miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>54697_tae-miR1122:pmrd
          Length = 295

 Score = 95.6 bits (48), Expect = 1e-20
 Identities = 51/52 (98%)
 Strand = Plus / Plus

                                                               
Query: 68  actacatacggatgtatatagacatactttagagtgtagattcactcatttt 119
           |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 179 actacatacggatgtatatagacatattttagagtgtagattcactcatttt 230




>54701_tae-miR1126:pmrd
          Length = 164

 Score = 83.8 bits (42), Expect = 5e-17
 Identities = 137/166 (82%), Gaps = 2/166 (1%)
 Strand = Plus / Minus

                                                                       
Query: 18  atactccctccgttcctaaatataagtctttaaagaggtttcattagtggactacatacg 77
           |||||||||||||| ||||||||||||||||  |||| ||| | || || || |||||||
Sbjct: 164 atactccctccgtttctaaatataagtctttgtagagattttacta-tgaaccacatacg 106

                                                                       
Query: 78  gatgtatatagacatactttagagtgtagattcactcattttgctccttatgtggactcc 137
            |||||| ||||   | ||||||||||||||||| | |||||||||| ||||| | | | 
Sbjct: 105 aatgtatgtagatgcattttagagtgtagattcatttattttgctccgtatgtagtc-ca 47

                                                         
Query: 138 taatgaaatatcttaaaagacttatatttacgaacggagggagtac 183
           || || ||| |||  ||||||||||||||| |||||||| ||||||
Sbjct: 46  tagtggaatttctataaagacttatatttaggaacggagagagtac 1



 Score = 58.0 bits (29), Expect = 3e-09
 Identities = 54/61 (88%), Gaps = 1/61 (1%)
 Strand = Plus / Plus

                                                                      
Query: 19 tactccctccgttcctaaatataagtctttaaagaggtttcattagtggactacatacgg 78
          ||||| ||||||||||||||||||||||||| |||  || || || ||||||||||||||
Sbjct: 2  tactctctccgttcctaaatataagtctttatagaaattccacta-tggactacatacgg 60

           
Query: 79 a 79
          |
Sbjct: 61 a 61



 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 153 aaagacttatatttacgaacggagggagta 182
           |||||||||||||||  |||||||||||||
Sbjct: 134 aaagacttatatttagaaacggagggagta 163




>50531_osa-miRf11316-akr:pmrd
          Length = 82

 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 19 tactccctccgttcctaaatataag 43
          |||||||||||||||||||||||||
Sbjct: 6  tactccctccgttcctaaatataag 30



 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 158 cttatatttacgaacggagggagtac 183
           |||||||||| |||||||||||||||
Sbjct: 30  cttatatttaggaacggagggagtac 5



 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                    
Query: 18 atactccctccgttcctaaatataag 43
          |||||||||| |||||||||||||||
Sbjct: 78 atactccctctgttcctaaatataag 53




>50827_osa-miRf11612-akr:pmrd
          Length = 126

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 19  tactccctccgttcctaaatataagt 44
           |||||||||||| |||||||||||||
Sbjct: 126 tactccctccgtccctaaatataagt 101




>49712_osa-miRf10497-akr:pmrd
          Length = 172

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 18 atactccctccgttcctaaatataag 43
          ||||||||||||| ||||||||||||
Sbjct: 1  atactccctccgtccctaaatataag 26




>51023_osa-miRf11808-akr:pmrd
          Length = 117

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 19  tactccctccgttcctaaatataag 43
           |||||||||||| ||||||||||||
Sbjct: 113 tactccctccgtccctaaatataag 89



 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 19 tactccctccgttcctaaatataa 42
          |||||||||||| |||||||||||
Sbjct: 5  tactccctccgtccctaaatataa 28




>49950_osa-miRf10735-akr:pmrd
          Length = 131

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 159 ttatatttacgaacggagggagtactag 186
           ||||||||| | ||||||||||||||||
Sbjct: 30  ttatatttagggacggagggagtactag 3



 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 19 tactccctccgttcctaaatataa 42
          |||||||||||| |||||||||||
Sbjct: 7  tactccctccgtccctaaatataa 30