miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41463_ptc-MIR408:mirbase
          Length = 105

 Score =  200 bits (101), Expect = 3e-52
 Identities = 104/105 (99%)
 Strand = Plus / Plus

                                                                       
Query: 37  agagacagatgaagacggggaacaggcagagcatggatggagctactaacagaagtacat 96
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1   agagacagatgaagacggggaacaggcagagcatggatggagctactaacagaagtactt 60

                                                        
Query: 97  gttttggctctacccatgcactgcctcttccctggcttgtggctc 141
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gttttggctctacccatgcactgcctcttccctggcttgtggctc 105




>40391_rco-MIR408:mirbase
          Length = 92

 Score = 99.6 bits (50), Expect = 7e-22
 Identities = 81/89 (91%), Gaps = 3/89 (3%)
 Strand = Plus / Plus

                                                                       
Query: 48  aagacggggaacaggcagagcatggatggagctactaacagaagtaca--tgttttggct 105
           ||||| |||||||||||| |||||||||| |||||||||||||  |||  ||||||||||
Sbjct: 2   aagactgggaacaggcagtgcatggatggggctactaacagaa-aacatctgttttggct 60

                                        
Query: 106 ctacccatgcactgcctcttccctggctt 134
           |||||| ||||||||||||||||||||||
Sbjct: 61  ctacccctgcactgcctcttccctggctt 89




>41252_csi-MIR408:mirbase
          Length = 153

 Score = 79.8 bits (40), Expect = 7e-16
 Identities = 77/87 (88%), Gaps = 3/87 (3%)
 Strand = Plus / Plus

                                                                       
Query: 48  aagacggggaacaggcagagcatggatggagctactaacagaagtac-atgttttggctc 106
           |||||||||||||||||||||||||||||| | | ||||||  || |  |||||||||||
Sbjct: 57  aagacggggaacaggcagagcatggatggaaccattaacag--gttctctgttttggctc 114

                                      
Query: 107 tacccatgcactgcctcttccctggct 133
             |||||||||||||||||||||||||
Sbjct: 115 ctcccatgcactgcctcttccctggct 141




>41683_vvi-MIR408:mirbase
          Length = 107

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                 
Query: 96  tgttttggctctacccatgcactgcctcttccctggct 133
           |||||| |||||||||||||||||||||||||||||||
Sbjct: 61  tgtttttgctctacccatgcactgcctcttccctggct 98




>40108_ath-MIR408:mirbase
          Length = 218

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                 
Query: 96  tgttttggctctacccatgcactgcctcttccctggct 133
           ||||||| ||||||||||||||||||||||||||||||
Sbjct: 104 tgttttgtctctacccatgcactgcctcttccctggct 141




>39897_aly-MIR408:mirbase
          Length = 211

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                 
Query: 96  tgttttggctctacccatgcactgcctcttccctggct 133
           ||||||| ||||||||||||||||||||||||||||||
Sbjct: 101 tgttttgtctctacccatgcactgcctcttccctggct 138




>41193_aqc-MIR408:mirbase
          Length = 87

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 110 ccatgcactgcctcttccctggct 133
           ||||||||||||||||||||||||
Sbjct: 24  ccatgcactgcctcttccctggct 1




>39490_ppt-MIR408b:mirbase
          Length = 144

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 111 catgcactgcctcttccctggctt 134
           ||||||||||||||||||||||||
Sbjct: 92  catgcactgcctcttccctggctt 115




>40405_ahy-MIR408:mirbase
          Length = 122

 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 111 catgcactgcctcttccctggct 133
           |||||||||||||||||||||||
Sbjct: 80  catgcactgcctcttccctggct 102



 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 54 gggaacaggcagagcatggatgga 77
          |||||||||||||||||| |||||
Sbjct: 23 gggaacaggcagagcatgaatgga 46




>40404_ahy-MIR408:mirbase
          Length = 122

 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 111 catgcactgcctcttccctggct 133
           |||||||||||||||||||||||
Sbjct: 80  catgcactgcctcttccctggct 102



 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 54 gggaacaggcagagcatggatgga 77
          |||||||||||||||||| |||||
Sbjct: 23 gggaacaggcagagcatgaatgga 46




>42474_ssp-MIR408d:mirbase
          Length = 180

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 108 acccatgcactgcctcttccctggct 133
           |||| |||||||||||||||||||||
Sbjct: 154 acccctgcactgcctcttccctggct 179




>42465_sof-MIR408d:mirbase
          Length = 215

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 108 acccatgcactgcctcttccctggct 133
           |||| |||||||||||||||||||||
Sbjct: 172 acccctgcactgcctcttccctggct 197




>39742_smo-MIR408:mirbase
          Length = 109

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 112 atgcactgcctcttccctggct 133
           ||||||||||||||||||||||
Sbjct: 76  atgcactgcctcttccctggct 97




>39428_pta-MIR408:mirbase
          Length = 86

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 112 atgcactgcctcttccctggct 133
           ||||||||||||||||||||||
Sbjct: 64  atgcactgcctcttccctggct 85




>42830_zma-MIR408b:mirbase
          Length = 147

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 113 tgcactgcctcttccctggct 133
           |||||||||||||||||||||
Sbjct: 126 tgcactgcctcttccctggct 146




>42829_zma-MIR408:mirbase
          Length = 191

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 113 tgcactgcctcttccctggct 133
           |||||||||||||||||||||
Sbjct: 153 tgcactgcctcttccctggct 173




>42647_tae-MIR408:mirbase
          Length = 187

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 113 tgcactgcctcttccctggct 133
           |||||||||||||||||||||
Sbjct: 137 tgcactgcctcttccctggct 157




>42600_sbi-MIR408:mirbase
          Length = 205

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 113 tgcactgcctcttccctggct 133
           |||||||||||||||||||||
Sbjct: 185 tgcactgcctcttccctggct 205




>42473_ssp-MIR408a:mirbase
          Length = 248

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 113 tgcactgcctcttccctggct 133
           |||||||||||||||||||||
Sbjct: 227 tgcactgcctcttccctggct 247




>42464_sof-MIR408c:mirbase
          Length = 286

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 113 tgcactgcctcttccctggct 133
           |||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggct 268




>42463_sof-MIR408b:mirbase
          Length = 286

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 113 tgcactgcctcttccctggct 133
           |||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggct 268




>42462_sof-MIR408a:mirbase
          Length = 283

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 113 tgcactgcctcttccctggct 133
           |||||||||||||||||||||
Sbjct: 245 tgcactgcctcttccctggct 265




>42052_osa-MIR408:mirbase
          Length = 213

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 113 tgcactgcctcttccctggct 133
           |||||||||||||||||||||
Sbjct: 154 tgcactgcctcttccctggct 174