miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46908_ata-miR1120:pmrd
          Length = 85

 Score = 81.8 bits (41), Expect = 1e-16
 Identities = 56/61 (91%)
 Strand = Plus / Minus

                                                                      
Query: 34 tgactcaactttgtactaactttagtgcaaatttagtacacagttgagtcatttattttg 93
          ||||||||||||||||||||| |||| |||| |||||||| ||||||||||| |||||||
Sbjct: 68 tgactcaactttgtactaactatagtacaaaattagtacaaagttgagtcatctattttg 9

           
Query: 94 g 94
          |
Sbjct: 8  g 8



 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 65/77 (84%), Gaps = 2/77 (2%)
 Strand = Plus / Plus

                                                                      
Query: 17 ctccgtcccaaattaagtgactcaactttgtactaactttagtgc-aaatttagtacaca 75
          |||||| ||||| ||  ||||||||||||||||||| ||| || | | | |||||||| |
Sbjct: 1  ctccgttccaaaatagatgactcaactttgtactaa-ttttgtactatagttagtacaaa 59

                           
Query: 76 gttgagtcatttatttt 92
          |||||||||| ||||||
Sbjct: 60 gttgagtcatctatttt 76




>48648_hpr-miR1120:pmrd
          Length = 85

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 40/42 (95%)
 Strand = Plus / Minus

                                                    
Query: 11 tactccctccgtcccaaattaagtgactcaactttgtactaa 52
          |||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 80 tactccctccgtcccaaaataagtgactcaactttatactaa 39



 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                             
Query: 11 tactccctccgtcccaaattaagtgactcaacttt 45
          |||||||||||||||||| ||||||||||||||||
Sbjct: 6  tactccctccgtcccaaaataagtgactcaacttt 40



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 65  tttagtacacagttgagtcatttattttgggacagaggga 104
           ||||||| | |||||||||| |||||||||||| ||||||
Sbjct: 38  tttagtataaagttgagtcacttattttgggacggaggga 77



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 75  agttgagtcatttattttgggacagaggga 104
           |||||||||| |||||||||||| ||||||
Sbjct: 38  agttgagtcacttattttgggacggaggga 9




>54712_tae-miR1137:pmrd
          Length = 148

 Score = 60.0 bits (30), Expect = 4e-10
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                 
Query: 11  tactccctccgtcccaaattaagtgactcaactttgtactaactttagtgcaaa 64
           |||||||||||| ||| | ||  |||||||||||||||||||||||||| ||||
Sbjct: 113 tactccctccgttccagaatagatgactcaactttgtactaactttagtacaaa 60




>50485_osa-miRf11270-akr:pmrd
          Length = 82

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 7  gaagtactccctccgtcccaaa 28
          ||||||||||||||||||||||
Sbjct: 80 gaagtactccctccgtcccaaa 59




>49596_osa-miRf10381-akr:pmrd
          Length = 147

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 11 tactccctccgtcccaaattaagtg 35
          |||||||||||||||||| ||||||
Sbjct: 1  tactccctccgtcccaaaataagtg 25