miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41929_osa-MIR162a:mirbase
          Length = 171

 Score = 60.0 bits (30), Expect = 6e-10
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                         
Query: 113 ggaatcgatcgataaacctctgcatccagt 142
           ||||||||||||||||||||||||||||||
Sbjct: 135 ggaatcgatcgataaacctctgcatccagt 164




>42502_sbi-MIR162:mirbase
          Length = 127

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                        
Query: 113 ggaatcgatcgataaacctctgcatccag 141
           |||||||||||||||||||||||||||||
Sbjct: 99  ggaatcgatcgataaacctctgcatccag 127




>41530_sly-MIR162:mirbase
          Length = 99

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                            
Query: 109 aaaaggaatcgatcgataaacctctgcatccag 141
           ||||||||||| |||||||||||||||||||||
Sbjct: 67  aaaaggaatcggtcgataaacctctgcatccag 99




>41220_csi-MIR162:mirbase
          Length = 201

 Score = 56.0 bits (28), Expect = 9e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 114 gaatcgatcgataaacctctgcatccag 141
           ||||||||||||||||||||||||||||
Sbjct: 154 gaatcgatcgataaacctctgcatccag 181




>41046_ghr-MIR162a:mirbase
          Length = 148

 Score = 56.0 bits (28), Expect = 9e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 114 gaatcgatcgataaacctctgcatccag 141
           ||||||||||||||||||||||||||||
Sbjct: 87  gaatcgatcgataaacctctgcatccag 114




>40663_mtr-MIR162:mirbase
          Length = 124

 Score = 56.0 bits (28), Expect = 9e-09
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                          
Query: 28 tcactggattcagcggttcatcgatctgttcc 59
          ||||||||| ||||||||||||||||||||||
Sbjct: 18 tcactggatgcagcggttcatcgatctgttcc 49



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 114 gaatcgatcgataaacctctgcatccag 141
           |||||| |||||||||||||||||||||
Sbjct: 80  gaatcggtcgataaacctctgcatccag 107




>40437_gma-MIR162:mirbase
          Length = 102

 Score = 56.0 bits (28), Expect = 9e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 114 gaatcgatcgataaacctctgcatccag 141
           ||||||||||||||||||||||||||||
Sbjct: 66  gaatcgatcgataaacctctgcatccag 93



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                          
Query: 28 tcactggattcagcggttcatcgatctgttcc 59
          ||||||||| ||||||||||||||||| ||||
Sbjct: 7  tcactggatgcagcggttcatcgatctcttcc 38




>40342_rco-MIR162:mirbase
          Length = 101

 Score = 56.0 bits (28), Expect = 9e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 114 gaatcgatcgataaacctctgcatccag 141
           ||||||||||||||||||||||||||||
Sbjct: 69  gaatcgatcgataaacctctgcatccag 96



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                          
Query: 28 tcactggattcagcggttcatcgatctgttcc 59
          ||||||||  ||||||||||||||||| ||||
Sbjct: 1  tcactggaggcagcggttcatcgatctcttcc 32




>40329_cpa-MIR162a:mirbase
          Length = 109

 Score = 56.0 bits (28), Expect = 9e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 114 gaatcgatcgataaacctctgcatccag 141
           ||||||||||||||||||||||||||||
Sbjct: 73  gaatcgatcgataaacctctgcatccag 100



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                          
Query: 28 tcactggattcagcggttcatcgatctgttcc 59
          ||||||||  ||||||||||||||||| ||||
Sbjct: 10 tcactggaggcagcggttcatcgatctcttcc 41




>40025_ath-MIR162b:mirbase
          Length = 111

 Score = 56.0 bits (28), Expect = 9e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 114 gaatcgatcgataaacctctgcatccag 141
           ||||||||||||||||||||||||||||
Sbjct: 72  gaatcgatcgataaacctctgcatccag 99




>39813_aly-MIR162b:mirbase
          Length = 184

 Score = 56.0 bits (28), Expect = 9e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 114 gaatcgatcgataaacctctgcatccag 141
           ||||||||||||||||||||||||||||
Sbjct: 106 gaatcgatcgataaacctctgcatccag 133




>41736_bdi-MIR162:mirbase
          Length = 133

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 113 ggaatcgatcgataaacctctgcatcc 139
           |||||||||||||||||||||||||||
Sbjct: 103 ggaatcgatcgataaacctctgcatcc 129




>41930_osa-MIR162b:mirbase
          Length = 134

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 112 aggaatcgatcgataaacctctgcatccag 141
           |||||||||||||||| |||||||||||||
Sbjct: 95  aggaatcgatcgataagcctctgcatccag 124




>41315_ptc-MIR162c:mirbase
          Length = 107

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 118 cgatcgataaacctctgcatccagtg 143
           ||||||||||||||||||||||||||
Sbjct: 75  cgatcgataaacctctgcatccagtg 100




>41314_ptc-MIR162b:mirbase
          Length = 107

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 118 cgatcgataaacctctgcatccagtg 143
           ||||||||||||||||||||||||||
Sbjct: 75  cgatcgataaacctctgcatccagtg 100




>42708_zma-MIR162:mirbase
          Length = 130

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 113 ggaatcgatcgataaacctctgcatccag 141
           ||||||| |||||||||||||||||||||
Sbjct: 102 ggaatcggtcgataaacctctgcatccag 130




>41578_vvi-MIR162:mirbase
          Length = 103

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 114 gaatcgatcgataaacctctgcatccagtgttc 146
           |||||| ||||||||||||||||||||| ||||
Sbjct: 66  gaatcggtcgataaacctctgcatccagcgttc 98



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                          
Query: 28 tcactggattcagcggttcatcgatctgttcc 59
          ||||||||| ||||||||||||||||| ||||
Sbjct: 6  tcactggatgcagcggttcatcgatctcttcc 37




>41090_tcc-MIR162:mirbase
          Length = 131

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 117 tcgatcgataaacctctgcatccag 141
           |||||||||||||||||||||||||
Sbjct: 87  tcgatcgataaacctctgcatccag 111




>41313_ptc-MIR162a:mirbase
          Length = 107

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 118 cgatcgataaacctctgcatccag 141
           ||||||||||||||||||||||||
Sbjct: 75  cgatcgataaacctctgcatccag 98




>40024_ath-MIR162a:mirbase
          Length = 140

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 114 gaatcgatcgataaacctctgcatccag 141
           |||| |||||||||||||||||||||||
Sbjct: 82  gaatagatcgataaacctctgcatccag 109




>39812_aly-MIR162a:mirbase
          Length = 228

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 114 gaatcgatcgataaacctctgcatccag 141
           |||| |||||||||||||||||||||||
Sbjct: 129 gaatagatcgataaacctctgcatccag 156