miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>54697_tae-miR1122:pmrd
          Length = 295

 Score = 73.8 bits (37), Expect = 4e-14
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                       
Query: 67  ctacatgcggagcaaaatgattgaatctatactttaaaatatgtctatatacatccgtat 126
           |||||| || || ||||||| |||||||| ||| ||||||||||||||||||||||||||
Sbjct: 243 ctacatacgaagtaaaatgagtgaatctacactctaaaatatgtctatatacatccgtat 184

                
Query: 127 ctagt 131
            ||||
Sbjct: 183 gtagt 179




>54701_tae-miR1126:pmrd
          Length = 164

 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 77/91 (84%), Gaps = 2/91 (2%)
 Strand = Plus / Plus

                                                                       
Query: 16  tactccctccgttcctaaatataagtcttttaaagcgatttcactaagggtctacatgcg 75
           ||||| ||||||||||||||||||||| |||| ||  ||| |||| | || |||||| ||
Sbjct: 2   tactctctccgttcctaaatataagtc-tttatagaaattccact-atggactacatacg 59

                                          
Query: 76  gagcaaaatgattgaatctatactttaaaat 106
           ||||||||| | |||||||| ||| ||||||
Sbjct: 60  gagcaaaataaatgaatctacactctaaaat 90



 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                          
Query: 15  atactccctccgttcctaaatataagtcttt 45
           |||||||||||||| ||||||||||||||||
Sbjct: 164 atactccctccgtttctaaatataagtcttt 134




>50531_osa-miRf11316-akr:pmrd
          Length = 82

 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 16 tactccctccgttcctaaatataag 40
          |||||||||||||||||||||||||
Sbjct: 6  tactccctccgttcctaaatataag 30



 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                    
Query: 15 atactccctccgttcctaaatataag 40
          |||||||||| |||||||||||||||
Sbjct: 78 atactccctctgttcctaaatataag 53




>50827_osa-miRf11612-akr:pmrd
          Length = 126

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 16  tactccctccgttcctaaatataagt 41
           |||||||||||| |||||||||||||
Sbjct: 126 tactccctccgtccctaaatataagt 101




>49712_osa-miRf10497-akr:pmrd
          Length = 172

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 15 atactccctccgttcctaaatataag 40
          ||||||||||||| ||||||||||||
Sbjct: 1  atactccctccgtccctaaatataag 26




>51023_osa-miRf11808-akr:pmrd
          Length = 117

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 16  tactccctccgttcctaaatataag 40
           |||||||||||| ||||||||||||
Sbjct: 113 tactccctccgtccctaaatataag 89



 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 16 tactccctccgttcctaaatataa 39
          |||||||||||| |||||||||||
Sbjct: 5  tactccctccgtccctaaatataa 28




>49950_osa-miRf10735-akr:pmrd
          Length = 131

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 16 tactccctccgttcctaaatataa 39
          |||||||||||| |||||||||||
Sbjct: 7  tactccctccgtccctaaatataa 30