miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>35557_bmo-mir-281:mirbase
          Length = 77

 Score = 67.9 bits (34), Expect = 1e-12
 Identities = 56/62 (90%), Gaps = 1/62 (1%)
 Strand = Plus / Plus

                                                                      
Query: 13 aagagagctatccgtcgacagtactggagccaaacaactgtcatggagttgctctcttta 72
          ||||||||||||||||||||||| ||  |  ||||| |||||||||||||||||||||||
Sbjct: 11 aagagagctatccgtcgacagtattgctgataaaca-ctgtcatggagttgctctcttta 69

            
Query: 73 tg 74
          ||
Sbjct: 70 tg 71




>35026_dpu-mir-281:mirbase
          Length = 88

 Score = 52.0 bits (26), Expect = 6e-08
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                        
Query: 49 actgtcatggagttgctctctttatggaca 78
          |||||||||||| |||||||||||||||||
Sbjct: 59 actgtcatggagctgctctctttatggaca 88




>37566_lmi-mir-281:mirbase
          Length = 58

 Score = 52.0 bits (26), Expect = 6e-08
 Identities = 52/60 (86%), Gaps = 3/60 (5%)
 Strand = Plus / Plus

                                                                      
Query: 13 aagagagctatccgtcgacagtactggagccaaacaactgtcatggagttgctctcttta 72
          ||||||||||||||||||||||||   ||  |   |||||||||||||||||||||||||
Sbjct: 1  aagagagctatccgtcgacagtac---agtgagtaaactgtcatggagttgctctcttta 57




>35081_api-mir-281:mirbase
          Length = 62

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 49 actgtcatggagttgctctctttat 73
          |||||||||||||||||||||||||
Sbjct: 38 actgtcatggagttgctctctttat 62



 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 13 aagagagctatccgtcgacagta 35
          |||||||||||||||||||||||
Sbjct: 1  aagagagctatccgtcgacagta 23




>37781_tca-mir-281:mirbase
          Length = 67

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 49 actgtcatggagttgctctctttat 73
          |||||||||||||||||||||||||
Sbjct: 43 actgtcatggagttgctctctttat 67



 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 13 aagagagctatccgtcgacagta 35
          |||||||||||||||||||||||
Sbjct: 10 aagagagctatccgtcgacagta 32




>37782_tca-mir-281:mirbase
          Length = 67

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 49 actgtcatggagttgctctctttat 73
          |||||||||||||||||||||||||
Sbjct: 43 actgtcatggagttgctctctttat 67



 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 13 aagagagctatccgtcgacagta 35
          |||||||||||||||||||||||
Sbjct: 10 aagagagctatccgtcgacagta 32




>38884_lgi-mir-281:mirbase
          Length = 101

 Score = 48.1 bits (24), Expect = 9e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 49 actgtcatggagttgctctcttta 72
          ||||||||||||||||||||||||
Sbjct: 59 actgtcatggagttgctctcttta 82




>24703_bfl-mir-281:mirbase
          Length = 85

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 49 actgtcatggagttgctctcttt 71
          |||||||||||||||||||||||
Sbjct: 57 actgtcatggagttgctctcttt 79




>35210_aae-mir-281:mirbase
          Length = 97

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 13 aagagagctatccgtcgacagta 35
          |||||||||||||||||||||||
Sbjct: 21 aagagagctatccgtcgacagta 43



 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 49 actgtcatggagttgctctctttatg 74
          ||||||||||| ||||||||||||||
Sbjct: 56 actgtcatggaattgctctctttatg 81




>35305_aga-mir-281:mirbase
          Length = 102

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 13 aagagagctatccgtcgacagta 35
          |||||||||||||||||||||||
Sbjct: 20 aagagagctatccgtcgacagta 42



 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 49 actgtcatggagttgctctctttatg 74
          ||||||||||| ||||||||||||||
Sbjct: 55 actgtcatggaattgctctctttatg 80




>35386_ame-mir-281:mirbase
          Length = 103

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 49 actgtcatggagttgctctcttt 71
          |||||||||||||||||||||||
Sbjct: 59 actgtcatggagttgctctcttt 81



 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 8  ctatcaagagagctatccgtcgacagta 35
          |||| ||||||||||||| |||||||||
Sbjct: 17 ctataaagagagctatccatcgacagta 44




>36038_cqu-mir-281:mirbase
          Length = 107

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 13 aagagagctatccgtcgacagta 35
          |||||||||||||||||||||||
Sbjct: 26 aagagagctatccgtcgacagta 48



 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 49 actgtcatggagttgctctctttatg 74
          ||||||||||| ||||||||||||||
Sbjct: 61 actgtcatggaattgctctctttatg 86




>38774_cte-mir-281:mirbase
          Length = 102

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 51 tgtcatggagttgctctcttta 72
          ||||||||||||||||||||||
Sbjct: 62 tgtcatggagttgctctcttta 83




>24852_cin-mir-281:mirbase
          Length = 101

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 49 actgtcatggagttgctctctt 70
          ||||||||||||||||||||||
Sbjct: 64 actgtcatggagttgctctctt 85




>36124_dan-mir-281-2:mirbase
          Length = 94

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 13 aagagagctatccgtcgacagt 34
          ||||||||||||||||||||||
Sbjct: 15 aagagagctatccgtcgacagt 36



 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 49 actgtcatggagttgctctcttt 71
          ||||||||||| |||||||||||
Sbjct: 60 actgtcatggaattgctctcttt 82




>36202_der-mir-281-2:mirbase
          Length = 92

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 13 aagagagctatccgtcgacagt 34
          ||||||||||||||||||||||
Sbjct: 15 aagagagctatccgtcgacagt 36



 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 49 actgtcatggagttgctctcttt 71
          ||||||||||| |||||||||||
Sbjct: 58 actgtcatggaattgctctcttt 80




>36291_dgr-mir-281-2:mirbase
          Length = 93

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 13 aagagagctatccgtcgacagt 34
          ||||||||||||||||||||||
Sbjct: 15 aagagagctatccgtcgacagt 36



 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 49 actgtcatggagttgctctcttt 71
          ||||||||||| |||||||||||
Sbjct: 59 actgtcatggaattgctctcttt 81




>36426_dme-mir-281-2:mirbase
          Length = 92

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 13 aagagagctatccgtcgacagt 34
          ||||||||||||||||||||||
Sbjct: 15 aagagagctatccgtcgacagt 36



 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 49 actgtcatggagttgctctcttt 71
          ||||||||||| |||||||||||
Sbjct: 58 actgtcatggaattgctctcttt 80




>36427_dme-mir-281-2:mirbase
          Length = 92

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 13 aagagagctatccgtcgacagt 34
          ||||||||||||||||||||||
Sbjct: 15 aagagagctatccgtcgacagt 36



 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 49 actgtcatggagttgctctcttt 71
          ||||||||||| |||||||||||
Sbjct: 58 actgtcatggaattgctctcttt 80




>36799_dmo-mir-281-2:mirbase
          Length = 93

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 13 aagagagctatccgtcgacagt 34
          ||||||||||||||||||||||
Sbjct: 15 aagagagctatccgtcgacagt 36



 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 49 actgtcatggagttgctctcttt 71
          ||||||||||| |||||||||||
Sbjct: 59 actgtcatggaattgctctcttt 81




>36876_dpe-mir-281-2:mirbase
          Length = 91

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 13 aagagagctatccgtcgacagt 34
          ||||||||||||||||||||||
Sbjct: 15 aagagagctatccgtcgacagt 36



 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 49 actgtcatggagttgctctcttt 71
          ||||||||||| |||||||||||
Sbjct: 57 actgtcatggaattgctctcttt 79




>36956_dps-mir-281-2:mirbase
          Length = 91

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 13 aagagagctatccgtcgacagt 34
          ||||||||||||||||||||||
Sbjct: 15 aagagagctatccgtcgacagt 36



 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 49 actgtcatggagttgctctcttt 71
          ||||||||||| |||||||||||
Sbjct: 57 actgtcatggaattgctctcttt 79




>37162_dse-mir-281-2:mirbase
          Length = 92

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 13 aagagagctatccgtcgacagt 34
          ||||||||||||||||||||||
Sbjct: 15 aagagagctatccgtcgacagt 36



 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 49 actgtcatggagttgctctcttt 71
          ||||||||||| |||||||||||
Sbjct: 58 actgtcatggaattgctctcttt 80




>37376_dvi-mir-281-2:mirbase
          Length = 91

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 13 aagagagctatccgtcgacagt 34
          ||||||||||||||||||||||
Sbjct: 15 aagagagctatccgtcgacagt 36



 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 49 actgtcatggagttgctctcttt 71
          ||||||||||| |||||||||||
Sbjct: 57 actgtcatggaattgctctcttt 79




>37455_dwi-mir-281-2:mirbase
          Length = 97

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 13 aagagagctatccgtcgacagt 34
          ||||||||||||||||||||||
Sbjct: 15 aagagagctatccgtcgacagt 36



 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 49 actgtcatggagttgctctcttt 71
          ||||||||||| |||||||||||
Sbjct: 63 actgtcatggaattgctctcttt 85




>37531_dya-mir-281-2:mirbase
          Length = 92

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 13 aagagagctatccgtcgacagt 34
          ||||||||||||||||||||||
Sbjct: 15 aagagagctatccgtcgacagt 36



 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 49 actgtcatggagttgctctcttt 71
          ||||||||||| |||||||||||
Sbjct: 58 actgtcatggaattgctctcttt 80




>38122_bma-mir-281:mirbase
          Length = 91

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 47 caactgtcatggagttgctctcttta 72
          ||||||||||||| ||||||||||||
Sbjct: 49 caactgtcatggaattgctctcttta 74




>34895_sko-mir-281:mirbase
          Length = 101

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 50 ctgtcatggagttgctctctt 70
          |||||||||||||||||||||
Sbjct: 60 ctgtcatggagttgctctctt 80




>37589_ngi-mir-281:mirbase
          Length = 73

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                       
Query: 49 actgtcatggagttgctctctttatggac 77
          ||||||||||| ||||||||||| |||||
Sbjct: 45 actgtcatggacttgctctctttgtggac 73



 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 8  ctatcaagagagctatccgtcgacagta 35
          |||| ||||||||||||| |||||||||
Sbjct: 3  ctataaagagagctatccatcgacagta 30




>37620_nlo-mir-281:mirbase
          Length = 73

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                       
Query: 49 actgtcatggagttgctctctttatggac 77
          ||||||||||| ||||||||||| |||||
Sbjct: 45 actgtcatggacttgctctctttgtggac 73



 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 8  ctatcaagagagctatccgtcgacagta 35
          |||| ||||||||||||| |||||||||
Sbjct: 3  ctataaagagagctatccatcgacagta 30




>37663_nvi-mir-281:mirbase
          Length = 103

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                       
Query: 49 actgtcatggagttgctctctttatggac 77
          ||||||||||| ||||||||||| |||||
Sbjct: 59 actgtcatggacttgctctctttgtggac 87



 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 8  ctatcaagagagctatccgtcgacagta 35
          |||| ||||||||||||| |||||||||
Sbjct: 17 ctataaagagagctatccatcgacagta 44




>25337_csa-mir-281:mirbase
          Length = 102

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 50 ctgtcatggagttgctctct 69
          ||||||||||||||||||||
Sbjct: 65 ctgtcatggagttgctctct 84




>25536_pma-mir-281a:mirbase
          Length = 87

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 51 tgtcatggagttgctctctt 70
          ||||||||||||||||||||
Sbjct: 55 tgtcatggagttgctctctt 74




>36798_dmo-mir-281-1:mirbase
          Length = 88

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 48 aactgtcatggagttgctctcttt 71
          |||||||||||| |||||||||||
Sbjct: 53 aactgtcatggaattgctctcttt 76




>37454_dwi-mir-281-1:mirbase
          Length = 90

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 48 aactgtcatggagttgctctcttt 71
          |||||||||||| |||||||||||
Sbjct: 55 aactgtcatggaattgctctcttt 78




>36123_dan-mir-281-1:mirbase
          Length = 86

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 49 actgtcatggagttgctctcttt 71
          ||||||||||| |||||||||||
Sbjct: 52 actgtcatggaattgctctcttt 74




>36201_der-mir-281-1:mirbase
          Length = 90

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 49 actgtcatggagttgctctcttt 71
          ||||||||||| |||||||||||
Sbjct: 56 actgtcatggaattgctctcttt 78




>36290_dgr-mir-281-1:mirbase
          Length = 88

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 49 actgtcatggagttgctctcttt 71
          ||||||||||| |||||||||||
Sbjct: 54 actgtcatggaattgctctcttt 76




>36424_dme-mir-281-1:mirbase
          Length = 90

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 49 actgtcatggagttgctctcttt 71
          ||||||||||| |||||||||||
Sbjct: 56 actgtcatggaattgctctcttt 78




>36425_dme-mir-281-1:mirbase
          Length = 90

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 49 actgtcatggagttgctctcttt 71
          ||||||||||| |||||||||||
Sbjct: 56 actgtcatggaattgctctcttt 78




>36875_dpe-mir-281-1:mirbase
          Length = 88

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 49 actgtcatggagttgctctcttt 71
          ||||||||||| |||||||||||
Sbjct: 54 actgtcatggaattgctctcttt 76




>36955_dps-mir-281-1:mirbase
          Length = 88

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 49 actgtcatggagttgctctcttt 71
          ||||||||||| |||||||||||
Sbjct: 54 actgtcatggaattgctctcttt 76




>37161_dse-mir-281-1:mirbase
          Length = 90

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 49 actgtcatggagttgctctcttt 71
          ||||||||||| |||||||||||
Sbjct: 56 actgtcatggaattgctctcttt 78




>37238_dsi-mir-281:mirbase
          Length = 90

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 49 actgtcatggagttgctctcttt 71
          ||||||||||| |||||||||||
Sbjct: 56 actgtcatggaattgctctcttt 78




>37375_dvi-mir-281-1:mirbase
          Length = 88

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 49 actgtcatggagttgctctcttt 71
          ||||||||||| |||||||||||
Sbjct: 54 actgtcatggaattgctctcttt 76




>37530_dya-mir-281-1:mirbase
          Length = 90

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 49 actgtcatggagttgctctcttt 71
          ||||||||||| |||||||||||
Sbjct: 56 actgtcatggaattgctctcttt 78