miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>48648_hpr-miR1120:pmrd
          Length = 85

 Score = 60.0 bits (30), Expect = 3e-10
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                
Query: 62 tagtataaagttgagacatttattttgggacggaggga 99
          ||||||||||||||| || |||||||||||||||||||
Sbjct: 40 tagtataaagttgagtcacttattttgggacggaggga 77



 Score = 52.0 bits (26), Expect = 8e-08
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                    
Query: 5  atactccctccgtcccaaaataagtg 30
          ||||||||||||||||||||||||||
Sbjct: 81 atactccctccgtcccaaaataagtg 56



 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 6  tactccctccgtcccaaaataagtg 30
          |||||||||||||||||||||||||
Sbjct: 6  tactccctccgtcccaaaataagtg 30



 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                           
Query: 67 taaagttgagacatttattttgggacggaggga 99
          |||||||||| || |||||||||||||||||||
Sbjct: 41 taaagttgagtcacttattttgggacggaggga 9




>49596_osa-miRf10381-akr:pmrd
          Length = 147

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 6  tactccctccgtcccaaaataagtg 30
          |||||||||||||||||||||||||
Sbjct: 1  tactccctccgtcccaaaataagtg 25




>50820_osa-miRf11605-akr:pmrd
          Length = 101

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 6  tactccctccgtcccaaaataagt 29
          ||||||||||||||||||||||||
Sbjct: 95 tactccctccgtcccaaaataagt 72




>50819_osa-miRf11604-akr:pmrd
          Length = 101

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 6  tactccctccgtcccaaaataagt 29
          ||||||||||||||||||||||||
Sbjct: 95 tactccctccgtcccaaaataagt 72




>50818_osa-miRf11603-akr:pmrd
          Length = 101

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 6  tactccctccgtcccaaaataagt 29
          ||||||||||||||||||||||||
Sbjct: 7  tactccctccgtcccaaaataagt 30




>49366_osa-miRf10151-akr:pmrd
          Length = 82

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 3  atatactccctccgtcccaaaata 26
          ||||||||||||||||||||||||
Sbjct: 82 atatactccctccgtcccaaaata 59




>49537_osa-miRf10322-akr:pmrd
          Length = 105

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 4  tatactccctccgtcccaaaata 26
          |||||||||||||||||||||||
Sbjct: 8  tatactccctccgtcccaaaata 30




>49536_osa-miRf10321-akr:pmrd
          Length = 105

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 4  tatactccctccgtcccaaaata 26
          |||||||||||||||||||||||
Sbjct: 8  tatactccctccgtcccaaaata 30




>49517_osa-miRf10302-akr:pmrd
          Length = 103

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 4  tatactccctccgtcccaaaata 26
          |||||||||||||||||||||||
Sbjct: 99 tatactccctccgtcccaaaata 77



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 5  atactccctccgtcccaaaata 26
          ||||||||||||||||||||||
Sbjct: 6  atactccctccgtcccaaaata 27




>49433_osa-miRf10218-akr:pmrd
          Length = 93

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 2  aatatactccctccgtcccaaaa 24
          |||||||||||||||||||||||
Sbjct: 7  aatatactccctccgtcccaaaa 29



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 5  atactccctccgtcccaaaa 24
          ||||||||||||||||||||
Sbjct: 84 atactccctccgtcccaaaa 65




>49156_osa-miR1862e:pmrd
          Length = 93

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 5  atactccctccgtcccaaaataa 27
          |||||||||||||||||||||||
Sbjct: 92 atactccctccgtcccaaaataa 70



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 80 tttattttgggacggaggga 99
          ||||||||||||||||||||
Sbjct: 69 tttattttgggacggaggga 88




>49155_osa-miR1862d:pmrd
          Length = 150

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 5   atactccctccgtcccaaaataa 27
           |||||||||||||||||||||||
Sbjct: 123 atactccctccgtcccaaaataa 101



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 80  tttattttgggacggaggga 99
           ||||||||||||||||||||
Sbjct: 100 tttattttgggacggaggga 119




>49154_osa-miR1862c:pmrd
          Length = 89

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 7  actccctccgtcccaaaataagt 29
          |||||||||||||||||||||||
Sbjct: 1  actccctccgtcccaaaataagt 23




>49152_osa-miR1862a:pmrd
          Length = 88

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 5  atactccctccgtcccaaaataa 27
          |||||||||||||||||||||||
Sbjct: 88 atactccctccgtcccaaaataa 66



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 80 tttattttgggacggaggga 99
          ||||||||||||||||||||
Sbjct: 65 tttattttgggacggaggga 84