miRNEST 2.0, an integrative microRNA resource :: BLAST
>54387_rco-miR162:pmrd
Length = 96
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 95 tgaatcgatcgataaacctctgcatccagc 124
||||||||||||||||||||||||||||||
Sbjct: 67 tgaatcgatcgataaacctctgcatccagc 96
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 32 tggaggcagcggttcatcgatctcttc 58
|||||||||||||||||||||||||||
Sbjct: 4 tggaggcagcggttcatcgatctcttc 30
>48545_gma-miR162a:pmrd
Length = 102
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 95 tgaatcgatcgataaacctctgcatccagc 124
||||||||||||||||||||||||||||||
Sbjct: 65 tgaatcgatcgataaacctctgcatccagc 94
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 32 tggaggcagcggttcatcgatctcttc 58
|||| ||||||||||||||||||||||
Sbjct: 11 tggatgcagcggttcatcgatctcttc 37
>48493_ghr-miR162a:pmrd
Length = 148
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 95 tgaatcgatcgataaacctctgcatccagc 124
||||||||||||||||||||||||||||||
Sbjct: 86 tgaatcgatcgataaacctctgcatccagc 115
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 32 tggaggcagcggttcatcgatctcttc 58
|||||||||||||||||||||||||||
Sbjct: 25 tggaggcagcggttcatcgatctcttc 51
>48423_cpa-miR162a:pmrd
Length = 109
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 95 tgaatcgatcgataaacctctgcatccagc 124
||||||||||||||||||||||||||||||
Sbjct: 72 tgaatcgatcgataaacctctgcatccagc 101
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 32 tggaggcagcggttcatcgatctcttc 58
|||||||||||||||||||||||||||
Sbjct: 14 tggaggcagcggttcatcgatctcttc 40
>48682_llu-miR162:pmrd
Length = 80
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 95 tgaatcgatcgataaacctctgcatccag 123
|||||||||||||||||||||||||||||
Sbjct: 52 tgaatcgatcgataaacctctgcatccag 80
>47354_ath-miRf10254-akr:pmrd
Length = 115
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 96 gaatcgatcgataaacctctgcatccagc 124
|||||||||||||||||||||||||||||
Sbjct: 42 gaatcgatcgataaacctctgcatccagc 14
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 32 tggaggcagcggttcatcgatc 53
||||||||||||||||||||||
Sbjct: 101 tggaggcagcggttcatcgatc 80
>46938_ath-miR162b:pmrd
Length = 111
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 96 gaatcgatcgataaacctctgcatccagc 124
|||||||||||||||||||||||||||||
Sbjct: 72 gaatcgatcgataaacctctgcatccagc 100
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 tggaggcagcggttcatcgatc 53
||||||||||||||||||||||
Sbjct: 13 tggaggcagcggttcatcgatc 34
>48834_osa-miR162a:pmrd
Length = 171
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 96 gaatcgatcgataaacctctgcatccag 123
||||||||||||||||||||||||||||
Sbjct: 136 gaatcgatcgataaacctctgcatccag 163
>52400_ptc-miRf10578-akr:pmrd
Length = 103
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 32 tggaggcagcggttcatcgatctcttc 58
|||||||||||||||||||||||||||
Sbjct: 94 tggaggcagcggttcatcgatctcttc 68
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 95 tgaatcgatcgataaacctctgcatccagc 124
|||| |||||||||||||||||||||||||
Sbjct: 36 tgaaccgatcgataaacctctgcatccagc 7
>52399_ptc-miRf10577-akr:pmrd
Length = 103
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 32 tggaggcagcggttcatcgatctcttc 58
|||||||||||||||||||||||||||
Sbjct: 94 tggaggcagcggttcatcgatctcttc 68
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 95 tgaatcgatcgataaacctctgcatccagc 124
|||| |||||||||||||||||||||||||
Sbjct: 36 tgaaccgatcgataaacctctgcatccagc 7
>51616_ptc-miR162a:pmrd
Length = 107
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 32 tggaggcagcggttcatcgatctcttc 58
|||||||||||||||||||||||||||
Sbjct: 12 tggaggcagcggttcatcgatctcttc 38
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 95 tgaatcgatcgataaacctctgcatccagc 124
|||| |||||||||||||||||||||||||
Sbjct: 70 tgaaccgatcgataaacctctgcatccagc 99
>46937_ath-miR162a:pmrd
Length = 140
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 32 tggaggcagcggttcatcgatctcttc 58
|||||||||||||||||||||||||||
Sbjct: 26 tggaggcagcggttcatcgatctcttc 52
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 95 tgaatcgatcgataaacctctgcatccagc 124
||||| ||||||||||||||||||||||||
Sbjct: 81 tgaatagatcgataaacctctgcatccagc 110
>54784_vvi-miR162:pmrd
Length = 103
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 96 gaatcgatcgataaacctctgcatccagc 124
|||||| ||||||||||||||||||||||
Sbjct: 66 gaatcggtcgataaacctctgcatccagc 94
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 32 tggaggcagcggttcatcgatctcttc 58
|||| ||||||||||||||||||||||
Sbjct: 10 tggatgcagcggttcatcgatctcttc 36
>48707_mtr-miR162d:pmrd
Length = 87
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 95 tgaatcgatcgataaacctctgcatccag 123
||||||| |||||||||||||||||||||
Sbjct: 59 tgaatcggtcgataaacctctgcatccag 87
>54948_zma-miR162b:pmrd
Length = 130
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 96 gaatcgatcgataaacctctgcatccag 123
|||||| |||||||||||||||||||||
Sbjct: 103 gaatcggtcgataaacctctgcatccag 130
>54542_sly-miR162:pmrd
Length = 99
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 96 gaatcgatcgataaacctctgcatccag 123
|||||| |||||||||||||||||||||
Sbjct: 72 gaatcggtcgataaacctctgcatccag 99
>52498_ptc-miRf10676-akr:pmrd
Length = 101
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 100 cgatcgataaacctctgcatccag 123
||||||||||||||||||||||||
Sbjct: 30 cgatcgataaacctctgcatccag 7
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 32 tggaggcagcggttcatcgatct 54
|||||||||||||||||||||||
Sbjct: 93 tggaggcagcggttcatcgatct 71
>52497_ptc-miRf10675-akr:pmrd
Length = 105
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 100 cgatcgataaacctctgcatccag 123
||||||||||||||||||||||||
Sbjct: 32 cgatcgataaacctctgcatccag 9
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 32 tggaggcagcggttcatcgatct 54
|||||||||||||||||||||||
Sbjct: 95 tggaggcagcggttcatcgatct 73
>52244_ptc-miRf10422-akr:pmrd
Length = 105
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 100 cgatcgataaacctctgcatccag 123
||||||||||||||||||||||||
Sbjct: 32 cgatcgataaacctctgcatccag 9
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 32 tggaggcagcggttcatcgatct 54
|||||||||||||||||||||||
Sbjct: 95 tggaggcagcggttcatcgatct 73
>52243_ptc-miRf10421-akr:pmrd
Length = 101
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 100 cgatcgataaacctctgcatccag 123
||||||||||||||||||||||||
Sbjct: 30 cgatcgataaacctctgcatccag 7
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 32 tggaggcagcggttcatcgatct 54
|||||||||||||||||||||||
Sbjct: 93 tggaggcagcggttcatcgatct 71
>51618_ptc-miR162c:pmrd
Length = 107
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 100 cgatcgataaacctctgcatccag 123
||||||||||||||||||||||||
Sbjct: 75 cgatcgataaacctctgcatccag 98
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 32 tggaggcagcggttcatcgatct 54
|||||||||||||||||||||||
Sbjct: 12 tggaggcagcggttcatcgatct 34
>51617_ptc-miR162b:pmrd
Length = 107
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 100 cgatcgataaacctctgcatccag 123
||||||||||||||||||||||||
Sbjct: 75 cgatcgataaacctctgcatccag 98
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 32 tggaggcagcggttcatcgatct 54
|||||||||||||||||||||||
Sbjct: 12 tggaggcagcggttcatcgatct 34
>48836_osa-miR162m:pmrd
Length = 114
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 96 gaatcgatcgataaacctctgcatccag 123
|||||||||||||| |||||||||||||
Sbjct: 87 gaatcgatcgataagcctctgcatccag 114
>48835_osa-miR162b:pmrd
Length = 134
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 96 gaatcgatcgataaacctctgcatccag 123
|||||||||||||| |||||||||||||
Sbjct: 97 gaatcgatcgataagcctctgcatccag 124
>48706_mtr-miR162c:pmrd
Length = 86
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 95 tgaatcgatcgataaacctctgcatcca 122
||||||| ||||||||||||||||||||
Sbjct: 28 tgaatcggtcgataaacctctgcatcca 1
>48705_mtr-miR162b:pmrd
Length = 85
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 95 tgaatcgatcgataaacctctgcatcca 122
||||||| ||||||||||||||||||||
Sbjct: 58 tgaatcggtcgataaacctctgcatcca 85
>48685_lsa-miR162:pmrd
Length = 89
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 103 tcgataaacctctgcatccagc 124
||||||||||||||||||||||
Sbjct: 1 tcgataaacctctgcatccagc 22
>48546_gma-miR162m:pmrd
Length = 367
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 103 tcgataaacctctgcatccagc 124
||||||||||||||||||||||
Sbjct: 1 tcgataaacctctgcatccagc 22
>48690_mdo-miR162:pmrd
Length = 88
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 95 tgaatcgatcgataaacctctgcatccag 123
||||||| ||||||||||| |||||||||
Sbjct: 60 tgaatcggtcgataaacctttgcatccag 88
