miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36106_dan-mir-100:mirbase
Length = 82
Score = 81.8 bits (41), Expect = 6e-17
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 9 acccgtaaatccgaacttgtgctatatgctaattgttacaagaccggcattatgggagtc 68
||||||||||||||||||||||| | | || |||||||||||||||||||||||||||
Sbjct: 13 acccgtaaatccgaacttgtgctgttttttatctgttacaagaccggcattatgggagtc 72
Query: 69 tgtca 73
|||||
Sbjct: 73 tgtca 77
>36184_der-mir-100:mirbase
Length = 82
Score = 81.8 bits (41), Expect = 6e-17
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 9 acccgtaaatccgaacttgtgctatatgctaattgttacaagaccggcattatgggagtc 68
||||||||||||||||||||||| | | || |||||||||||||||||||||||||||
Sbjct: 13 acccgtaaatccgaacttgtgctgttttatatctgttacaagaccggcattatgggagtc 72
Query: 69 tgtca 73
|||||
Sbjct: 73 tgtca 77
>36272_dgr-mir-100:mirbase
Length = 82
Score = 81.8 bits (41), Expect = 6e-17
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 9 acccgtaaatccgaacttgtgctatatgctaattgttacaagaccggcattatgggagtc 68
||||||||||||||||||||||| | | || |||||||||||||||||||||||||||
Sbjct: 13 acccgtaaatccgaacttgtgctgttttttatctgttacaagaccggcattatgggagtc 72
Query: 69 tgtca 73
|||||
Sbjct: 73 tgtca 77
>36383_dme-mir-100:mirbase
Length = 100
Score = 81.8 bits (41), Expect = 6e-17
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 9 acccgtaaatccgaacttgtgctatatgctaattgttacaagaccggcattatgggagtc 68
||||||||||||||||||||||| | | || |||||||||||||||||||||||||||
Sbjct: 13 acccgtaaatccgaacttgtgctgttttatatctgttacaagaccggcattatgggagtc 72
Query: 69 tgtca 73
|||||
Sbjct: 73 tgtca 77
>36384_dme-mir-100:mirbase
Length = 100
Score = 81.8 bits (41), Expect = 6e-17
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 9 acccgtaaatccgaacttgtgctatatgctaattgttacaagaccggcattatgggagtc 68
||||||||||||||||||||||| | | || |||||||||||||||||||||||||||
Sbjct: 13 acccgtaaatccgaacttgtgctgttttatatctgttacaagaccggcattatgggagtc 72
Query: 69 tgtca 73
|||||
Sbjct: 73 tgtca 77
>36782_dmo-mir-100:mirbase
Length = 82
Score = 81.8 bits (41), Expect = 6e-17
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 9 acccgtaaatccgaacttgtgctatatgctaattgttacaagaccggcattatgggagtc 68
||||||||||||||||||||||| | | || |||||||||||||||||||||||||||
Sbjct: 13 acccgtaaatccgaacttgtgctgttttatatctgttacaagaccggcattatgggagtc 72
Query: 69 tgtca 73
|||||
Sbjct: 73 tgtca 77
>37144_dse-mir-100:mirbase
Length = 82
Score = 81.8 bits (41), Expect = 6e-17
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 9 acccgtaaatccgaacttgtgctatatgctaattgttacaagaccggcattatgggagtc 68
||||||||||||||||||||||| | | || |||||||||||||||||||||||||||
Sbjct: 13 acccgtaaatccgaacttgtgctgttttatatctgttacaagaccggcattatgggagtc 72
Query: 69 tgtca 73
|||||
Sbjct: 73 tgtca 77
>37219_dsi-mir-100:mirbase
Length = 82
Score = 81.8 bits (41), Expect = 6e-17
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 9 acccgtaaatccgaacttgtgctatatgctaattgttacaagaccggcattatgggagtc 68
||||||||||||||||||||||| | | || |||||||||||||||||||||||||||
Sbjct: 13 acccgtaaatccgaacttgtgctgttttatatctgttacaagaccggcattatgggagtc 72
Query: 69 tgtca 73
|||||
Sbjct: 73 tgtca 77
>37358_dvi-mir-100:mirbase
Length = 82
Score = 81.8 bits (41), Expect = 6e-17
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 9 acccgtaaatccgaacttgtgctatatgctaattgttacaagaccggcattatgggagtc 68
||||||||||||||||||||||| | | || |||||||||||||||||||||||||||
Sbjct: 13 acccgtaaatccgaacttgtgctgttttatatctgttacaagaccggcattatgggagtc 72
Query: 69 tgtca 73
|||||
Sbjct: 73 tgtca 77
>37437_dwi-mir-100:mirbase
Length = 82
Score = 81.8 bits (41), Expect = 6e-17
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 9 acccgtaaatccgaacttgtgctatatgctaattgttacaagaccggcattatgggagtc 68
||||||||||||||||||||||| | | || |||||||||||||||||||||||||||
Sbjct: 13 acccgtaaatccgaacttgtgctgttttatatctgttacaagaccggcattatgggagtc 72
Query: 69 tgtca 73
|||||
Sbjct: 73 tgtca 77
>37512_dya-mir-100:mirbase
Length = 82
Score = 81.8 bits (41), Expect = 6e-17
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 9 acccgtaaatccgaacttgtgctatatgctaattgttacaagaccggcattatgggagtc 68
||||||||||||||||||||||| | | || |||||||||||||||||||||||||||
Sbjct: 13 acccgtaaatccgaacttgtgctgttttatatctgttacaagaccggcattatgggagtc 72
Query: 69 tgtca 73
|||||
Sbjct: 73 tgtca 77
>36855_dpe-mir-100-1:mirbase
Length = 82
Score = 73.8 bits (37), Expect = 1e-14
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 9 acccgtaaatccgaacttgtgctatatgctaattgttacaagaccggcattatgggagtc 68
|||||||| |||||||||||||| | | || |||||||||||||||||||||||||||
Sbjct: 13 acccgtaattccgaacttgtgctgttttatatctgttacaagaccggcattatgggagtc 72
Query: 69 tgtca 73
|||||
Sbjct: 73 tgtca 77
>36856_dpe-mir-100-2:mirbase
Length = 82
Score = 73.8 bits (37), Expect = 1e-14
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 9 acccgtaaatccgaacttgtgctatatgctaattgttacaagaccggcattatgggagtc 68
|||||||| |||||||||||||| | | || |||||||||||||||||||||||||||
Sbjct: 13 acccgtaattccgaacttgtgctgttttatatctgttacaagaccggcattatgggagtc 72
Query: 69 tgtca 73
|||||
Sbjct: 73 tgtca 77
>36932_dps-mir-100:mirbase
Length = 100
Score = 73.8 bits (37), Expect = 1e-14
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 9 acccgtaaatccgaacttgtgctatatgctaattgttacaagaccggcattatgggagtc 68
|||||||| |||||||||||||| | | || |||||||||||||||||||||||||||
Sbjct: 13 acccgtaattccgaacttgtgctgttttatatctgttacaagaccggcattatgggagtc 72
Query: 69 tgtca 73
|||||
Sbjct: 73 tgtca 77
>25755_xtr-mir-100:mirbase
Length = 76
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 acccgtaaatccgaacttgtgct 31
||||||| |||||||||||||||
Sbjct: 11 acccgtagatccgaacttgtgct 33
>26440_tgu-mir-100-1:mirbase
Length = 111
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 acccgtaaatccgaacttgtgct 31
||||||| |||||||||||||||
Sbjct: 12 acccgtagatccgaacttgtgct 34
>26441_tgu-mir-100-2:mirbase
Length = 111
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 acccgtaaatccgaacttgtgct 31
||||||| |||||||||||||||
Sbjct: 12 acccgtagatccgaacttgtgct 34
>31827_mmu-mir-100:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 acccgtaaatccgaacttgtgct 31
||||||| |||||||||||||||
Sbjct: 14 acccgtagatccgaacttgtgct 36
>32708_rno-mir-100:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 acccgtaaatccgaacttgtgct 31
||||||| |||||||||||||||
Sbjct: 14 acccgtagatccgaacttgtgct 36
>33958_ssc-mir-100:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 acccgtaaatccgaacttgtgct 31
||||||| |||||||||||||||
Sbjct: 17 acccgtagatccgaacttgtgct 39
>35190_aae-mir-100:mirbase
Length = 126
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 acccgtaaatccgaacttgtgct 31
||||||| |||||||||||||||
Sbjct: 32 acccgtagatccgaacttgtgct 54
>35288_aga-mir-100:mirbase
Length = 92
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 acccgtaaatccgaacttgtgct 31
||||||| |||||||||||||||
Sbjct: 16 acccgtagatccgaacttgtgct 38
>36020_cqu-mir-100:mirbase
Length = 110
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 acccgtaaatccgaacttgtgct 31
||||||| |||||||||||||||
Sbjct: 24 acccgtagatccgaacttgtgct 46
