miRNEST 2.0, an integrative microRNA resource :: BLAST
>48542_gma-miR160a:pmrd
Length = 119
Score = 143 bits (72), Expect = 3e-35
Identities = 87/92 (94%)
Strand = Plus / Plus
Query: 1 tgtgtatgtgcctggctccctgtatgccatttggagagctcatcgaaacatcaatgatct 60
||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||
Sbjct: 13 tgtgtatgtgcctggctccctgtatgccatttgtagagctcatcgaagcatcaatgacct 72
Query: 61 ctttggatggcgtatgaggagccaagcatatt 92
| |||||||||||||||||||||||||||||
Sbjct: 73 ttgtggatggcgtatgaggagccaagcatatt 104
>48704_mtr-miR160e:pmrd
Length = 91
Score = 101 bits (51), Expect = 9e-23
Identities = 81/91 (89%)
Strand = Plus / Plus
Query: 4 gtatgtgcctggctccctgtatgccatttggagagctcatcgaaacatcaatgatctctt 63
||||||||||||||||||||||||||| | ||||||| |||| |||||||| || |
Sbjct: 1 gtatgtgcctggctccctgtatgccatatatgaagctcattgaaaaatcaatgacctttg 60
Query: 64 tggatggcgtatgaggagccaagcatattcc 94
|||||||||||||||||||||||||||||||
Sbjct: 61 tggatggcgtatgaggagccaagcatattcc 91
>48702_mtr-miR160b:pmrd
Length = 91
Score = 101 bits (51), Expect = 9e-23
Identities = 81/91 (89%)
Strand = Plus / Plus
Query: 4 gtatgtgcctggctccctgtatgccatttggagagctcatcgaaacatcaatgatctctt 63
||||||||||||||||||||||||||| | ||||||| |||| |||||||| || |
Sbjct: 1 gtatgtgcctggctccctgtatgccatatatgaagctcattgaaaaatcaatgacctttg 60
Query: 64 tggatggcgtatgaggagccaagcatattcc 94
|||||||||||||||||||||||||||||||
Sbjct: 61 tggatggcgtatgaggagccaagcatattcc 91
>51609_ptc-miR160b:pmrd
Length = 98
Score = 81.8 bits (41), Expect = 8e-17
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 5 tatgtgcctggctccctgtatgccatttggagagctcatcgaaacatcaatgatctcttt 64
||||||||||||||||||||||||||||| ||||| || || | | || ||| ||| |
Sbjct: 7 tatgtgcctggctccctgtatgccatttgcagagcccaacggatcctcgatggcctccgt 66
Query: 65 ggatggcgtatgaggagccaagcatattc 93
|||||||||||||||||||| ||||||||
Sbjct: 67 ggatggcgtatgaggagccatgcatattc 95
>51610_ptc-miR160c:pmrd
Length = 98
Score = 73.8 bits (37), Expect = 2e-14
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 5 tatgtgcctggctccctgtatgccatttggagagctcatcgaaacatcaatgatctcttt 64
||||||||||||||||||||||||||||| ||||| || || | || ||| ||| |
Sbjct: 7 tatgtgcctggctccctgtatgccatttgcagagcccaccggttcttcgatggcctccgt 66
Query: 65 ggatggcgtatgaggagccaagcatattc 93
|||||||||||||||||||| ||||||||
Sbjct: 67 ggatggcgtatgaggagccatgcatattc 95
>54783_vvi-miR160f:pmrd
Length = 102
Score = 69.9 bits (35), Expect = 3e-13
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 9 tgcctggctccctgtatgccatttggagagctcatcgaaacatcaatgatctctttggat 68
||||||||||||||||||||||||| ||||| || || ||||| ||| || |||||
Sbjct: 11 tgcctggctccctgtatgccatttgcagagcccaccggcacatcgatggccttcgtggat 70
Query: 69 ggcgtatgaggagccaagcatat 91
|||||||||||||||| ||||||
Sbjct: 71 ggcgtatgaggagccatgcatat 93
>47213_ath-miRf10113-akr:pmrd
Length = 85
Score = 61.9 bits (31), Expect = 8e-11
Identities = 71/83 (85%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 9 tgcctggctccctgtatgccatttggagagctcatcgaaacatcaatgatctctttggat 68
|||||||||||||||||||||| || |||| |||||| ||| |||| ||| |||||
Sbjct: 4 tgcctggctccctgtatgccatatgctgagcccatcgagt-atcgatgacctccgtggat 62
Query: 69 ggcgtatgaggagccaagcatat 91
|||||||||||||||| ||||||
Sbjct: 63 ggcgtatgaggagccatgcatat 85
>46934_ath-miR160a:pmrd
Length = 85
Score = 61.9 bits (31), Expect = 8e-11
Identities = 71/83 (85%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 9 tgcctggctccctgtatgccatttggagagctcatcgaaacatcaatgatctctttggat 68
|||||||||||||||||||||| || |||| |||||| ||| |||| ||| |||||
Sbjct: 4 tgcctggctccctgtatgccatatgctgagcccatcgagt-atcgatgacctccgtggat 62
Query: 69 ggcgtatgaggagccaagcatat 91
|||||||||||||||| ||||||
Sbjct: 63 ggcgtatgaggagccatgcatat 85
>54541_sly-miR160a:pmrd
Length = 129
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 67 atggcgtatgaggagccaagcatattcc 94
||||||||||||||||||||||||||||
Sbjct: 81 atggcgtatgaggagccaagcatattcc 108
Score = 54.0 bits (27), Expect = 2e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 4 gtatgtgcctggctccctgtatgccatttggagagctca 42
|||| ||||||||||||||||||||||||| | ||||||
Sbjct: 15 gtatatgcctggctccctgtatgccatttgcaaagctca 53
>48703_mtr-miR160d:pmrd
Length = 91
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 7 tgtgcctggctccctgtatgccatttggagag 38
||||||||||||||||||||||||||| ||||
Sbjct: 4 tgtgcctggctccctgtatgccatttgtagag 35
>51615_ptc-miR160h:pmrd
Length = 98
Score = 52.0 bits (26), Expect = 7e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 7 tgtgcctggctccctgtatgccatttggagagctcatc 44
|||||||||||||||| |||||||||| | ||||||||
Sbjct: 9 tgtgcctggctccctgcatgccatttgcatagctcatc 46
>54781_vvi-miR160d:pmrd
Length = 102
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 9 tgcctggctccctgtatgccatttg 33
|||||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccatttg 35
>46865_aqc-miR160b:pmrd
Length = 82
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 9 tgcctggctccctgtatgccatttg 33
|||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccatttg 25
>54940_zma-miR160c:pmrd
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 6 atgtgcctggctccctgtatgcca 29
||||||||||||||||||||||||
Sbjct: 4 atgtgcctggctccctgtatgcca 27
>48828_osa-miR160c:pmrd
Length = 99
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 6 atgtgcctggctccctgtatgcca 29
||||||||||||||||||||||||
Sbjct: 4 atgtgcctggctccctgtatgcca 27
>54939_zma-miR160b:pmrd
Length = 121
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 7 tgtgcctggctccctgtatgcca 29
|||||||||||||||||||||||
Sbjct: 19 tgtgcctggctccctgtatgcca 41
>54780_vvi-miR160c:pmrd
Length = 106
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 7 tgtgcctggctccctgtatgcca 29
|||||||||||||||||||||||
Sbjct: 9 tgtgcctggctccctgtatgcca 31
>48826_osa-miR160a:pmrd
Length = 88
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 7 tgtgcctggctccctgtatgcca 29
|||||||||||||||||||||||
Sbjct: 2 tgtgcctggctccctgtatgcca 24
>48791_oba-miR160:pmrd
Length = 90
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 7 tgtgcctggctccctgtatgcca 29
|||||||||||||||||||||||
Sbjct: 2 tgtgcctggctccctgtatgcca 24
>54938_zma-miR160a:pmrd
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 gtgcctggctccctgtatgcca 29
||||||||||||||||||||||
Sbjct: 9 gtgcctggctccctgtatgcca 30
>54574_smo-miR160a:pmrd
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 tgcctggctccctgtatgccat 30
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccat 32
>48827_osa-miR160b:pmrd
Length = 139
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 gtgcctggctccctgtatgcca 29
||||||||||||||||||||||
Sbjct: 29 gtgcctggctccctgtatgcca 50
>48397_bra-miR160a:pmrd
Length = 127
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 tgcctggctccctgtatgccat 30
||||||||||||||||||||||
Sbjct: 26 tgcctggctccctgtatgccat 47
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 67 atggcgtatgaggagccaagcatatt 92
|||||||||||||||||| |||||||
Sbjct: 83 atggcgtatgaggagccatgcatatt 108
>48396_bra-miR160a:pmrd
Length = 127
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 tgcctggctccctgtatgccat 30
||||||||||||||||||||||
Sbjct: 26 tgcctggctccctgtatgccat 47
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 67 atggcgtatgaggagccaagcatatt 92
|||||||||||||||||| |||||||
Sbjct: 83 atggcgtatgaggagccatgcatatt 108
>47338_ath-miRf10238-akr:pmrd
Length = 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 gtgcctggctccctgtatgcca 29
||||||||||||||||||||||
Sbjct: 4 gtgcctggctccctgtatgcca 25
>46935_ath-miR160b:pmrd
Length = 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 gtgcctggctccctgtatgcca 29
||||||||||||||||||||||
Sbjct: 4 gtgcctggctccctgtatgcca 25
>54947_zma-miR160m:pmrd
Length = 81
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 tgcctggctccctgtatgcca 29
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54946_zma-miR160i:pmrd
Length = 81
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 tgcctggctccctgtatgcca 29
|||||||||||||||||||||
Sbjct: 2 tgcctggctccctgtatgcca 22
>54945_zma-miR160h:pmrd
Length = 86
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 tgcctggctccctgtatgcca 29
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54944_zma-miR160g:pmrd
Length = 86
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 tgcctggctccctgtatgcca 29
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54942_zma-miR160e:pmrd
Length = 94
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 tgcctggctccctgtatgcca 29
|||||||||||||||||||||
Sbjct: 9 tgcctggctccctgtatgcca 29
>54941_zma-miR160d:pmrd
Length = 142
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 tgcctggctccctgtatgcca 29
|||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41
>54759_ttu-miR160a:pmrd
Length = 87
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 tgcctggctccctgtatgcca 29
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54675_tae-miR160:pmrd
Length = 148
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 tgcctggctccctgtatgcca 29
|||||||||||||||||||||
Sbjct: 22 tgcctggctccctgtatgcca 42
>54575_smo-miR160b:pmrd
Length = 108
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 tgcctggctccctgtatgcca 29
|||||||||||||||||||||
Sbjct: 13 tgcctggctccctgtatgcca 33
>54408_sbi-miR160e:pmrd
Length = 95
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 tgcctggctccctgtatgcca 29
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54407_sbi-miR160d:pmrd
Length = 100
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 tgcctggctccctgtatgcca 29
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54406_sbi-miR160c:pmrd
Length = 83
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 tgcctggctccctgtatgcca 29
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54405_sbi-miR160b:pmrd
Length = 82
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 tgcctggctccctgtatgcca 29
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54404_sbi-miR160a:pmrd
Length = 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 tgcctggctccctgtatgcca 29
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>53874_ptc-miRf12052-akr:pmrd
Length = 110
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 tgcctggctccctgtatgcca 29
|||||||||||||||||||||
Sbjct: 12 tgcctggctccctgtatgcca 32
>51611_ptc-miR160d:pmrd
Length = 103
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 tgcctggctccctgtatgcca 29
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>51608_ptc-miR160a:pmrd
Length = 102
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 tgcctggctccctgtatgcca 29
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>51364_ppt-miR160f:pmrd
Length = 138
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 tgcctggctccctgtatgcca 29
|||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50
>51363_ppt-miR160e:pmrd
Length = 138
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 tgcctggctccctgtatgcca 29
|||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50
>51359_ppt-miR160a:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 tgcctggctccctgtatgcca 29
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>51334_pga-miR160:pmrd
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 tgcctggctccctgtatgcca 29
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>48833_osa-miR160n:pmrd
Length = 131
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 tgcctggctccctgtatgcca 29
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>48832_osa-miR160m:pmrd
Length = 82
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 tgcctggctccctgtatgcca 29
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>48829_osa-miR160d:pmrd
Length = 142
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 tgcctggctccctgtatgcca 29
|||||||||||||||||||||
Sbjct: 8 tgcctggctccctgtatgcca 28
>48658_hvv-miR160a:pmrd
Length = 344
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 tgcctggctccctgtatgcca 29
|||||||||||||||||||||
Sbjct: 324 tgcctggctccctgtatgcca 344
>46936_ath-miR160c:pmrd
Length = 89
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 tgcctggctccctgtatgcca 29
|||||||||||||||||||||
Sbjct: 5 tgcctggctccctgtatgcca 25
>54943_zma-miR160f:pmrd
Length = 116
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 9 tgcctggctccctgtatgcc 28
||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcc 40
>54760_ttu-miR160b:pmrd
Length = 218
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 9 tgcctggctccctgtatgcc 28
||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcc 20
>54528_sce-miR160:pmrd
Length = 180
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 9 tgcctggctccctgtatgcc 28
||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcc 20
>51367_ppt-miR160i:pmrd
Length = 139
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 gcctggctccctgtatgcca 29
||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgcca 50
>51360_ppt-miR160b:pmrd
Length = 103
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 gcctggctccctgtatgcca 29
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>48830_osa-miR160e:pmrd
Length = 114
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 9 tgcctggctccctgtatgcc 28
||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcc 30
>48659_hvv-miR160b:pmrd
Length = 47
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 9 tgcctggctccctgtatgcc 28
||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcc 20
>48635_gra-miR160b:pmrd
Length = 293
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 9 tgcctggctccctgtatgcc 28
||||||||||||||||||||
Sbjct: 273 tgcctggctccctgtatgcc 292
>48634_gra-miR160a:pmrd
Length = 106
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 9 tgcctggctccctgtatgcc 28
||||||||||||||||||||
Sbjct: 86 tgcctggctccctgtatgcc 105
>48544_gma-miR160o:pmrd
Length = 503
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 9 tgcctggctccctgtatgcc 28
||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcc 20
>48543_gma-miR160n:pmrd
Length = 107
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 9 tgcctggctccctgtatgcc 28
||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcc 20
>48306_bdi-miR160:pmrd
Length = 120
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 9 tgcctggctccctgtatgcc 28
||||||||||||||||||||
Sbjct: 18 tgcctggctccctgtatgcc 37
