miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>31236_ppy-mir-675b:mirbase
          Length = 95

 Score =  161 bits (81), Expect = 1e-40
 Identities = 90/93 (96%)
 Strand = Plus / Plus

                                                                      
Query: 1  aggcactgcggcccagggtctggtgcggagagggccaacagtggacttggtgacactgta 60
          |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 3  aggcactgcggcccagggtctggtgcggagagggcccacagtggacttggtgacgctgta 62

                                           
Query: 61 tgccctcaccgctcagcctctggggctggcttg 93
          |||||||||||||||||| ||||||||||||||
Sbjct: 63 tgccctcaccgctcagcccctggggctggcttg 95




>28110_mml-mir-675:mirbase
          Length = 73

 Score =  129 bits (65), Expect = 4e-31
 Identities = 71/73 (97%)
 Strand = Plus / Plus

                                                                      
Query: 12 cccagggtctggtgcggagagggccaacagtggacttggtgacactgtatgccctcaccg 71
          ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1  cccagggtctggtgcggagagggcccacagtggacttggtgacactgtatgccctcaccg 60

                       
Query: 72 ctcagcctctggg 84
          ||||||| |||||
Sbjct: 61 ctcagcccctggg 73




>28990_hsa-mir-675:mirbase
          Length = 73

 Score =  121 bits (61), Expect = 9e-29
 Identities = 70/73 (95%)
 Strand = Plus / Plus

                                                                      
Query: 12 cccagggtctggtgcggagagggccaacagtggacttggtgacactgtatgccctcaccg 71
          ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 1  cccagggtctggtgcggagagggcccacagtggacttggtgacgctgtatgccctcaccg 60

                       
Query: 72 ctcagcctctggg 84
          ||||||| |||||
Sbjct: 61 ctcagcccctggg 73




>31235_ppy-mir-675a:mirbase
          Length = 73

 Score =  121 bits (61), Expect = 9e-29
 Identities = 70/73 (95%)
 Strand = Plus / Plus

                                                                      
Query: 12 cccagggtctggtgcggagagggccaacagtggacttggtgacactgtatgccctcaccg 71
          ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 1  cccagggtctggtgcggagagggcccacagtggacttggtgacgctgtatgccctcaccg 60

                       
Query: 72 ctcagcctctggg 84
          ||||||| |||||
Sbjct: 61 ctcagcccctggg 73




>32290_mmu-mir-675:mirbase
          Length = 84

 Score = 95.6 bits (48), Expect = 5e-21
 Identities = 76/84 (90%), Gaps = 1/84 (1%)
 Strand = Plus / Plus

                                                                      
Query: 7  tgcggcccagggtctggtgcggagagggccaacagtggacttggtgacactgtatgccct 66
          |||||||||||| |||||||||| |||||| |||||||||||||| ||||||||||||||
Sbjct: 1  tgcggcccagggactggtgcggaaagggcccacagtggacttggt-acactgtatgccct 59

                                  
Query: 67 caccgctcagcctctggggctggc 90
           ||||||||| | ||||| |||||
Sbjct: 60 aaccgctcagtccctgggtctggc 83




>32291_mmu-mir-675:mirbase
          Length = 84

 Score = 95.6 bits (48), Expect = 5e-21
 Identities = 76/84 (90%), Gaps = 1/84 (1%)
 Strand = Plus / Plus

                                                                      
Query: 7  tgcggcccagggtctggtgcggagagggccaacagtggacttggtgacactgtatgccct 66
          |||||||||||| |||||||||| |||||| |||||||||||||| ||||||||||||||
Sbjct: 1  tgcggcccagggactggtgcggaaagggcccacagtggacttggt-acactgtatgccct 59

                                  
Query: 67 caccgctcagcctctggggctggc 90
           ||||||||| | ||||| |||||
Sbjct: 60 aaccgctcagtccctgggtctggc 83




>32979_rno-mir-675:mirbase
          Length = 84

 Score = 95.6 bits (48), Expect = 5e-21
 Identities = 76/84 (90%), Gaps = 1/84 (1%)
 Strand = Plus / Plus

                                                                      
Query: 7  tgcggcccagggtctggtgcggagagggccaacagtggacttggtgacactgtatgccct 66
          |||||||||||| |||||||||| |||||| ||||||||||||||| |||||||||||||
Sbjct: 1  tgcggcccagggactggtgcggaaagggcccacagtggacttggtg-cactgtatgccct 59

                                  
Query: 67 caccgctcagcctctggggctggc 90
           ||||||||| | ||||| |||||
Sbjct: 60 aaccgctcagtccctgggtctggc 83




>27256_eca-mir-675:mirbase
          Length = 73

 Score = 81.8 bits (41), Expect = 8e-17
 Identities = 65/73 (89%)
 Strand = Plus / Plus

                                                                      
Query: 12 cccagggtctggtgcggagagggccaacagtggacttggtgacactgtatgccctcaccg 71
          ||||||| |||| |||||||||||| |||||| |||  ||||||||||||||| ||||||
Sbjct: 1  cccaggggctggcgcggagagggcccacagtgcactcagtgacactgtatgccttcaccg 60

                       
Query: 72 ctcagcctctggg 84
          ||||||| |||||
Sbjct: 61 ctcagcccctggg 73