miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>48648_hpr-miR1120:pmrd
          Length = 85

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 40/42 (95%)
 Strand = Plus / Minus

                                                    
Query: 16 atactccctctgtcccaaaataagtgtctcaactttatacta 57
          |||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 81 atactccctccgtcccaaaataagtgactcaactttatacta 40



 Score = 56.0 bits (28), Expect = 6e-09
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                              
Query: 17 tactccctctgtcccaaaataagtgtctcaacttta 52
          ||||||||| ||||||||||||||| ||||||||||
Sbjct: 6  tactccctccgtcccaaaataagtgactcaacttta 41




>54712_tae-miR1137:pmrd
          Length = 148

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                 
Query: 17  tactccctctgtcccaaaataagtgtctcaactttatactagctttagtacaaa 70
           ||||||||| || ||| ||||  || ||||||||| ||||| ||||||||||||
Sbjct: 113 tactccctccgttccagaatagatgactcaactttgtactaactttagtacaaa 60




>50834_osa-miRf11619-akr:pmrd
          Length = 141

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 17 tactccctctgtcccaaaataa 38
          ||||||||||||||||||||||
Sbjct: 10 tactccctctgtcccaaaataa 31



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 90  agttattttgggacagaggaagta 113
           ||||||||||||||||||| ||||
Sbjct: 33  agttattttgggacagagggagta 10




>50833_osa-miRf11618-akr:pmrd
          Length = 143

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 17  tactccctctgtcccaaaataa 38
           ||||||||||||||||||||||
Sbjct: 133 tactccctctgtcccaaaataa 112



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 90  agttattttgggacagaggaagta 113
           ||||||||||||||||||| ||||
Sbjct: 110 agttattttgggacagagggagta 133




>50305_osa-miRf11090-akr:pmrd
          Length = 116

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 16  atactccctctgtcccaaaata 37
           ||||||||||||||||||||||
Sbjct: 109 atactccctctgtcccaaaata 88




>49784_osa-miRf10569-akr:pmrd
          Length = 132

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 17  tactccctctgtcccaaaataa 38
           ||||||||||||||||||||||
Sbjct: 123 tactccctctgtcccaaaataa 102




>49783_osa-miRf10568-akr:pmrd
          Length = 132

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 17  tactccctctgtcccaaaataa 38
           ||||||||||||||||||||||
Sbjct: 123 tactccctctgtcccaaaataa 102




>49155_osa-miR1862d:pmrd
          Length = 150

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 17 tactccctctgtcccaaaataa 38
          ||||||||||||||||||||||
Sbjct: 29 tactccctctgtcccaaaataa 50



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 15  gatactccctctgtcccaaaataa 38
           ||||||||||| ||||||||||||
Sbjct: 124 gatactccctccgtcccaaaataa 101




>49596_osa-miRf10381-akr:pmrd
          Length = 147

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 17 tactccctctgtcccaaaataagtg 41
          ||||||||| |||||||||||||||
Sbjct: 1  tactccctccgtcccaaaataagtg 25




>49057_osa-miR812j:pmrd
          Length = 297

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 92  ttattttgggacagaggaagtacta 116
           ||||||||||||| |||||||||||
Sbjct: 47  ttattttgggacaaaggaagtacta 23