miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>54695_tae-miR1120:pmrd
          Length = 119

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 34/35 (97%), Gaps = 1/35 (2%)
 Strand = Plus / Plus

                                             
Query: 13 tactccctccgtcccataatataag-acatttttg 46
          ||||||||||||||||||||||||| |||||||||
Sbjct: 18 tactccctccgtcccataatataagaacatttttg 52



 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 10  aaatactccctccgtcccataatataaga 38
           |||||||||||||||| ||||||||||||
Sbjct: 102 aaatactccctccgtctcataatataaga 74




>51250_osa-miRf12035-akr:pmrd
          Length = 119

 Score = 52.0 bits (26), Expect = 8e-08
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 12  atactccctccgtcccataatataag 37
           ||||||||||||||||||||||||||
Sbjct: 114 atactccctccgtcccataatataag 89



 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 13 tactccctccgtcccataatataag 37
          |||||||||||||||||||||||||
Sbjct: 10 tactccctccgtcccataatataag 34




>50738_osa-miRf11523-akr:pmrd
          Length = 108

 Score = 52.0 bits (26), Expect = 8e-08
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                    
Query: 12 atactccctccgtcccataatataag 37
          ||||||||||||||||||||||||||
Sbjct: 98 atactccctccgtcccataatataag 73




>51255_osa-miRf12040-akr:pmrd
          Length = 102

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 13 tactccctccgtcccataatataag 37
          |||||||||||||||||||||||||
Sbjct: 9  tactccctccgtcccataatataag 33




>51254_osa-miRf12039-akr:pmrd
          Length = 102

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 13 tactccctccgtcccataatataag 37
          |||||||||||||||||||||||||
Sbjct: 9  tactccctccgtcccataatataag 33




>50587_osa-miRf11372-akr:pmrd
          Length = 126

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 13 tactccctccgtcccataatataag 37
          |||||||||||||||||||||||||
Sbjct: 7  tactccctccgtcccataatataag 31



 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 13  tactccctccgtcccataatataag 37
           |||||||||||||||||||||||||
Sbjct: 121 tactccctccgtcccataatataag 97




>49070_osa-miR818d:pmrd
          Length = 139

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 13  tactccctccgtcccataatataag 37
           |||||||||||||||||||||||||
Sbjct: 127 tactccctccgtcccataatataag 103




>54705_tae-miR1130:pmrd
          Length = 122

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 19  ctccgtcccataatataagacatttttgcaa 49
           |||||||||||||| |||||| |||||||||
Sbjct: 105 ctccgtcccataatgtaagacgtttttgcaa 75




>49068_osa-miR818b:pmrd
          Length = 113

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 18 cctccgtcccataatataagacatttt 44
          ||||||||||||||||||||| |||||
Sbjct: 1  cctccgtcccataatataagagatttt 27



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 18  cctccgtcccataatataag 37
           ||||||||||||||||||||
Sbjct: 113 cctccgtcccataatataag 94




>49120_osa-miR1436:pmrd
          Length = 161

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 13 tactccctccgtcccataatat 34
          ||||||||||||||||||||||
Sbjct: 12 tactccctccgtcccataatat 33



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 13  tactccctccgtcccataat 32
           ||||||||||||||||||||
Sbjct: 142 tactccctccgtcccataat 123