miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>40359_rco-MIR171a:mirbase
          Length = 92

 Score = 69.9 bits (35), Expect = 4e-13
 Identities = 35/35 (100%)
 Strand = Plus / Plus

                                              
Query: 75  tgctttttgattgagccgtgccaatatcacgtgca 109
           |||||||||||||||||||||||||||||||||||
Sbjct: 57  tgctttttgattgagccgtgccaatatcacgtgca 91




>41216_crt-MIR171:mirbase
          Length = 201

 Score = 65.9 bits (33), Expect = 7e-12
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                            
Query: 76  gctttttgattgagccgtgccaatatcacgtgc 108
           |||||||||||||||||||||||||||||||||
Sbjct: 155 gctttttgattgagccgtgccaatatcacgtgc 187




>40360_rco-MIR171b:mirbase
          Length = 91

 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                          
Query: 80  tttgattgagccgtgccaatatcacgtgcat 110
           |||||||||||||||||||||||||||||||
Sbjct: 61  tttgattgagccgtgccaatatcacgtgcat 91




>41624_vvi-MIR171c:mirbase
          Length = 103

 Score = 60.0 bits (30), Expect = 4e-10
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                         
Query: 78  tttttgattgagccgtgccaatatcacgtg 107
           ||||||||||||||||||||||||||||||
Sbjct: 66  tttttgattgagccgtgccaatatcacgtg 95




>41231_csi-MIR171a:mirbase
          Length = 97

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                            
Query: 76  gctttttgattgagccgtgccaatatcacgtgc 108
           ||||||||||||||||| |||||||||||||||
Sbjct: 61  gctttttgattgagccgcgccaatatcacgtgc 93




>41211_ccl-MIR171:mirbase
          Length = 321

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                            
Query: 76  gctttttgattgagccgtgccaatatcacgtgc 108
           ||||||||||||||||| |||||||||||||||
Sbjct: 116 gctttttgattgagccgcgccaatatcacgtgc 148




>41982_osa-MIR171b:mirbase
          Length = 100

 Score = 56.0 bits (28), Expect = 6e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 79  ttttgattgagccgtgccaatatcacgt 106
           ||||||||||||||||||||||||||||
Sbjct: 67  ttttgattgagccgtgccaatatcacgt 94




>40700_mtr-MIR171f:mirbase
          Length = 95

 Score = 56.0 bits (28), Expect = 6e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 80  tttgattgagccgtgccaatatcacgtg 107
           ||||||||||||||||||||||||||||
Sbjct: 65  tttgattgagccgtgccaatatcacgtg 92




>39851_aly-MIR171c:mirbase
          Length = 111

 Score = 56.0 bits (28), Expect = 6e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 80  tttgattgagccgtgccaatatcacgtg 107
           ||||||||||||||||||||||||||||
Sbjct: 72  tttgattgagccgtgccaatatcacgtg 99




>42556_sbi-MIR171k:mirbase
          Length = 87

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 80  tttgattgagccgtgccaatatcacgt 106
           |||||||||||||||||||||||||||
Sbjct: 60  tttgattgagccgtgccaatatcacgt 86




>41983_osa-MIR171c:mirbase
          Length = 99

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 80  tttgattgagccgtgccaatatcacgt 106
           |||||||||||||||||||||||||||
Sbjct: 67  tttgattgagccgtgccaatatcacgt 93




>41625_vvi-MIR171d:mirbase
          Length = 100

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 80  tttgattgagccgtgccaatatcacgt 106
           |||||||||||||||||||||||||||
Sbjct: 65  tttgattgagccgtgccaatatcacgt 91




>41540_sly-MIR171c:mirbase
          Length = 121

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 77  ctttttgattgagccgtgccaatatcacgtg 107
           |||||||||||||||| ||||||||||||||
Sbjct: 73  ctttttgattgagccgcgccaatatcacgtg 103




>41382_ptc-MIR171b:mirbase
          Length = 103

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 80  tttgattgagccgtgccaatatcacgt 106
           |||||||||||||||||||||||||||
Sbjct: 69  tttgattgagccgtgccaatatcacgt 95




>41381_ptc-MIR171a:mirbase
          Length = 104

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 80  tttgattgagccgtgccaatatcacgt 106
           |||||||||||||||||||||||||||
Sbjct: 70  tttgattgagccgtgccaatatcacgt 96




>41121_tcc-MIR171f:mirbase
          Length = 117

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 80  tttgattgagccgtgccaatatcacgt 106
           |||||||||||||||||||||||||||
Sbjct: 75  tttgattgagccgtgccaatatcacgt 101




>41119_tcc-MIR171d:mirbase
          Length = 117

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 80  tttgattgagccgtgccaatatcacgt 106
           |||||||||||||||||||||||||||
Sbjct: 75  tttgattgagccgtgccaatatcacgt 101




>42762_zma-MIR171b:mirbase
          Length = 85

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 80  tttgattgagccgtgccaatatcacg 105
           ||||||||||||||||||||||||||
Sbjct: 60  tttgattgagccgtgccaatatcacg 85




>40318_bra-MIR171a:mirbase
          Length = 85

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 80  tttgattgagccgtgccaatatcacg 105
           ||||||||||||||||||||||||||
Sbjct: 60  tttgattgagccgtgccaatatcacg 85




>40305_bol-MIR171a:mirbase
          Length = 96

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 80  tttgattgagccgtgccaatatcacg 105
           ||||||||||||||||||||||||||
Sbjct: 66  tttgattgagccgtgccaatatcacg 91




>40289_bna-MIR171e:mirbase
          Length = 92

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 80  tttgattgagccgtgccaatatcacg 105
           ||||||||||||||||||||||||||
Sbjct: 65  tttgattgagccgtgccaatatcacg 90




>40288_bna-MIR171d:mirbase
          Length = 96

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 80  tttgattgagccgtgccaatatcacg 105
           ||||||||||||||||||||||||||
Sbjct: 66  tttgattgagccgtgccaatatcacg 91




>40062_ath-MIR171c:mirbase
          Length = 116

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 80  tttgattgagccgtgccaatatcacg 105
           ||||||||||||||||||||||||||
Sbjct: 85  tttgattgagccgtgccaatatcacg 110




>42770_zma-MIR171j:mirbase
          Length = 129

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 82  tgattgagccgtgccaatatcacgt 106
           |||||||||||||||||||||||||
Sbjct: 90  tgattgagccgtgccaatatcacgt 114




>42547_sbi-MIR171b:mirbase
          Length = 132

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 82  tgattgagccgtgccaatatcacgt 106
           |||||||||||||||||||||||||
Sbjct: 93  tgattgagccgtgccaatatcacgt 117




>42546_sbi-MIR171a:mirbase
          Length = 161

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 80  tttgattgagccgtgccaatatcac 104
           |||||||||||||||||||||||||
Sbjct: 120 tttgattgagccgtgccaatatcac 144




>41766_bdi-MIR171c:mirbase
          Length = 86

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 80  tttgattgagccgtgccaatatcac 104
           |||||||||||||||||||||||||
Sbjct: 62  tttgattgagccgtgccaatatcac 86




>40457_gma-MIR171c:mirbase
          Length = 104

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 80  tttgattgagccgtgccaatatcac 104
           |||||||||||||||||||||||||
Sbjct: 70  tttgattgagccgtgccaatatcac 94




>42769_zma-MIR171i:mirbase
          Length = 104

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 81  ttgattgagccgtgccaatatcac 104
           ||||||||||||||||||||||||
Sbjct: 64  ttgattgagccgtgccaatatcac 87




>42766_zma-MIR171f:mirbase
          Length = 155

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 81  ttgattgagccgtgccaatatcac 104
           ||||||||||||||||||||||||
Sbjct: 114 ttgattgagccgtgccaatatcac 137




>41180_aqc-MIR171d:mirbase
          Length = 106

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 79  ttttgattgagccgtgccaatatc 102
           ||||||||||||||||||||||||
Sbjct: 81  ttttgattgagccgtgccaatatc 104




>41120_tcc-MIR171e:mirbase
          Length = 161

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 79  ttttgattgagccgtgccaatatc 102
           ||||||||||||||||||||||||
Sbjct: 118 ttttgattgagccgtgccaatatc 141




>40454_gma-MIR171a:mirbase
          Length = 102

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 78  tttttgattgagccgtgccaatatcacg 105
           ||||| ||||||||||||||||||||||
Sbjct: 64  tttttcattgagccgtgccaatatcacg 91




>40364_rco-MIR171f:mirbase
          Length = 111

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 79  ttttgattgagccgtgccaatatc 102
           ||||||||||||||||||||||||
Sbjct: 83  ttttgattgagccgtgccaatatc 106




>42763_zma-MIR171c:mirbase
          Length = 118

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 80  tttgattgagccgtgccaatatcacgt 106
           ||||| |||||||||||||||||||||
Sbjct: 77  tttgactgagccgtgccaatatcacgt 103




>42641_tae-MIR171b:mirbase
          Length = 138

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 83  gattgagccgtgccaatatcacg 105
           |||||||||||||||||||||||
Sbjct: 90  gattgagccgtgccaatatcacg 112




>41986_osa-MIR171f:mirbase
          Length = 127

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 82  tgattgagccgtgccaatatcac 104
           |||||||||||||||||||||||
Sbjct: 97  tgattgagccgtgccaatatcac 119




>41539_sly-MIR171b:mirbase
          Length = 86

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 84  attgagccgtgccaatatcacgt 106
           |||||||||||||||||||||||
Sbjct: 64  attgagccgtgccaatatcacgt 86




>41538_sly-MIR171a:mirbase
          Length = 122

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 80  tttgattgagccgtgccaatatc 102
           |||||||||||||||||||||||
Sbjct: 85  tttgattgagccgtgccaatatc 107




>41389_ptc-MIR171i:mirbase
          Length = 129

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 80  tttgattgagccgtgccaatatc 102
           |||||||||||||||||||||||
Sbjct: 98  tttgattgagccgtgccaatatc 120




>41388_ptc-MIR171h:mirbase
          Length = 100

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 82  tgattgagccgtgccaatatcac 104
           |||||||||||||||||||||||
Sbjct: 71  tgattgagccgtgccaatatcac 93




>41387_ptc-MIR171g:mirbase
          Length = 100

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 82  tgattgagccgtgccaatatcac 104
           |||||||||||||||||||||||
Sbjct: 71  tgattgagccgtgccaatatcac 93




>41182_aqc-MIR171f:mirbase
          Length = 88

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 84  attgagccgtgccaatatcacgt 106
           |||||||||||||||||||||||
Sbjct: 64  attgagccgtgccaatatcacgt 86




>41181_aqc-MIR171e:mirbase
          Length = 102

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 80  tttgattgagccgtgccaatatc 102
           |||||||||||||||||||||||
Sbjct: 23  tttgattgagccgtgccaatatc 1




>41178_aqc-MIR171b:mirbase
          Length = 77

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 82  tgattgagccgtgccaatatcac 104
           |||||||||||||||||||||||
Sbjct: 55  tgattgagccgtgccaatatcac 77




>41177_aqc-MIR171a:mirbase
          Length = 102

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 80  tttgattgagccgtgccaatatc 102
           |||||||||||||||||||||||
Sbjct: 78  tttgattgagccgtgccaatatc 100




>41122_tcc-MIR171g:mirbase
          Length = 115

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 82  tgattgagccgtgccaatatcac 104
           |||||||||||||||||||||||
Sbjct: 75  tgattgagccgtgccaatatcac 97




>40701_mtr-MIR171g:mirbase
          Length = 105

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 80  tttgattgagccgtgccaatatc 102
           |||||||||||||||||||||||
Sbjct: 78  tttgattgagccgtgccaatatc 100




>40698_mtr-MIR171d:mirbase
          Length = 105

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 80  tttgattgagccgtgccaatatc 102
           |||||||||||||||||||||||
Sbjct: 78  tttgattgagccgtgccaatatc 100




>40697_mtr-MIR171c:mirbase
          Length = 105

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 79  ttttgattgagccgtgccaatat 101
           |||||||||||||||||||||||
Sbjct: 77  ttttgattgagccgtgccaatat 99




>40362_rco-MIR171d:mirbase
          Length = 124

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 80  tttgattgagccgtgccaatatc 102
           |||||||||||||||||||||||
Sbjct: 97  tttgattgagccgtgccaatatc 119




>40321_bra-MIR171d:mirbase
          Length = 101

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 83  gattgagccgtgccaatatcacg 105
           |||||||||||||||||||||||
Sbjct: 71  gattgagccgtgccaatatcacg 93




>40320_bra-MIR171c:mirbase
          Length = 88

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 83  gattgagccgtgccaatatcacg 105
           |||||||||||||||||||||||
Sbjct: 65  gattgagccgtgccaatatcacg 87




>40319_bra-MIR171b:mirbase
          Length = 104

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 83  gattgagccgtgccaatatcacg 105
           |||||||||||||||||||||||
Sbjct: 72  gattgagccgtgccaatatcacg 94




>40287_bna-MIR171c:mirbase
          Length = 88

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 83  gattgagccgtgccaatatcacg 105
           |||||||||||||||||||||||
Sbjct: 65  gattgagccgtgccaatatcacg 87




>40286_bna-MIR171b:mirbase
          Length = 101

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 83  gattgagccgtgccaatatcacg 105
           |||||||||||||||||||||||
Sbjct: 71  gattgagccgtgccaatatcacg 93




>40285_bna-MIR171a:mirbase
          Length = 104

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 83  gattgagccgtgccaatatcacg 105
           |||||||||||||||||||||||
Sbjct: 72  gattgagccgtgccaatatcacg 94




>40061_ath-MIR171b:mirbase
          Length = 117

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 83  gattgagccgtgccaatatcacg 105
           |||||||||||||||||||||||
Sbjct: 76  gattgagccgtgccaatatcacg 98




>39850_aly-MIR171b:mirbase
          Length = 137

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 83  gattgagccgtgccaatatcacg 105
           |||||||||||||||||||||||
Sbjct: 87  gattgagccgtgccaatatcacg 109




>41630_vvi-MIR171i:mirbase
          Length = 103

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 82  tgattgagccgtgccaatatca 103
           ||||||||||||||||||||||
Sbjct: 69  tgattgagccgtgccaatatca 90




>41622_vvi-MIR171a:mirbase
          Length = 99

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 82  tgattgagccgtgccaatatca 103
           ||||||||||||||||||||||
Sbjct: 68  tgattgagccgtgccaatatca 89




>39736_smo-MIR171a:mirbase
          Length = 135

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 83  gattgagccgtgccaatatcac 104
           ||||||||||||||||||||||
Sbjct: 103 gattgagccgtgccaatatcac 124