbase
          Length = 201

 Score = 73.8 bits (37), Expect = 3e-14
 Identities = 37/37 (100%)
 Strand = Plus / Plus

                                               
Query: 8  cggcggtctctaattcgcttggtgcaggtcgggaact 44
          |||||||||||||||||||||||||||||||||||||
Sbjct: 7  cggcggtctctaattcgcttggtgcaggtcgggaact 43



 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                
Query: 103 tcccgccttgcatcaactgaatcggagcccgcggtga 139
           ||||||||||||||||||||||||||| ||| |||||
Sbjct: 142 tcccgccttgcatcaactgaatcggagaccgaggtga 178




>41210_ccl-MIR168:mirbase
          Length = 176

 Score = 73.8 bits (37), Expect = 3e-14
 Identities = 37/37 (100%)
 Strand = Plus / Plus

                                               
Query: 8  cggcggtctctaattcgcttggtgcaggtcgggaact 44
          |||||||||||||||||||||||||||||||||||||
Sbjct: 6  cggcggtctctaattcgcttggtgcaggtcgggaact 42



 Score = 56.0 bits (28), Expect = 7e-09
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                               
Query: 103 tcccgccttgcatcaactgaatcggagcccgcggtg 138
           ||||||||||||||||||||||||||| ||| ||||
Sbjct: 141 tcccgccttgcatcaactgaatcggagaccgaggtg 176




>41101_tcc-MIR168:mirbase
          Length = 167

 Score = 73.8 bits (37), Expect = 3e-14
 Identities = 37/37 (100%)
 Strand = Plus / Plus

                                               
Query: 8  cggcggtctctaattcgcttggtgcaggtcgggaact 44
          |||||||||||||||||||||||||||||||||||||
Sbjct: 7  cggcggtctctaattcgcttggtgcaggtcgggaact 43



 Score = 65.9 bits (33), Expect = 8e-12
 Identities = 36/37 (97%)
 Strand = Plus / Plus

                                                
Query: 103 tcccgccttgcatcaactgaatcggagcccgcggtga 139
           ||||||||||||||||||||||||||| |||||||||
Sbjct: 126 tcccgccttgcatcaactgaatcggagaccgcggtga 162




>40448_gma-MIR168:mirbase
          Length = 125

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                            
Query: 10 gcggtctctaattcgcttggtgcaggtcgggaac 43
          ||||||||||||||||||||||||||||||||||
Sbjct: 7  gcggtctctaattcgcttggtgcaggtcgggaac 40



 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                 
Query: 103 tcccgccttgcatcaactgaatcggagcccgcggtgaa 140
           ||||||||||||||||||||||||||| ||||||||||
Sbjct: 87  tcccgccttgcatcaactgaatcggaggccgcggtgaa 124




>41348_ptc-MIR168b:mirbase
          Length = 136

 Score = 65.9 bits (33), Expect = 8e-12
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                           
Query: 12 ggtctctaattcgcttggtgcaggtcgggaact 44
          |||||||||||||||||||||||||||||||||
Sbjct: 1  ggtctctaattcgcttggtgcaggtcgggaact 33



 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 103 tcccgccttgcatcaactgaatcggag 129
           |||||||||||||||||||||||||||
Sbjct: 109 tcccgccttgcatcaactgaatcggag 135




>41596_vvi-MIR168:mirbase
          Length = 132

 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                          
Query: 12 ggtctctaattcgcttggtgcaggtcgggaac 43
          ||||||||||||||||||||||||||||||||
Sbjct: 1  ggtctctaattcgcttggtgcaggtcgggaac 32



 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 103 tcccgccttgcatcaactgaatcggag 129
           |||||||||||||||||||||||||||
Sbjct: 101 tcccgccttgcatcaactgaatcggag 127




>41347_ptc-MIR168a:mirbase
          Length = 160

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                           
Query: 12 ggtctctaattcgcttggtgcaggtcgggaact 44
          ||||||| |||||||||||||||||||||||||
Sbjct: 1  ggtctctgattcgcttggtgcaggtcgggaact 33



 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 103 tcccgccttgcatcaactgaatcggag 129
           |||||||||||||||||||||||||||
Sbjct: 133 tcccgccttgcatcaactgaatcggag 159




>40044_ath-MIR168b:mirbase
          Length = 124

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                               
Query: 8  cggcggtctctaattcgcttggtgcaggtcgggaact 44
          ||||||||||  |||||||||||||||||||||||||
Sbjct: 5  cggcggtctcggattcgcttggtgcaggtcgggaact 41



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 100 agctcccgccttgcatcaactgaatcggagcccgcggtga 139
           |||||||| |||| |||||||||||||||| ||| |||||
Sbjct: 85  agctcccgtcttgtatcaactgaatcggagtccgaggtga 124




>39833_aly-MIR168b:mirbase
          Length = 176

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                               
Query: 8  cggcggtctctaattcgcttggtgcaggtcgggaact 44
          ||||||||||  |||||||||||||||||||||||||
Sbjct: 29 cggcggtctcggattcgcttggtgcaggtcgggaact 65



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 103 tcccgccttgcatcaactgaatcggagcccgcggtgaa 140
           ||||| |||| |||||||||||||||| ||| ||||||
Sbjct: 112 tcccgtcttgtatcaactgaatcggagtccgaggtgaa 149




>40355_rco-MIR168:mirbase
          Length = 131

 Score = 56.0 bits (28), Expect = 7e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                      
Query: 17 ctaattcgcttggtgcaggtcgggaact 44
          ||||||||||||||||||||||||||||
Sbjct: 1  ctaattcgcttggtgcaggtcgggaact 28



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 103 tcccgccttgcatcaactgaatcg 126
           ||||||||||||||||||||||||
Sbjct: 105 tcccgccttgcatcaactgaatcg 128




>40043_ath-MIR168a:mirbase
          Length = 138

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 103 tcccgccttgcatcaactgaatcgga 128
           ||||||||||||||||||||||||||
Sbjct: 102 tcccgccttgcatcaactgaatcgga 127



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 20 attcgcttggtgcaggtcgggaac 43
          ||||||||||||||||||||||||
Sbjct: 16 attcgcttggtgcaggtcgggaac 39




>39832_aly-MIR168a:mirbase
          Length = 155

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 103 tcccgccttgcatcaactgaatcgga 128
           ||||||||||||||||||||||||||
Sbjct: 108 tcccgccttgcatcaactgaatcgga 133



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 20 attcgcttggtgcaggtcgggaac 43
          ||||||||||||||||||||||||
Sbjct: 22 attcgcttggtgcaggtcgggaac 45




>42742_zma-MIR168b:mirbase
          Length = 104

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 103 tcccgccttgcatcaactgaatcggagcc 131
           |||||||||||||||| ||||||||||||
Sbjct: 66  tcccgccttgcatcaagtgaatcggagcc 94




>40271_bna-MIR168:mirbase
          Length = 133

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                               
Query: 8  cggcggtctctaattcgcttggtgcaggtcgggaact 44
          |||||| |||| | |||||||||||||||||||||||
Sbjct: 4  cggcggcctctgactcgcttggtgcaggtcgggaact 40




>42741_zma-MIR168a:mirbase
          Length = 104

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 103 tcccgccttgcatcaactgaatcggagcccgcgg 136
           |||||||||||| ||| |||||||||||| ||||
Sbjct: 66  tcccgccttgcaccaagtgaatcggagccggcgg 99




>42470_ssp-MIR168a:mirbase
          Length = 99

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 103 tcccgccttgcatcaactgaatcggagcc 131
           |||||||||||| ||| ||||||||||||
Sbjct: 63  tcccgccttgcaccaagtgaatcggagcc 91




>42460_sof-MIR168b:mirbase
          Length = 103

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 103 tcccgccttgcatcaactgaatcggagcc 131
           |||||||||||| ||| ||||||||||||
Sbjct: 65  tcccgccttgcaccaagtgaatcggagcc 93




>42459_sof-MIR168a:mirbase
          Length = 104

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 103 tcccgccttgcatcaactgaatcggagcc 131
           |||||||||||| ||| ||||||||||||
Sbjct: 66  tcccgccttgcaccaagtgaatcggagcc 94




>41962_osa-MIR168a:mirbase
          Length = 87

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 103 tcccgccttgcatcaactgaatcggagcc 131
           |||||||||||| ||| ||||||||||||
Sbjct: 58  tcccgccttgcaccaagtgaatcggagcc 86




>41961_osa-MIR168a:mirbase
          Length = 87

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 103 tcccgccttgcatcaactgaatcggagcc 131
           |||||||||||| ||| ||||||||||||
Sbjct: 58  tcccgccttgcaccaagtgaatcggagcc 86




>41888_hvu-MIR168:mirbase
          Length = 106

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 103 tcccgccttgcatcaactgaatcggagcc 131
           |||||||||||| ||| ||||||||||||
Sbjct: 69  tcccgccttgcaccaagtgaatcggagcc 97




>41887_hvu-MIR168:mirbase
          Length = 106

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 103 tcccgccttgcatcaactgaatcggagcc 131
           |||||||||||| ||| ||||||||||||
Sbjct: 69  tcccgccttgcaccaagtgaatcggagcc 97




>41753_bdi-MIR168:mirbase
          Length = 136

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 103 tcccgccttgcatcaactgaatcggagcc 131
           |||||||||||| ||| ||||||||||||
Sbjct: 78  tcccgccttgcaccaagtgaatcggagcc 106