miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>48648_hpr-miR1120:pmrd
          Length = 85

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 88  tactaaggttaagacacttattttgggacggagggagta 126
           |||||| ||| || |||||||||||||||||||||||||
Sbjct: 44  tactaaagttgagtcacttattttgggacggagggagta 6



 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 102 cacttattttgggacggagggagta 126
           |||||||||||||||||||||||||
Sbjct: 56  cacttattttgggacggagggagta 80



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                   
Query: 30 tactccctccgtcttaaaataattgtctcaactttgtacta 70
          |||||||||||||  ||||||| || ||||||||| |||||
Sbjct: 80 tactccctccgtcccaaaataagtgactcaactttatacta 40




>49596_osa-miRf10381-akr:pmrd
          Length = 147

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 102 cacttattttgggacggagggagta 126
           |||||||||||||||||||||||||
Sbjct: 25  cacttattttgggacggagggagta 1




>50820_osa-miRf11605-akr:pmrd
          Length = 101

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 103 acttattttgggacggagggagta 126
           ||||||||||||||||||||||||
Sbjct: 72  acttattttgggacggagggagta 95




>50819_osa-miRf11604-akr:pmrd
          Length = 101

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 103 acttattttgggacggagggagta 126
           ||||||||||||||||||||||||
Sbjct: 72  acttattttgggacggagggagta 95




>50818_osa-miRf11603-akr:pmrd
          Length = 101

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 103 acttattttgggacggagggagta 126
           ||||||||||||||||||||||||
Sbjct: 30  acttattttgggacggagggagta 7




>49154_osa-miR1862c:pmrd
          Length = 89

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 103 acttattttgggacggagggagt 125
           |||||||||||||||||||||||
Sbjct: 23  acttattttgggacggagggagt 1




>54757_tmo-miR1122:pmrd
          Length = 180

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 107 attttgggacggagggagtaca 128
           ||||||||||||||||||||||
Sbjct: 45  attttgggacggagggagtaca 24




>49818_osa-miRf10603-akr:pmrd
          Length = 97

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 106 tattttgggacggagggagtac 127
           ||||||||||||||||||||||
Sbjct: 72  tattttgggacggagggagtac 93




>49784_osa-miRf10569-akr:pmrd
          Length = 132

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 105 ttattttgggacggagggagta 126
           ||||||||||||||||||||||
Sbjct: 32  ttattttgggacggagggagta 11




>49783_osa-miRf10568-akr:pmrd
          Length = 132

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 105 ttattttgggacggagggagta 126
           ||||||||||||||||||||||
Sbjct: 32  ttattttgggacggagggagta 11




>49637_osa-miRf10422-akr:pmrd
          Length = 105

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 108 ttttgggacggagggagtacatataa 133
           |||||||||||||||||||| |||||
Sbjct: 78  ttttgggacggagggagtacgtataa 103




>49636_osa-miRf10421-akr:pmrd
          Length = 105

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 108 ttttgggacggagggagtacatataa 133
           |||||||||||||||||||| |||||
Sbjct: 78  ttttgggacggagggagtacgtataa 103




>49314_osa-miRf10099-akr:pmrd
          Length = 144

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 106 tattttgggacggagggagtac 127
           ||||||||||||||||||||||
Sbjct: 34  tattttgggacggagggagtac 13