miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>48560_gma-miR168:pmrd
          Length = 125

 Score = 71.9 bits (36), Expect = 1e-13
 Identities = 36/36 (100%)
 Strand = Plus / Plus

                                              
Query: 14 gcggtctctaattcgcttggtgcaggtcgggaaccg 49
          ||||||||||||||||||||||||||||||||||||
Sbjct: 7  gcggtctctaattcgcttggtgcaggtcgggaaccg 42



 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                        
Query: 117 ggatcccgccttgcatcaactgaatcgga 145
           |||||||||||||||||||||||||||||
Sbjct: 84  ggatcccgccttgcatcaactgaatcgga 112




>54802_vvi-miR168:pmrd
          Length = 132

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                            
Query: 16 ggtctctaattcgcttggtgcaggtcgggaaccg 49
          ||||||||||||||||||||||||||||||||||
Sbjct: 1  ggtctctaattcgcttggtgcaggtcgggaaccg 34



 Score = 56.0 bits (28), Expect = 8e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 118 gatcccgccttgcatcaactgaatcgga 145
           ||||||||||||||||||||||||||||
Sbjct: 99  gatcccgccttgcatcaactgaatcgga 126




>54388_rco-miR168:pmrd
          Length = 156

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                            
Query: 14 gcggtctctaattcgcttggtgcaggtcgggaac 47
          ||||||||||||||||||||||||||||||||||
Sbjct: 7  gcggtctctaattcgcttggtgcaggtcgggaac 40



 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 117 ggatcccgccttgcatcaactgaatcg 143
           |||||||||||||||||||||||||||
Sbjct: 115 ggatcccgccttgcatcaactgaatcg 141




>51651_ptc-miR168b:pmrd
          Length = 136

 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                          
Query: 16 ggtctctaattcgcttggtgcaggtcgggaac 47
          ||||||||||||||||||||||||||||||||
Sbjct: 1  ggtctctaattcgcttggtgcaggtcgggaac 32



 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                        
Query: 117 ggatcccgccttgcatcaactgaatcgga 145
           |||||||||||||||||||||||||||||
Sbjct: 106 ggatcccgccttgcatcaactgaatcgga 134




>47339_ath-miRf10239-akr:pmrd
          Length = 129

 Score = 60.0 bits (30), Expect = 5e-10
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                             
Query: 112 ggatcggatcccgccttgcatcaactgaatcgga 145
           |||| |||||||||||||||||||||||||||||
Sbjct: 89  ggattggatcccgccttgcatcaactgaatcgga 122



 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 24 attcgcttggtgcaggtcgggaacc 48
          |||||||||||||||||||||||||
Sbjct: 11 attcgcttggtgcaggtcgggaacc 35




>46957_ath-miR168a:pmrd
          Length = 138

 Score = 60.0 bits (30), Expect = 5e-10
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                             
Query: 112 ggatcggatcccgccttgcatcaactgaatcgga 145
           |||| |||||||||||||||||||||||||||||
Sbjct: 94  ggattggatcccgccttgcatcaactgaatcgga 127



 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 24 attcgcttggtgcaggtcgggaacc 48
          |||||||||||||||||||||||||
Sbjct: 16 attcgcttggtgcaggtcgggaacc 40




>51650_ptc-miR168a:pmrd
          Length = 160

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                        
Query: 117 ggatcccgccttgcatcaactgaatcgga 145
           |||||||||||||||||||||||||||||
Sbjct: 130 ggatcccgccttgcatcaactgaatcgga 158



 Score = 56.0 bits (28), Expect = 8e-09
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                          
Query: 16 ggtctctaattcgcttggtgcaggtcgggaac 47
          ||||||| ||||||||||||||||||||||||
Sbjct: 1  ggtctctgattcgcttggtgcaggtcgggaac 32




>55000_zma-miR168b:pmrd
          Length = 104

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 116 cggatcccgccttgcatcaactgaatcgga 145
           |||||||||||||||||||| |||||||||
Sbjct: 62  cggatcccgccttgcatcaagtgaatcgga 91




>46958_ath-miR168b:pmrd
          Length = 124

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                            
Query: 14 gcggtctctaattcgcttggtgcaggtcgggaac 47
          ||||||||  ||||||||||||||||||||||||
Sbjct: 7  gcggtctcggattcgcttggtgcaggtcgggaac 40




>46959_ath-miR168m:pmrd
          Length = 104

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 112 ggatcggatcccgccttgcatcaactga 139
           |||| |||||||||||||||||||||||
Sbjct: 77  ggattggatcccgccttgcatcaactga 104



 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 26 tcgcttggtgcaggtcgggaacc 48
          |||||||||||||||||||||||
Sbjct: 1  tcgcttggtgcaggtcgggaacc 23




>54375_pts-miR168b:pmrd
          Length = 140

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 117 ggatcccgccttgcatcaactga 139
           |||||||||||||||||||||||
Sbjct: 118 ggatcccgccttgcatcaactga 140



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 26 tcgcttggtgcaggtcgggaac 47
          ||||||||||||||||||||||
Sbjct: 1  tcgcttggtgcaggtcgggaac 22




>54374_pts-miR168a:pmrd
          Length = 118

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 117 ggatcccgccttgcatcaactga 139
           |||||||||||||||||||||||
Sbjct: 96  ggatcccgccttgcatcaactga 118



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 26 tcgcttggtgcaggtcgggaac 47
          ||||||||||||||||||||||
Sbjct: 1  tcgcttggtgcaggtcgggaac 22




>54366_ptr-miR168:pmrd
          Length = 118

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 117 ggatcccgccttgcatcaactga 139
           |||||||||||||||||||||||
Sbjct: 96  ggatcccgccttgcatcaactga 118



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 26 tcgcttggtgcaggtcgggaac 47
          ||||||||||||||||||||||
Sbjct: 1  tcgcttggtgcaggtcgggaac 22




>48349_bna-miR168:pmrd
          Length = 133

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 112 ggatcggatcccgccttgcatcaactgaatc 142
           |||||||||||||||||| ||||| ||||||
Sbjct: 89  ggatcggatcccgccttgtatcaagtgaatc 119



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 26 tcgcttggtgcaggtcgggaac 47
          ||||||||||||||||||||||
Sbjct: 18 tcgcttggtgcaggtcgggaac 39




>54999_zma-miR168a:pmrd
          Length = 104

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 116 cggatcccgccttgcatcaactgaatcgga 145
           |||||||||||||||| ||| |||||||||
Sbjct: 62  cggatcccgccttgcaccaagtgaatcgga 91




>54637_sof-miR168b:pmrd
          Length = 103

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 116 cggatcccgccttgcatcaactgaatcgga 145
           |||||||||||||||| ||| |||||||||
Sbjct: 61  cggatcccgccttgcaccaagtgaatcgga 90




>54636_sof-miR168a:pmrd
          Length = 104

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 116 cggatcccgccttgcatcaactgaatcgga 145
           |||||||||||||||| ||| |||||||||
Sbjct: 62  cggatcccgccttgcaccaagtgaatcgga 91




>48873_osa-miR168a:pmrd
          Length = 87

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 116 cggatcccgccttgcatcaactgaatcgga 145
           |||||||||||||||| ||| |||||||||
Sbjct: 54  cggatcccgccttgcaccaagtgaatcgga 83




>48872_osa-miR168a:pmrd
          Length = 87

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 116 cggatcccgccttgcatcaactgaatcgga 145
           |||||||||||||||| ||| |||||||||
Sbjct: 54  cggatcccgccttgcaccaagtgaatcgga 83




>48871_osa-miR168a:pmrd
          Length = 87

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 116 cggatcccgccttgcatcaactgaatcgga 145
           |||||||||||||||| ||| |||||||||
Sbjct: 54  cggatcccgccttgcaccaagtgaatcgga 83




>48649_hte-miR168:pmrd
          Length = 140

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 26 tcgcttggtgcaggtcgggaac 47
          ||||||||||||||||||||||
Sbjct: 1  tcgcttggtgcaggtcgggaac 22




>54665_stu-miR168:pmrd
          Length = 133

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 26 tcgcttggtgcaggtcggga 45
          ||||||||||||||||||||
Sbjct: 1  tcgcttggtgcaggtcggga 20



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 120 tcccgccttgcatcaactga 139
           ||||||||||||||||||||
Sbjct: 114 tcccgccttgcatcaactga 133




>54546_sly-miR168:pmrd
          Length = 145

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 26 tcgcttggtgcaggtcggga 45
          ||||||||||||||||||||
Sbjct: 1  tcgcttggtgcaggtcggga 20