miRNEST 2.0, an integrative microRNA resource :: BLAST
>41348_ptc-MIR168b:mirbase
Length = 136
Score = 270 bits (136), Expect = 3e-73
Identities = 136/136 (100%)
Strand = Plus / Plus
Query: 15 ggtctctaattcgcttggtgcaggtcgggaactgattcggcgatttgattgccagatggc 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcgggaactgattcggcgatttgattgccagatggc 60
Query: 75 taaacacgattggctgtgaggcaaattataaaaagaaagagaattggatcccgccttgca 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taaacacgattggctgtgaggcaaattataaaaagaaagagaattggatcccgccttgca 120
Query: 135 tcaactgaatcggaga 150
||||||||||||||||
Sbjct: 121 tcaactgaatcggaga 136
>41347_ptc-MIR168a:mirbase
Length = 160
Score = 113 bits (57), Expect = 4e-26
Identities = 60/61 (98%)
Strand = Plus / Plus
Query: 15 ggtctctaattcgcttggtgcaggtcgggaactgattcggcgatttgattgccagatggc 74
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtctctgattcgcttggtgcaggtcgggaactgattcggcgatttgattgccagatggc 60
Query: 75 t 75
|
Sbjct: 61 t 61
Score = 69.9 bits (35), Expect = 6e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 115 gaattggatcccgccttgcatcaactgaatcggag 149
|||||||||||||||||||||||||||||||||||
Sbjct: 125 gaattggatcccgccttgcatcaactgaatcggag 159
>41215_crt-MIR168:mirbase
Length = 201
Score = 93.7 bits (47), Expect = 4e-20
Identities = 47/47 (100%)
Strand = Plus / Plus
Query: 5 agttaccggcggtctctaattcgcttggtgcaggtcgggaactgatt 51
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agttaccggcggtctctaattcgcttggtgcaggtcgggaactgatt 47
Score = 81.8 bits (41), Expect = 1e-16
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 115 gaattggatcccgccttgcatcaactgaatcggagaccgcggtga 159
||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 134 gaattggatcccgccttgcatcaactgaatcggagaccgaggtga 178
>41101_tcc-MIR168:mirbase
Length = 167
Score = 93.7 bits (47), Expect = 4e-20
Identities = 47/47 (100%)
Strand = Plus / Plus
Query: 5 agttaccggcggtctctaattcgcttggtgcaggtcgggaactgatt 51
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agttaccggcggtctctaattcgcttggtgcaggtcgggaactgatt 47
Score = 89.7 bits (45), Expect = 6e-19
Identities = 45/45 (100%)
Strand = Plus / Plus
Query: 115 gaattggatcccgccttgcatcaactgaatcggagaccgcggtga 159
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 gaattggatcccgccttgcatcaactgaatcggagaccgcggtga 162
>41210_ccl-MIR168:mirbase
Length = 176
Score = 91.7 bits (46), Expect = 2e-19
Identities = 46/46 (100%)
Strand = Plus / Plus
Query: 6 gttaccggcggtctctaattcgcttggtgcaggtcgggaactgatt 51
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttaccggcggtctctaattcgcttggtgcaggtcgggaactgatt 46
Score = 79.8 bits (40), Expect = 6e-16
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 115 gaattggatcccgccttgcatcaactgaatcggagaccgcggtg 158
||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 133 gaattggatcccgccttgcatcaactgaatcggagaccgaggtg 176
>40448_gma-MIR168:mirbase
Length = 125
Score = 83.8 bits (42), Expect = 4e-17
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 115 gaattggatcccgccttgcatcaactgaatcggagaccgcggtgaa 160
||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 79 gaattggatcccgccttgcatcaactgaatcggaggccgcggtgaa 124
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 13 gcggtctctaattcgcttggtgcaggtcgggaac 46
||||||||||||||||||||||||||||||||||
Sbjct: 7 gcggtctctaattcgcttggtgcaggtcgggaac 40
>39833_aly-MIR168b:mirbase
Length = 176
Score = 77.8 bits (39), Expect = 2e-15
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 5 agttaccggcggtctctaattcgcttggtgcaggtcgggaactgatt 51
|||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 23 agttaccggcggtctcggattcgcttggtgcaggtcgggaactgatt 69
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 121 gatcccgccttgcatcaactgaatcggagaccgcggtgaa 160
||||||| |||| |||||||||||||||| ||| ||||||
Sbjct: 110 gatcccgtcttgtatcaactgaatcggagtccgaggtgaa 149
>40044_ath-MIR168b:mirbase
Length = 124
Score = 73.8 bits (37), Expect = 4e-14
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 7 ttaccggcggtctctaattcgcttggtgcaggtcgggaactgatt 51
|||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1 ttaccggcggtctcggattcgcttggtgcaggtcgggaactgatt 45
Score = 42.1 bits (21), Expect = 1e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 123 tcccgccttgcatcaactgaatcggagaccgcggtga 159
||||| |||| |||||||||||||||| ||| |||||
Sbjct: 88 tcccgtcttgtatcaactgaatcggagtccgaggtga 124
>40355_rco-MIR168:mirbase
Length = 131
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 109 gaaagagaattggatcccgccttgcatcaactgaatcg 146
||||| ||||||||||||||||||||||||||||||||
Sbjct: 91 gaaagtgaattggatcccgccttgcatcaactgaatcg 128
Score = 63.9 bits (32), Expect = 4e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 20 ctaattcgcttggtgcaggtcgggaactgatt 51
||||||||||||||||||||||||||||||||
Sbjct: 1 ctaattcgcttggtgcaggtcgggaactgatt 32
>41596_vvi-MIR168:mirbase
Length = 132
Score = 63.9 bits (32), Expect = 4e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 15 ggtctctaattcgcttggtgcaggtcgggaac 46
||||||||||||||||||||||||||||||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcgggaac 32
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 121 gatcccgccttgcatcaactgaatcggagac 151
|||||||||||||||||||||||||||||||
Sbjct: 99 gatcccgccttgcatcaactgaatcggagac 129
>40043_ath-MIR168a:mirbase
Length = 138
Score = 63.9 bits (32), Expect = 4e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 117 attggatcccgccttgcatcaactgaatcgga 148
||||||||||||||||||||||||||||||||
Sbjct: 96 attggatcccgccttgcatcaactgaatcgga 127
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 23 attcgcttggtgcaggtcgggaactgattcggc 55
|||||||||||||||||||||||| |||||||
Sbjct: 16 attcgcttggtgcaggtcgggaaccaattcggc 48
>39832_aly-MIR168a:mirbase
Length = 155
Score = 63.9 bits (32), Expect = 4e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 117 attggatcccgccttgcatcaactgaatcgga 148
||||||||||||||||||||||||||||||||
Sbjct: 102 attggatcccgccttgcatcaactgaatcgga 133
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 23 attcgcttggtgcaggtcgggaactgattcggc 55
|||||||||||||||||||||||| |||||||
Sbjct: 22 attcgcttggtgcaggtcgggaaccaattcggc 54
>40271_bna-MIR168:mirbase
Length = 133
Score = 58.0 bits (29), Expect = 2e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 11 cggcggtctctaattcgcttggtgcaggtcgggaactgatt 51
|||||| |||| | |||||||||||||||||||||||||||
Sbjct: 4 cggcggcctctgactcgcttggtgcaggtcgggaactgatt 44
>42742_zma-MIR168b:mirbase
Length = 104
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 120 ggatcccgccttgcatcaactgaatcggag 149
||||||||||||||||||| ||||||||||
Sbjct: 63 ggatcccgccttgcatcaagtgaatcggag 92
>42741_zma-MIR168a:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 120 ggatcccgccttgcatcaactgaatcggag 149
||||||||||||||| ||| ||||||||||
Sbjct: 63 ggatcccgccttgcaccaagtgaatcggag 92
>42470_ssp-MIR168a:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 120 ggatcccgccttgcatcaactgaatcggag 149
||||||||||||||| ||| ||||||||||
Sbjct: 60 ggatcccgccttgcaccaagtgaatcggag 89
>42460_sof-MIR168b:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 120 ggatcccgccttgcatcaactgaatcggag 149
||||||||||||||| ||| ||||||||||
Sbjct: 62 ggatcccgccttgcaccaagtgaatcggag 91
>42459_sof-MIR168a:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 120 ggatcccgccttgcatcaactgaatcggag 149
||||||||||||||| ||| ||||||||||
Sbjct: 63 ggatcccgccttgcaccaagtgaatcggag 92
>41962_osa-MIR168a:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 120 ggatcccgccttgcatcaactgaatcggag 149
||||||||||||||| ||| ||||||||||
Sbjct: 55 ggatcccgccttgcaccaagtgaatcggag 84
>41961_osa-MIR168a:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 120 ggatcccgccttgcatcaactgaatcggag 149
||||||||||||||| ||| ||||||||||
Sbjct: 55 ggatcccgccttgcaccaagtgaatcggag 84
>41888_hvu-MIR168:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 120 ggatcccgccttgcatcaactgaatcggag 149
||||||||||||||| ||| ||||||||||
Sbjct: 66 ggatcccgccttgcaccaagtgaatcggag 95
>41887_hvu-MIR168:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 120 ggatcccgccttgcatcaactgaatcggag 149
||||||||||||||| ||| ||||||||||
Sbjct: 66 ggatcccgccttgcaccaagtgaatcggag 95
>41753_bdi-MIR168:mirbase
Length = 136
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 120 ggatcccgccttgcatcaactgaatcggag 149
||||||||||||||| ||| ||||||||||
Sbjct: 75 ggatcccgccttgcaccaagtgaatcggag 104
