miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42661_tae-MIR1128:mirbase
          Length = 190

 Score = 56.0 bits (28), Expect = 7e-09
 Identities = 69/82 (84%), Gaps = 3/82 (3%)
 Strand = Plus / Minus

                                                                       
Query: 53  atgtatttagacttattttagttatagatacattca---ttttattcatttctaggacaa 109
           |||||| ||||  |||||||||| ||||||||| |    ||||||||||||  | |||||
Sbjct: 115 atgtatctagatgtattttagttctagatacatccccttttttattcattttgatgacaa 56

                                 
Query: 110 gtattttcggacgcagggagta 131
           ||||||||||||| ||||||||
Sbjct: 55  gtattttcggacggagggagta 34



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 16 tactccctccgtccggaaatacttgt 41
          ||||||||||||||| ||||||||||
Sbjct: 34 tactccctccgtccgaaaatacttgt 59



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 16  tactccctccgtccggaaatacttgt 41
           ||||||||||||||||||||| ||||
Sbjct: 162 tactccctccgtccggaaatagttgt 137




>42668_tae-MIR1135:mirbase
          Length = 109

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                       
Query: 16  tactccctccgtccggaaatacttgttctagaaaatcatgtatttagacttattttagtt 75
           |||||||||||| ||||| |||||||   |||||   |||||| ||||| ||||||||||
Sbjct: 108 tactccctccgttcggaattacttgtcgcagaaatagatgtatctagacgtattttagtt 49

                     
Query: 76  atagatacat 85
            |||||||||
Sbjct: 48  ctagatacat 39




>42660_tae-MIR1127:mirbase
          Length = 150

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 13  atatactccctccgtccggaaatacttgt 41
           ||||||||||||||| ||||| |||||||
Sbjct: 137 atatactccctccgttcggaattacttgt 109