miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>54697_tae-miR1122:pmrd
          Length = 295

 Score = 69.9 bits (35), Expect = 6e-13
 Identities = 83/99 (83%)
 Strand = Plus / Minus

                                                                       
Query: 16  ccctccgtccctaaatataagtcattttaaagatttcaatatggactacacaggaagcaa 75
           ||||| || |||||||||| | | | ||| ||||| || ||||||||||| | |||| ||
Sbjct: 288 ccctctgttcctaaatatatgccttcttagagattccactatggactacatacgaagtaa 229

                                                  
Query: 76  aacgagtgaatctacactctaaaacacgtctatgtacat 114
           || ||||||||||||||||||||| | |||||| |||||
Sbjct: 228 aatgagtgaatctacactctaaaatatgtctatatacat 190




>54701_tae-miR1126:pmrd
          Length = 164

 Score = 63.9 bits (32), Expect = 4e-11
 Identities = 74/88 (84%)
 Strand = Plus / Plus

                                                                      
Query: 12 tactccctccgtccctaaatataagtcattttaaagatttcaatatggactacacaggaa 71
          ||||| |||||| |||||||||||||| || || | ||| || ||||||||||| | | |
Sbjct: 2  tactctctccgttcctaaatataagtctttatagaaattccactatggactacatacgga 61

                                      
Query: 72 gcaaaacgagtgaatctacactctaaaa 99
          ||||||  | ||||||||||||||||||
Sbjct: 62 gcaaaataaatgaatctacactctaaaa 89



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 11  atactccctccgtccctaaatataagtcattttaaagattt 51
           |||||||||||||  ||||||||||||| || || ||||||
Sbjct: 164 atactccctccgtttctaaatataagtctttgtagagattt 124




>50827_osa-miRf11612-akr:pmrd
          Length = 126

 Score = 56.0 bits (28), Expect = 1e-08
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                           
Query: 12  tactccctccgtccctaaatataagtcatttt 43
           |||||||||||||||||||||||||| |||||
Sbjct: 126 tactccctccgtccctaaatataagtgatttt 95



 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tactccctccgtccctaaatata 34
          |||||||||||||||||||||||
Sbjct: 1  tactccctccgtccctaaatata 23




>49712_osa-miRf10497-akr:pmrd
          Length = 172

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 11 atactccctccgtccctaaatataag 36
          ||||||||||||||||||||||||||
Sbjct: 1  atactccctccgtccctaaatataag 26




>51023_osa-miRf11808-akr:pmrd
          Length = 117

 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 12  tactccctccgtccctaaatataag 36
           |||||||||||||||||||||||||
Sbjct: 113 tactccctccgtccctaaatataag 89



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 12 tactccctccgtccctaaatataa 35
          ||||||||||||||||||||||||
Sbjct: 5  tactccctccgtccctaaatataa 28




>49950_osa-miRf10735-akr:pmrd
          Length = 131

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 12 tactccctccgtccctaaatataa 35
          ||||||||||||||||||||||||
Sbjct: 7  tactccctccgtccctaaatataa 30



 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 12  tactccctccgtccctaaatataa 35
           |||||||||| |||||||||||||
Sbjct: 128 tactccctccatccctaaatataa 105




>50427_osa-miRf11212-akr:pmrd
          Length = 152

 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 10 tatactccctccgtccctaaata 32
          |||||||||||||||||||||||
Sbjct: 10 tatactccctccgtccctaaata 32



 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 10  tatactccctccgtccctaaata 32
           |||||||||||||||||||||||
Sbjct: 143 tatactccctccgtccctaaata 121




>49537_osa-miRf10322-akr:pmrd
          Length = 105

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 10 tatactccctccgtccctaaatataa 35
          ||||||||||||||||| ||||||||
Sbjct: 8  tatactccctccgtcccaaaatataa 33



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 12 tactccctccgtccctaaatataag 36
          ||||||||||||||| |||||||||
Sbjct: 96 tactccctccgtcccgaaatataag 72




>49536_osa-miRf10321-akr:pmrd
          Length = 105

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 10 tatactccctccgtccctaaatataa 35
          ||||||||||||||||| ||||||||
Sbjct: 8  tatactccctccgtcccaaaatataa 33



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 12 tactccctccgtccctaaatataag 36
          ||||||||||||||| |||||||||
Sbjct: 96 tactccctccgtcccgaaatataag 72




>50531_osa-miRf11316-akr:pmrd
          Length = 82

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 12 tactccctccgtccctaaatataag 36
          |||||||||||| ||||||||||||
Sbjct: 6  tactccctccgttcctaaatataag 30




>49818_osa-miRf10603-akr:pmrd
          Length = 97

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 12 tactccctccgtccctaaatataag 36
          ||||||||||||||| |||||||||
Sbjct: 92 tactccctccgtcccaaaatataag 68




>49517_osa-miRf10302-akr:pmrd
          Length = 103

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 10 tatactccctccgtccctaaatata 34
          ||||||||||||||||| |||||||
Sbjct: 99 tatactccctccgtcccaaaatata 75



 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 11 atactccctccgtccctaaatata 34
          |||||||||||||||| |||||||
Sbjct: 6  atactccctccgtcccaaaatata 29




>49366_osa-miRf10151-akr:pmrd
          Length = 82

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 10 tatactccctccgtccctaaatata 34
          ||||||||||||||||| |||||||
Sbjct: 81 tatactccctccgtcccaaaatata 57




>51250_osa-miRf12035-akr:pmrd
          Length = 119

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                          
Query: 12 tactccctccgtccctaaatataagtcatttt 43
          |||||||||||||||  ||||||||| |||||
Sbjct: 10 tactccctccgtcccataatataagtaatttt 41




>50920_osa-miRf11705-akr:pmrd
          Length = 134

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 12  tactccctccgtccctaaatataa 35
           ||||||||||||||| ||||||||
Sbjct: 122 tactccctccgtcccaaaatataa 99




>49958_osa-miRf10743-akr:pmrd
          Length = 122

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 11 atactccctccgtccctaaatata 34
          |||||||||||||||| |||||||
Sbjct: 11 atactccctccgtcccaaaatata 34




>49957_osa-miRf10742-akr:pmrd
          Length = 128

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 11  atactccctccgtccctaaatata 34
           |||||||||||||||| |||||||
Sbjct: 116 atactccctccgtcccaaaatata 93