miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>31757_mmu-let-7d:mirbase
          Length = 103

 Score =  176 bits (89), Expect = 2e-45
 Identities = 98/101 (97%)
 Strand = Plus / Plus

                                                                       
Query: 11  tgggttcctaggaagaggtagtaggttgcatagttttcgggcagggattttgcccacaag 70
           ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct: 3   tgggttcctaggaagaggtagtaggttgcatagttttagggcagagattttgcccacaag 62

                                                    
Query: 71  gaggtaactatacgacctgctgcctttcttagggccttatt 111
           ||| |||||||||||||||||||||||||||||||||||||
Sbjct: 63  gagttaactatacgacctgctgcctttcttagggccttatt 103




>33113_bta-let-7d:mirbase
          Length = 87

 Score =  172 bits (87), Expect = 4e-44
 Identities = 87/87 (100%)
 Strand = Plus / Plus

                                                                       
Query: 17  cctaggaagaggtagtaggttgcatagttttcgggcagggattttgcccacaaggaggta 76
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   cctaggaagaggtagtaggttgcatagttttcgggcagggattttgcccacaaggaggta 60

                                      
Query: 77  actatacgacctgctgcctttcttagg 103
           |||||||||||||||||||||||||||
Sbjct: 61  actatacgacctgctgcctttcttagg 87




>27634_mml-let-7d:mirbase
          Length = 87

 Score =  165 bits (83), Expect = 9e-42
 Identities = 86/87 (98%)
 Strand = Plus / Plus

                                                                       
Query: 17  cctaggaagaggtagtaggttgcatagttttcgggcagggattttgcccacaaggaggta 76
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1   cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggaggta 60

                                      
Query: 77  actatacgacctgctgcctttcttagg 103
           |||||||||||||||||||||||||||
Sbjct: 61  actatacgacctgctgcctttcttagg 87




>28344_hsa-let-7d:mirbase
          Length = 87

 Score =  165 bits (83), Expect = 9e-42
 Identities = 86/87 (98%)
 Strand = Plus / Plus

                                                                       
Query: 17  cctaggaagaggtagtaggttgcatagttttcgggcagggattttgcccacaaggaggta 76
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1   cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggaggta 60

                                      
Query: 77  actatacgacctgctgcctttcttagg 103
           |||||||||||||||||||||||||||
Sbjct: 61  actatacgacctgctgcctttcttagg 87




>30736_ppy-let-7d:mirbase
          Length = 87

 Score =  165 bits (83), Expect = 9e-42
 Identities = 86/87 (98%)
 Strand = Plus / Plus

                                                                       
Query: 17  cctaggaagaggtagtaggttgcatagttttcgggcagggattttgcccacaaggaggta 76
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1   cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggaggta 60

                                      
Query: 77  actatacgacctgctgcctttcttagg 103
           |||||||||||||||||||||||||||
Sbjct: 61  actatacgacctgctgcctttcttagg 87




>30131_ptr-let-7d:mirbase
          Length = 86

 Score =  163 bits (82), Expect = 4e-41
 Identities = 85/86 (98%)
 Strand = Plus / Plus

                                                                       
Query: 18  ctaggaagaggtagtaggttgcatagttttcgggcagggattttgcccacaaggaggtaa 77
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1   ctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggaggtaa 60

                                     
Query: 78  ctatacgacctgctgcctttcttagg 103
           ||||||||||||||||||||||||||
Sbjct: 61  ctatacgacctgctgcctttcttagg 86




>32643_rno-let-7d:mirbase
          Length = 98

 Score =  163 bits (82), Expect = 4e-41
 Identities = 94/98 (95%)
 Strand = Plus / Plus

                                                                       
Query: 11  tgggttcctaggaagaggtagtaggttgcatagttttcgggcagggattttgcccacaag 70
           |||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct: 1   tgggctcctaggaagaggtagtaggttgcatagttttagggcagagattttgcccacaag 60

                                                 
Query: 71  gaggtaactatacgacctgctgcctttcttagggcctt 108
           ||| ||||||||||||||||||||||||||||||||||
Sbjct: 61  gagttaactatacgacctgctgcctttcttagggcctt 98




>26932_eca-let-7d:mirbase
          Length = 87

 Score =  157 bits (79), Expect = 2e-39
 Identities = 85/87 (97%)
 Strand = Plus / Plus

                                                                       
Query: 17  cctaggaagaggtagtaggttgcatagttttcgggcagggattttgcccacaaggaggta 76
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 1   cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggagata 60

                                      
Query: 77  actatacgacctgctgcctttcttagg 103
           |||||||||||||||||||||||||||
Sbjct: 61  actatacgacctgctgcctttcttagg 87




>27322_mdo-let-7d:mirbase
          Length = 106

 Score =  157 bits (79), Expect = 2e-39
 Identities = 91/95 (95%)
 Strand = Plus / Plus

                                                                       
Query: 11  tgggttcctaggaagaggtagtaggttgcatagttttcgggcagggattttgcccacaag 70
           |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 3   tgggctcctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaag 62

                                              
Query: 71  gaggtaactatacgacctgctgcctttcttagggc 105
           ||| ||||||||| |||||||||||||||||||||
Sbjct: 63  gagttaactatacaacctgctgcctttcttagggc 97




>33099_rno-mir-3596b:mirbase
          Length = 95

 Score =  157 bits (79), Expect = 2e-39
 Identities = 88/91 (96%)
 Strand = Plus / Minus

                                                                       
Query: 16  tcctaggaagaggtagtaggttgcatagttttcgggcagggattttgcccacaaggaggt 75
           |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |
Sbjct: 91  tcctaggaagaggtagtaggttgcatagttttagggcagagattttgcccacaaggagtt 32

                                          
Query: 76  aactatacgacctgctgcctttcttagggcc 106
           |||||||||||||||||||||||||||||||
Sbjct: 31  aactatacgacctgctgcctttcttagggcc 1




>25873_gga-let-7d:mirbase
          Length = 103

 Score =  153 bits (77), Expect = 3e-38
 Identities = 95/101 (94%)
 Strand = Plus / Plus

                                                                       
Query: 11  tgggttcctaggaagaggtagtaggttgcatagttttcgggcagggattttgcccacaag 70
           |||| ||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||
Sbjct: 3   tgggctcctaggaagaggtagtgggttgcatagttttagggcagggattttgctcacaag 62

                                                    
Query: 71  gaggtaactatacgacctgctgcctttcttagggccttatt 111
           ||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 63  gaggtaactatacaacctgctgcctttcttagggctttatt 103




>26382_tgu-let-7d:mirbase
          Length = 92

 Score =  147 bits (74), Expect = 2e-36
 Identities = 86/90 (95%)
 Strand = Plus / Plus

                                                                       
Query: 16  tcctaggaagaggtagtaggttgcatagttttcgggcagggattttgcccacaaggaggt 75
           |||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||
Sbjct: 3   tcctaggaagaggtagtaggttgcatagttttagggcagggattttgctcagaaggaggt 62

                                         
Query: 76  aactatacgacctgctgcctttcttagggc 105
           |||||||| |||||||||||||||||||||
Sbjct: 63  aactatacaacctgctgcctttcttagggc 92




>31411_oan-let-7d:mirbase
          Length = 116

 Score =  133 bits (67), Expect = 3e-32
 Identities = 94/103 (91%)
 Strand = Plus / Plus

                                                                       
Query: 11  tgggttcctaggaagaggtagtaggttgcatagttttcgggcagggattttgcccacaag 70
           |||| |||||||||||||||||||||||||||||||| |||||| |||||||| || |||
Sbjct: 11  tgggctcctaggaagaggtagtaggttgcatagttttagggcagtgattttgctcataag 70

                                                      
Query: 71  gaggtaactatacgacctgctgcctttcttagggccttattat 113
           | | ||||||||| ||||||||||||||||||||| |||||||
Sbjct: 71  gtgttaactatacaacctgctgcctttcttagggctttattat 113




>26375_tgu-let-7a-1:mirbase
          Length = 92

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 25 gaggtagtaggttgcatagttttcgggc 52
          |||||||||||||| |||||||| ||||
Sbjct: 12 gaggtagtaggttgtatagttttagggc 39