miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>48648_hpr-miR1120:pmrd
          Length = 85

 Score = 56.0 bits (28), Expect = 6e-09
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                          
Query: 10 atactccctccgtcccaaaataagtgtctcaa 41
          |||||||||||||||||||||||||| |||||
Sbjct: 81 atactccctccgtcccaaaataagtgactcaa 50



 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                         
Query: 11 tactccctccgtcccaaaataagtgtctcaa 41
          ||||||||||||||||||||||||| |||||
Sbjct: 6  tactccctccgtcccaaaataagtgactcaa 36



 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 82  cacttattttgggacggagggagta 106
           |||||||||||||||||||||||||
Sbjct: 30  cacttattttgggacggagggagta 6



 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 82  cacttattttgggacggagggagta 106
           |||||||||||||||||||||||||
Sbjct: 56  cacttattttgggacggagggagta 80




>49596_osa-miRf10381-akr:pmrd
          Length = 147

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 82  cacttattttgggacggagggagta 106
           |||||||||||||||||||||||||
Sbjct: 25  cacttattttgggacggagggagta 1



 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 11 tactccctccgtcccaaaataagtg 35
          |||||||||||||||||||||||||
Sbjct: 1  tactccctccgtcccaaaataagtg 25




>50820_osa-miRf11605-akr:pmrd
          Length = 101

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 11 tactccctccgtcccaaaataagt 34
          ||||||||||||||||||||||||
Sbjct: 95 tactccctccgtcccaaaataagt 72



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 83  acttattttgggacggagggagta 106
           ||||||||||||||||||||||||
Sbjct: 72  acttattttgggacggagggagta 95




>50819_osa-miRf11604-akr:pmrd
          Length = 101

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 11 tactccctccgtcccaaaataagt 34
          ||||||||||||||||||||||||
Sbjct: 95 tactccctccgtcccaaaataagt 72



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 83  acttattttgggacggagggagta 106
           ||||||||||||||||||||||||
Sbjct: 72  acttattttgggacggagggagta 95




>50818_osa-miRf11603-akr:pmrd
          Length = 101

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 83  acttattttgggacggagggagta 106
           ||||||||||||||||||||||||
Sbjct: 30  acttattttgggacggagggagta 7



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 11 tactccctccgtcccaaaataagt 34
          ||||||||||||||||||||||||
Sbjct: 7  tactccctccgtcccaaaataagt 30




>49366_osa-miRf10151-akr:pmrd
          Length = 82

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 8  atatactccctccgtcccaaaata 31
          ||||||||||||||||||||||||
Sbjct: 82 atatactccctccgtcccaaaata 59



 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 86  tattttgggacggagggagta 106
           |||||||||||||||||||||
Sbjct: 59  tattttgggacggagggagta 79




>49784_osa-miRf10569-akr:pmrd
          Length = 132

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 85  ttattttgggacggagggagtaa 107
           |||||||||||||||||||||||
Sbjct: 32  ttattttgggacggagggagtaa 10



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 tactccctccgtcccaaaataa 32
          ||||||||||||||||||||||
Sbjct: 11 tactccctccgtcccaaaataa 32




>49783_osa-miRf10568-akr:pmrd
          Length = 132

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 85  ttattttgggacggagggagtaa 107
           |||||||||||||||||||||||
Sbjct: 32  ttattttgggacggagggagtaa 10



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 tactccctccgtcccaaaataa 32
          ||||||||||||||||||||||
Sbjct: 11 tactccctccgtcccaaaataa 32




>49537_osa-miRf10322-akr:pmrd
          Length = 105

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 9  tatactccctccgtcccaaaata 31
          |||||||||||||||||||||||
Sbjct: 8  tatactccctccgtcccaaaata 30



 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 86  tattttgggacggagggagta 106
           |||||||||||||||||||||
Sbjct: 30  tattttgggacggagggagta 10




>49536_osa-miRf10321-akr:pmrd
          Length = 105

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 9  tatactccctccgtcccaaaata 31
          |||||||||||||||||||||||
Sbjct: 8  tatactccctccgtcccaaaata 30



 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 86  tattttgggacggagggagta 106
           |||||||||||||||||||||
Sbjct: 30  tattttgggacggagggagta 10




>49517_osa-miRf10302-akr:pmrd
          Length = 103

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 9  tatactccctccgtcccaaaata 31
          |||||||||||||||||||||||
Sbjct: 99 tatactccctccgtcccaaaata 77



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 10 atactccctccgtcccaaaata 31
          ||||||||||||||||||||||
Sbjct: 6  atactccctccgtcccaaaata 27



 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 86  tattttgggacggagggagta 106
           |||||||||||||||||||||
Sbjct: 27  tattttgggacggagggagta 7



 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 86  tattttgggacggagggagta 106
           |||||||||||||||||||||
Sbjct: 77  tattttgggacggagggagta 97




>49433_osa-miRf10218-akr:pmrd
          Length = 93

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 7  aatatactccctccgtcccaaaa 29
          |||||||||||||||||||||||
Sbjct: 7  aatatactccctccgtcccaaaa 29



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 10 atactccctccgtcccaaaa 29
          ||||||||||||||||||||
Sbjct: 84 atactccctccgtcccaaaa 65




>49156_osa-miR1862e:pmrd
          Length = 93

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 10 atactccctccgtcccaaaataa 32
          |||||||||||||||||||||||
Sbjct: 92 atactccctccgtcccaaaataa 70



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 85  ttattttgggacggagggagta 106
           ||||||||||||||||||||||
Sbjct: 70  ttattttgggacggagggagta 91




>49155_osa-miR1862d:pmrd
          Length = 150

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 10  atactccctccgtcccaaaataa 32
           |||||||||||||||||||||||
Sbjct: 123 atactccctccgtcccaaaataa 101



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 85  ttattttgggacggagggagta 106
           ||||||||||||||||||||||
Sbjct: 101 ttattttgggacggagggagta 122




>49154_osa-miR1862c:pmrd
          Length = 89

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 83  acttattttgggacggagggagt 105
           |||||||||||||||||||||||
Sbjct: 23  acttattttgggacggagggagt 1



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 actccctccgtcccaaaataagt 34
          |||||||||||||||||||||||
Sbjct: 1  actccctccgtcccaaaataagt 23




>49152_osa-miR1862a:pmrd
          Length = 88

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 10 atactccctccgtcccaaaataa 32
          |||||||||||||||||||||||
Sbjct: 88 atactccctccgtcccaaaataa 66



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 85  ttattttgggacggagggagta 106
           ||||||||||||||||||||||
Sbjct: 66  ttattttgggacggagggagta 87