miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>49057_osa-miR812j:pmrd
          Length = 297

 Score =  109 bits (55), Expect = 1e-24
 Identities = 110/127 (86%), Gaps = 1/127 (0%)
 Strand = Plus / Plus

                                                                       
Query: 114 aagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaatta 173
           ||||||||  |||| ||||||||||||||||| |||| ||| ||| |||||| ||||| |
Sbjct: 124 aagtcacgcataaactactattcatgttttataatctaataacaataaaaatactaatca 183

                                                                       
Query: 174 ta-aaaaatttcaaataagacagacgatcaaagttgggcgcggaaacttatggctgcatt 232
           || |||||||||||||||||| || ||| |||||||| | |||||||| |||||||| ||
Sbjct: 184 tacaaaaatttcaaataagacggatgattaaagttggacacggaaactcatggctgcgtt 243

                  
Query: 233 tattttg 239
           |||||||
Sbjct: 244 tattttg 250




>49054_osa-miR812g:pmrd
          Length = 242

 Score = 83.8 bits (42), Expect = 6e-17
 Identities = 87/101 (86%), Gaps = 2/101 (1%)
 Strand = Plus / Plus

                                                                       
Query: 111 cataagtcacgagtaaagta--ctattcatgttttatcatcttatatcaagaaaaatgct 168
           ||||||||| ||||||||||  |||||||| |||||| |||| ||| ||| |||||| ||
Sbjct: 93  cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152

                                                    
Query: 169 aattataaaaaatttcaaataagacagacgatcaaagttgg 209
           |||||||||||| || ||||||||| || ||| ||||||||
Sbjct: 153 aattataaaaaaatttaaataagacggatgattaaagttgg 193




>49053_osa-miR812f:pmrd
          Length = 179

 Score = 73.8 bits (37), Expect = 6e-14
 Identities = 82/97 (84%)
 Strand = Plus / Minus

                                                                       
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
           ||||||||||   ||||||||||||  |||||||| |||| ||| ||| ||||||  |||
Sbjct: 113 cataagtcacacataaagtactatttgtgttttataatctaataacaataaaaatattaa 54

                                                
Query: 171 ttataaaaaatttcaaataagacagacgatcaaagtt 207
           | ||||||||||| |||||| || |||||||||||||
Sbjct: 53  tcataaaaaatttaaaataaaacggacgatcaaagtt 17




>49049_osa-miR812b:pmrd
          Length = 170

 Score = 73.8 bits (37), Expect = 6e-14
 Identities = 74/85 (87%), Gaps = 1/85 (1%)
 Strand = Plus / Plus

                                                                       
Query: 115 agtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaatta- 173
           |||||||  ||||||| ||||||||||||||||||| ||| ||| |||||| ||||| | 
Sbjct: 64  agtcacgcataaagtaatattcatgttttatcatctaataacaataaaaatactaatcat 123

                                    
Query: 174 taaaaaatttcaaataagacagacg 198
           |||||| ||||||||||||| ||||
Sbjct: 124 taaaaattttcaaataagacggacg 148




>49048_osa-miR812a:pmrd
          Length = 234

 Score = 67.9 bits (34), Expect = 4e-12
 Identities = 71/82 (86%), Gaps = 1/82 (1%)
 Strand = Plus / Minus

                                                                       
Query: 124 taaagtactattcatgttttatcatcttatatcaagaaaaatgctaattataaaaaa-tt 182
           |||| |||||||||||||||||||| | ||| ||| ||||||  |||| |||||||| ||
Sbjct: 129 taaaatactattcatgttttatcatgtaataacaataaaaatagtaatcataaaaaattt 70

                                 
Query: 183 tcaaataagacagacgatcaaa 204
           |||||||||||  |||||||||
Sbjct: 69  tcaaataagacgaacgatcaaa 48



 Score = 44.1 bits (22), Expect = 5e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 23 ctccgtcccaaaataagtgcag 44
          ||||||||||||||||||||||
Sbjct: 3  ctccgtcccaaaataagtgcag 24




>49875_osa-miRf10660-akr:pmrd
          Length = 191

 Score = 65.9 bits (33), Expect = 1e-11
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                       
Query: 112 ataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaat 171
           ||||||||||  ||||||| || |||||||||||||||| | | ||| |||||| |||||
Sbjct: 124 ataagtcacgcataaagtattaatcatgttttatcatctaacaacaataaaaatactaat 65

                    
Query: 172 tataaaaaa 180
           |||||||||
Sbjct: 64  tataaaaaa 56




>49052_osa-miR812e:pmrd
          Length = 170

 Score = 61.9 bits (31), Expect = 2e-10
 Identities = 83/99 (83%), Gaps = 1/99 (1%)
 Strand = Plus / Minus

                                                                       
Query: 113 taagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaatt 172
           |||||||||  | ||||| |||| || ||||||||||| ||| ||| ||||||  |||| 
Sbjct: 106 taagtcacgcatgaagtaatatttatattttatcatctaataacaataaaaatagtaata 47

                                                  
Query: 173 ataaaaaatttcaaataagacagacgatcaaagttgggc 211
           | ||||| ||||||||||||| |||| ||||||||||||
Sbjct: 46  a-aaaaattttcaaataagacggacggtcaaagttgggc 9




>48800_oru-miR812:pmrd
          Length = 174

 Score = 61.9 bits (31), Expect = 2e-10
 Identities = 62/71 (87%), Gaps = 1/71 (1%)
 Strand = Plus / Plus

                                                                       
Query: 124 taaagtactattcatgttttatcatcttatatcaagaaaaatgctaattataaaaa-att 182
           |||||||||||| |||||||||||||| ||| ||| ||||||  |||| |||||||  ||
Sbjct: 77  taaagtactatttatgttttatcatctaatagcaataaaaataataatcataaaaatttt 136

                      
Query: 183 tcaaataagac 193
           |||||||||||
Sbjct: 137 tcaaataagac 147




>48793_obt-miR812:pmrd
          Length = 175

 Score = 60.0 bits (30), Expect = 9e-10
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                     
Query: 124 taaagtactattcatgttttatcatcttatatcaagaaaaat 165
           ||||||||||||||||||||||||||| ||| ||| ||||||
Sbjct: 78  taaagtactattcatgttttatcatctaataacaataaaaat 119




>50576_osa-miRf11361-akr:pmrd
          Length = 179

 Score = 56.0 bits (28), Expect = 1e-08
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                       
Query: 112 ataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaat 171
           ||||||||||  ||||||| || |||| ||||||||||| | | |||  ||||| |||||
Sbjct: 113 ataagtcacgcataaagtattaatcatattttatcatctaacaacaatgaaaatactaat 54

                       
Query: 172 tataaaaaattt 183
           ||||||||||||
Sbjct: 53  tataaaaaattt 42




>50503_osa-miRf11288-akr:pmrd
          Length = 176

 Score = 54.0 bits (27), Expect = 6e-08
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                       
Query: 114 aagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaatta 173
           ||||||||  ||||||| || |||||||||||||||| | | |||  ||||| |||||||
Sbjct: 110 aagtcacgcataaagtattaatcatgttttatcatctaacaacaatgaaaatactaatta 51

                  
Query: 174 taaaaaa 180
           |||||||
Sbjct: 50  taaaaaa 44




>50479_osa-miRf11264-akr:pmrd
          Length = 175

 Score = 54.0 bits (27), Expect = 6e-08
 Identities = 70/83 (84%), Gaps = 1/83 (1%)
 Strand = Plus / Minus

                                                                       
Query: 112 ataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaat 171
           ||||||||||  ||||||| || |||| ||||||||||| | | |||  ||||| |||||
Sbjct: 110 ataagtcacgcataaagtattaatcattttttatcatctaacaacaacgaaaatactaat 51

                                  
Query: 172 tat-aaaaaatttcaaataagac 193
           ||| ||||||||||| |||||||
Sbjct: 50  tataaaaaaatttcatataagac 28




>50468_osa-miRf11253-akr:pmrd
          Length = 177

 Score = 54.0 bits (27), Expect = 6e-08
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                       
Query: 124 taaagtactattcatgttttatcatcttatatcaagaaaaatgctaattataaaaaattt 183
           ||||||| || |||||||||||||||| | | |||  |||||  ||||||||||||||||
Sbjct: 99  taaagtattaatcatgttttatcatctaacaacaatgaaaatattaattataaaaaattt 40

                  
Query: 184 caaataa 190
           || ||||
Sbjct: 39  catataa 33




>49729_osa-miRf10514-akr:pmrd
          Length = 173

 Score = 54.0 bits (27), Expect = 6e-08
 Identities = 70/83 (84%), Gaps = 1/83 (1%)
 Strand = Plus / Minus

                                                                       
Query: 112 ataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaat 171
           ||||||||||  ||||||  || |||||||||||||||| | | |||  ||||| |||||
Sbjct: 110 ataagtcacgcataaagtgttaatcatgttttatcatctaacaacaatgaaaatactaat 51

                                  
Query: 172 tat-aaaaaatttcaaataagac 193
           ||| ||||||||||| |||||||
Sbjct: 50  tataaaaaaatttcatataagac 28




>49051_osa-miR812d:pmrd
          Length = 153

 Score = 54.0 bits (27), Expect = 6e-08
 Identities = 57/67 (85%)
 Strand = Plus / Plus

                                                                       
Query: 114 aagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaatta 173
           ||||||||  ||||||| ||||||||||||||||| | | | ||| |||||| ||||| |
Sbjct: 53  aagtcacgcataaagtattattcatgttttatcatataagaacaataaaaatactaatca 112

                  
Query: 174 taaaaaa 180
           |||||||
Sbjct: 113 taaaaaa 119




>51125_osa-miRf11910-akr:pmrd
          Length = 174

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 51/58 (87%), Gaps = 1/58 (1%)
 Strand = Plus / Minus

                                                                     
Query: 137 atgttttatcatcttatatcaagaaaaatgctaattataa-aaaatttcaaataagac 193
           |||||||||||||| | | ||| |||||| |||||||||| ||||||||| |||||||
Sbjct: 85  atgttttatcatctaacaacaataaaaatactaattataaaaaaatttcatataagac 28




>50253_osa-miRf11038-akr:pmrd
          Length = 172

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                     
Query: 136 catgttttatcatcttatatcaagaaaaatgctaattataaaaaatttcaaataagac 193
           ||||||||||||||| | | |||  ||||| |||||||||||||| |||| |||||||
Sbjct: 85  catgttttatcatctaacaacaatgaaaatactaattataaaaaaattcatataagac 28




>50252_osa-miRf11037-akr:pmrd
          Length = 172

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                     
Query: 136 catgttttatcatcttatatcaagaaaaatgctaattataaaaaatttcaaataagac 193
           ||||||||||||||| | | |||  ||||| |||||||||||||| |||| |||||||
Sbjct: 85  catgttttatcatctaacaacaatgaaaatactaattataaaaaaattcatataagac 28




>50251_osa-miRf11036-akr:pmrd
          Length = 179

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                     
Query: 136 catgttttatcatcttatatcaagaaaaatgctaattataaaaaatttcaaataagac 193
           ||||||||||||||| | | |||  ||||| |||||||||||||| |||| |||||||
Sbjct: 89  catgttttatcatctaacaacaatgaaaatactaattataaaaaaattcatataagac 32




>50030_osa-miRf10815-akr:pmrd
          Length = 175

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 87/106 (82%), Gaps = 1/106 (0%)
 Strand = Plus / Minus

                                                                       
Query: 114 aagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaatta 173
           ||||||||  |||| || || |||||||||||||||| | | |||  ||||| | |||||
Sbjct: 108 aagtcacgtataaaatattaatcatgttttatcatctaacaacaatgaaaatacaaatta 49

                                                         
Query: 174 taaaaaa-tttcaaataagacagacgatcaaagttgggcgcggaaa 218
           ||||||| ||||| ||||||| |||  |||||||||| | ||||||
Sbjct: 48  taaaaaaatttcatataagacggacagtcaaagttggacacggaaa 3




>49056_osa-miR812i:pmrd
          Length = 242

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 45/50 (90%), Gaps = 1/50 (2%)
 Strand = Plus / Minus

                                                             
Query: 160 aaaaatgctaattataaaaaa-tttcaaataagacagacgatcaaagttg 208
           |||||| ||||| |||||||| |||||||||||||||| |||| ||||||
Sbjct: 98  aaaaatactaatcataaaaaagtttcaaataagacagatgatctaagttg 49




>50829_osa-miRf11614-akr:pmrd
          Length = 179

 Score = 50.1 bits (25), Expect = 9e-07
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                    
Query: 124 taaagtactattcatgttttatcatcttatatcaagaaaaatgctaattataaaaaa 180
           ||||||| || |||||||||||||||| | | ||| ||||||  |||||||||||||
Sbjct: 100 taaagtattaatcatgttttatcatctaacagcaataaaaatattaattataaaaaa 44




>49912_osa-miRf10697-akr:pmrd
          Length = 183

 Score = 50.1 bits (25), Expect = 9e-07
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                            
Query: 135 tcatgttttatcatcttatatcaagaaaaatgctaattataaaaaattt 183
           |||||||||||||||| | | |||  ||||| |||||||||||||||||
Sbjct: 87  tcatgttttatcatctaacaacaatgaaaatactaattataaaaaattt 39



 Score = 44.1 bits (22), Expect = 5e-05
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 112 ataagtcacgagtaaagtactattcatgttttatcatcttatatca 157
           ||||||||||  ||||||| || |||||||||||||| || |||||
Sbjct: 120 ataagtcacgcataaagtattaatcatgttttatcatgttttatca 75




>49911_osa-miRf10696-akr:pmrd
          Length = 185

 Score = 50.1 bits (25), Expect = 9e-07
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                            
Query: 135 tcatgttttatcatcttatatcaagaaaaatgctaattataaaaaattt 183
           |||||||||||||||| | | |||  ||||| |||||||||||||||||
Sbjct: 98  tcatgttttatcatctaacaacaatgaaaatactaattataaaaaattt 146



 Score = 44.1 bits (22), Expect = 5e-05
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                         
Query: 112 ataagtcacgagtaaagtactattcatgttttatcatcttatatca 157
           ||||||||||  ||||||| || |||||||||||||| || |||||
Sbjct: 65  ataagtcacgcataaagtattaatcatgttttatcatgttttatca 110




>49055_osa-miR812h:pmrd
          Length = 187

 Score = 50.1 bits (25), Expect = 9e-07
 Identities = 62/73 (84%), Gaps = 1/73 (1%)
 Strand = Plus / Minus

                                                                       
Query: 140 ttttatcatcttatatcaagaaaaatgctaattataaaaaatttcaaataagacagacga 199
           |||||| |||| ||| ||| |||||| ||| ||||||||| || ||||||| ||||| ||
Sbjct: 113 ttttataatctcataacaataaaaatactatttataaaaagtt-caaataaaacagatga 55

                        
Query: 200 tcaaagttgggcg 212
           | |||||||||||
Sbjct: 54  ttaaagttgggcg 42




>49444_osa-miRf10229-akr:pmrd
          Length = 72

 Score = 48.1 bits (24), Expect = 4e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 23 ctccgtcccaaaataagtgcagcc 46
          ||||||||||||||||||||||||
Sbjct: 66 ctccgtcccaaaataagtgcagcc 43




>51120_osa-miRf11905-akr:pmrd
          Length = 174

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 112 ataagtcacgagtaaagtactattcatgttttatcatct 150
           ||||||||||  ||||||| || ||||||||||||||||
Sbjct: 110 ataagtcacgtataaagtattaatcatgttttatcatct 72




>50423_osa-miRf11208-akr:pmrd
          Length = 175

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 56/67 (83%)
 Strand = Plus / Minus

                                                                       
Query: 114 aagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaatta 173
           ||||||||  ||||||| || |||| ||||||||||| | | |||  ||||| |||||||
Sbjct: 109 aagtcacgcataaagtattaatcatattttatcatctaacaacaatgaaaatactaatta 50

                  
Query: 174 taaaaaa 180
           |||||||
Sbjct: 49  taaaaaa 43




>48792_obr-miR812:pmrd
          Length = 174

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 124 taaagtactattcatgttttatcatct 150
           |||||||||||||||| ||||||||||
Sbjct: 76  taaagtactattcatgatttatcatct 102




>50597_osa-miRf11382-akr:pmrd
          Length = 178

 Score = 44.1 bits (22), Expect = 5e-05
 Identities = 86/106 (81%), Gaps = 1/106 (0%)
 Strand = Plus / Plus

                                                                       
Query: 114 aagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaatta 173
           ||||||||  |||| || || ||||||||||| |||| | | ||| |||||| | |||||
Sbjct: 68  aagtcacgcataaaatattaatcatgttttataatctaacaacaataaaaatacaaatta 127

                                                         
Query: 174 t-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaa 218
           | ||||||||||| |||| || |||  |||||||||| | ||||||
Sbjct: 128 taaaaaaatttcatataaaacggacagtcaaagttggacacggaaa 173




>49596_osa-miRf10381-akr:pmrd
          Length = 147

 Score = 44.1 bits (22), Expect = 5e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 23 ctccgtcccaaaataagtgcag 44
          ||||||||||||||||||||||
Sbjct: 7  ctccgtcccaaaataagtgcag 28



 Score = 40.1 bits (20), Expect = 9e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 23  ctccgtcccaaaataagtgcagcc 46
           |||| |||||||||||||||||||
Sbjct: 141 ctccatcccaaaataagtgcagcc 118




>51166_osa-miRf11951-akr:pmrd
          Length = 174

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 61/73 (83%), Gaps = 1/73 (1%)
 Strand = Plus / Plus

                                                                       
Query: 132 tattcatgttttatcatcttatatcaagaaaaatgctaattataaaaaatttcaaataag 191
           ||||||| ||||||||||| | |  ||  ||||| ||||||| ||||||||||| |||||
Sbjct: 84  tattcatattttatcatctaaaaataatgaaaatactaatta-aaaaaatttcatataag 142

                        
Query: 192 acagacgatcaaa 204
           || |||| |||||
Sbjct: 143 acggacggtcaaa 155




>50624_osa-miRf11409-akr:pmrd
          Length = 167

 Score = 40.1 bits (20), Expect = 9e-04
 Identities = 57/68 (83%), Gaps = 1/68 (1%)
 Strand = Plus / Minus

                                                                       
Query: 126 aagtactattcatgttttatcatcttatatcaagaaaaatgctaattataa-aaaatttc 184
           ||||| || ||||||||||| |||| | |  || |||||| |||||||||| ||||||||
Sbjct: 99  aagtattaatcatgttttattatctaacaataataaaaatactaattataaaaaaatttc 40

                   
Query: 185 aaataaga 192
           | ||||||
Sbjct: 39  atataaga 32