miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>54697_tae-miR1122:pmrd
          Length = 295

 Score = 87.7 bits (44), Expect = 3e-18
 Identities = 99/116 (85%), Gaps = 1/116 (0%)
 Strand = Plus / Minus

                                                                       
Query: 23  gtactccctccgttcctaaatataagtcttttaagagatttcactaagagactacataca 82
           |||| ||||| ||||||||||||| | ||| | ||||||| ||||| | |||||||||| 
Sbjct: 293 gtacaccctctgttcctaaatatatgccttcttagagattccactatg-gactacatacg 235

                                                                   
Query: 83  aaacaaaatgagtgaatctatactttaaagtatgtctaaatacatcagtatgtagt 138
           ||  |||||||||||||||| ||| |||| |||||||| ||||||| |||||||||
Sbjct: 234 aagtaaaatgagtgaatctacactctaaaatatgtctatatacatccgtatgtagt 179




>54701_tae-miR1126:pmrd
          Length = 164

 Score = 58.0 bits (29), Expect = 3e-09
 Identities = 75/89 (84%), Gaps = 1/89 (1%)
 Strand = Plus / Plus

                                                                       
Query: 23  gtactccctccgttcctaaatataagtcttttaagagatttcactaagagactacataca 82
           |||||| ||||||||||||||||||||||||  ||| ||| ||||| | |||||||||| 
Sbjct: 1   gtactctctccgttcctaaatataagtctttatagaaattccactatg-gactacatacg 59

                                        
Query: 83  aaacaaaatgagtgaatctatactttaaa 111
            | |||||| | |||||||| ||| ||||
Sbjct: 60  gagcaaaataaatgaatctacactctaaa 88



 Score = 58.0 bits (29), Expect = 3e-09
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                        
Query: 24  tactccctccgttcctaaatataagtcttttaagagatttcacta 68
           ||||||||||||| ||||||||||||||||  |||||||| ||||
Sbjct: 163 tactccctccgtttctaaatataagtctttgtagagattttacta 119



 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 164 gacttatatttaggaacggagggagtac 191
           ||||||||||||||||||||| ||||||
Sbjct: 28  gacttatatttaggaacggagagagtac 1



 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 164 gacttatatttaggaacggagggagta 190
           ||||||||||||| |||||||||||||
Sbjct: 137 gacttatatttagaaacggagggagta 163




>50531_osa-miRf11316-akr:pmrd
          Length = 82

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 166 cttatatttaggaacggagggagtac 191
           ||||||||||||||||||||||||||
Sbjct: 30  cttatatttaggaacggagggagtac 5



 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 23 gtactccctccgttcctaaatataag 48
          ||||||||||||||||||||||||||
Sbjct: 5  gtactccctccgttcctaaatataag 30



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 24 tactccctccgttcctaaatataag 48
          ||||||||| |||||||||||||||
Sbjct: 77 tactccctctgttcctaaatataag 53



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 166 cttatatttaggaacggagggagta 190
           ||||||||||||||| |||||||||
Sbjct: 53  cttatatttaggaacagagggagta 77




>51023_osa-miRf11808-akr:pmrd
          Length = 117

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 22 tgtactccctccgttcctaaatataa 47
          |||||||||||||| |||||||||||
Sbjct: 3  tgtactccctccgtccctaaatataa 28



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 167 ttatatttaggaacggagggagtac 191
           ||||||||||| |||||||||||||
Sbjct: 28  ttatatttagggacggagggagtac 4



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 24  tactccctccgttcctaaatataag 48
           |||||||||||| ||||||||||||
Sbjct: 113 tactccctccgtccctaaatataag 89



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 166 cttatatttaggaacggagggagta 190
           |||||||||||| ||||||||||||
Sbjct: 89  cttatatttagggacggagggagta 113




>50827_osa-miRf11612-akr:pmrd
          Length = 126

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 24  tactccctccgttcctaaatataagt 49
           |||||||||||| |||||||||||||
Sbjct: 126 tactccctccgtccctaaatataagt 101



 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 165 acttatatttaggaacggagggagta 190
           ||||||||||||| ||||||||||||
Sbjct: 101 acttatatttagggacggagggagta 126




>49950_osa-miRf10735-akr:pmrd
          Length = 131

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 167 ttatatttaggaacggagggagtac 191
           ||||||||||| |||||||||||||
Sbjct: 30  ttatatttagggacggagggagtac 6



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 23 gtactccctccgttcctaaatataa 47
          ||||||||||||| |||||||||||
Sbjct: 6  gtactccctccgtccctaaatataa 30




>49712_osa-miRf10497-akr:pmrd
          Length = 172

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 166 cttatatttaggaacggagggagta 190
           |||||||||||| ||||||||||||
Sbjct: 26  cttatatttagggacggagggagta 2



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 24 tactccctccgttcctaaatataag 48
          |||||||||||| ||||||||||||
Sbjct: 2  tactccctccgtccctaaatataag 26