miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>54756_tmo-miR1120:pmrd
          Length = 85

 Score = 93.7 bits (47), Expect = 5e-20
 Identities = 68/75 (90%)
 Strand = Plus / Plus

                                                                       
Query: 76  gtaaattaatataagatcctttagatcactaaaatagtgatctaaatgctcttatattag 135
           ||||| |||||||||| | |||||||||||||| |||||||||||| | |||||||||||
Sbjct: 11  gtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtcttatattag 70

                          
Query: 136 tttatagagggagta 150
           |||| ||||||||||
Sbjct: 71  tttacagagggagta 85



 Score = 75.8 bits (38), Expect = 1e-14
 Identities = 71/82 (86%)
 Strand = Plus / Minus

                                                                       
Query: 66  tactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaatgct 125
           |||||| || ||||| |||||||||| | ||||||||||||   |||||||||||| | |
Sbjct: 85  tactccctctgtaaactaatataagaccttttagatcactactttagtgatctaaaaggt 26

                                 
Query: 126 cttatattagtttatagaggga 147
           |||||||||||||| |||||||
Sbjct: 25  cttatattagtttacagaggga 4




>54761_tur-miR1120:pmrd
          Length = 84

 Score = 77.8 bits (39), Expect = 3e-15
 Identities = 67/75 (89%), Gaps = 1/75 (1%)
 Strand = Plus / Plus

                                                                       
Query: 76  gtaaattaatataagatcctttagatcactaaaatagtgatctaaatgctcttatattag 135
           ||||| |||||||||| | |||||||||||||  |||||||||||| | |||||||||||
Sbjct: 11  gtaaactaatataagaccttttagatcactaag-tagtgatctaaaaggtcttatattag 69

                          
Query: 136 tttatagagggagta 150
           |||| ||||||||||
Sbjct: 70  tttacagagggagta 84



 Score = 67.9 bits (34), Expect = 3e-12
 Identities = 71/82 (86%), Gaps = 1/82 (1%)
 Strand = Plus / Minus

                                                                       
Query: 66  tactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaatgct 125
           |||||| || ||||| |||||||||| | ||||||||||||   |||||||||||| | |
Sbjct: 84  tactccctctgtaaactaatataagaccttttagatcactact-tagtgatctaaaaggt 26

                                 
Query: 126 cttatattagtttatagaggga 147
           |||||||||||||| |||||||
Sbjct: 25  cttatattagtttacagaggga 4




>54696_tae-miR1121:pmrd
          Length = 98

 Score = 58.0 bits (29), Expect = 3e-09
 Identities = 74/89 (83%)
 Strand = Plus / Minus

                                                                       
Query: 64  agtactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaatg 123
           |||||||| ||||||||  ||||||||| | ||||||||||||    |||||||||||  
Sbjct: 95  agtactccctccgtaaagaaatataagagcgtttagatcactacttaagtgatctaaaca 36

                                        
Query: 124 ctcttatattagtttatagagggagtaca 152
           |||| |||||  |||| ||||||||||||
Sbjct: 35  ctctaatatttctttacagagggagtaca 7



 Score = 58.0 bits (29), Expect = 3e-09
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                    
Query: 95  tttagatcactaaaatagtgatctaaatgctcttatattagtttatagagggagtac 151
           ||||||||||| || |||||||||||| |||||||||||  ||||  ||||||||||
Sbjct: 38  tttagatcacttaagtagtgatctaaacgctcttatatttctttacggagggagtac 94




>48304_ave-miR1120:pmrd
          Length = 85

 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                      
Query: 109 atagtgatctaaatgctcttatattagtttatagagggagtac 151
           ||||||||||||| |||||||||||  |||| |||||||||||
Sbjct: 45  atagtgatctaaacgctcttatatttctttacagagggagtac 3



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 71/87 (81%), Gaps = 6/87 (6%)
 Strand = Plus / Plus

                                                                       
Query: 64  agtactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaatg 123
           |||||||| || |||||  ||||||||| | ||||||||||||      ||||||||| |
Sbjct: 2   agtactccctctgtaaagaaatataagagcgtttagatcacta------tgatctaaacg 55

                                      
Query: 124 ctcttatattagtttatagagggagta 150
           ||||||||||  |||| ||||||||||
Sbjct: 56  ctcttatatttctttacagagggagta 82




>49155_osa-miR1862d:pmrd
          Length = 150

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 6  gtactccctctgtcccaaaataa 28
          |||||||||||||||||||||||
Sbjct: 28 gtactccctctgtcccaaaataa 50