miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39144_sme-mir-753b:mirbase
Length = 91
Score = 127 bits (64), Expect = 1e-30
Identities = 82/88 (93%)
Strand = Plus / Plus
Query: 2 ttttaataaagtatattttagggcttgaattgtgatctcgtatgtttatgagatcattgt 61
|||| |||||| |||||||| |||||||||||||||||| ||| ||||||||||||||||
Sbjct: 1 tttttataaagcatattttaaggcttgaattgtgatctcatatatttatgagatcattgt 60
Query: 62 tcaagctcttaaataatacttttaatca 89
||||||||||||||||||||||| ||||
Sbjct: 61 tcaagctcttaaataatacttttcatca 88
>39143_sme-mir-753b:mirbase
Length = 91
Score = 127 bits (64), Expect = 1e-30
Identities = 82/88 (93%)
Strand = Plus / Plus
Query: 2 ttttaataaagtatattttagggcttgaattgtgatctcgtatgtttatgagatcattgt 61
|||| |||||| |||||||| |||||||||||||||||| ||| ||||||||||||||||
Sbjct: 1 tttttataaagcatattttaaggcttgaattgtgatctcatatatttatgagatcattgt 60
Query: 62 tcaagctcttaaataatacttttaatca 89
||||||||||||||||||||||| ||||
Sbjct: 61 tcaagctcttaaataatacttttcatca 88
>39142_sme-mir-753:mirbase
Length = 77
Score = 113 bits (57), Expect = 2e-26
Identities = 72/77 (93%)
Strand = Plus / Plus
Query: 8 taaagtatattttagggcttgaattgtgatctcgtatgtttatgagatcattgttcaagc 67
||||||||||||||| ||||| ||||||||||| ||| |||||||||||||| |||||||
Sbjct: 1 taaagtatattttagagcttggattgtgatctcatatatttatgagatcattattcaagc 60
Query: 68 tcttaaataatactttt 84
|||||||||||||||||
Sbjct: 61 tcttaaataatactttt 77
>39145_sme-mir-753c:mirbase
Length = 90
Score = 111 bits (56), Expect = 8e-26
Identities = 80/88 (90%)
Strand = Plus / Plus
Query: 2 ttttaataaagtatattttagggcttgaattgtgatctcgtatgtttatgagatcattgt 61
|||||||||||||||||| | ||||| ||||||||||| ||| |||||||||||||| |
Sbjct: 1 ttttaataaagtatatttaaaagcttggattgtgatctcatatatttatgagatcattat 60
Query: 62 tcaagctcttaaataatacttttaatca 89
||||||||||||||||||||||| ||||
Sbjct: 61 tcaagctcttaaataatacttttcatca 88
>39147_sme-mir-753d:mirbase
Length = 58
Score = 75.8 bits (38), Expect = 5e-15
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 21 agggcttgaattgtgatctcgtatgtttatgagatcattgttcaagctct 70
|||||||| ||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 3 agggcttggattgtgatctcgtatatttatgagatcattattcaagctct 52
>39146_sme-mir-753d:mirbase
Length = 58
Score = 75.8 bits (38), Expect = 5e-15
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 21 agggcttgaattgtgatctcgtatgtttatgagatcattgttcaagctct 70
|||||||| ||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 3 agggcttggattgtgatctcgtatatttatgagatcattattcaagctct 52
>39148_sme-mir-753e:mirbase
Length = 57
Score = 52.0 bits (26), Expect = 7e-08
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 23 ggcttgaattgtgatctcgtatgtttatgagatcattgttcaagctcttaaata 76
|||||||||||||||||| || |||||||||||| ||||||||||| ||||
Sbjct: 4 ggcttgaattgtgatctcataaacctatgagatcattattcaagctcttcaata 57
