miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>47002_ath-miR395a:pmrd
Length = 93
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 91 cactgaagtgtttgggggaactcccgga 118
||||||||||||||||||||||||||||
Sbjct: 61 cactgaagtgtttgggggaactcccgga 88
>54860_vvi-miR395g:pmrd
Length = 86
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 92 actgaagtgtttgggggaactcccgg 117
||||||||||||||||||||||||||
Sbjct: 55 actgaagtgtttgggggaactcccgg 80
>47006_ath-miR395e:pmrd
Length = 95
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 92 actgaagtgtttgggggaactcccgg 117
||||||||||||||||||||||||||
Sbjct: 64 actgaagtgtttgggggaactcccgg 89
>47005_ath-miR395d:pmrd
Length = 100
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 91 cactgaagtgtttgggggaactcccg 116
||||||||||||||||||||||||||
Sbjct: 68 cactgaagtgtttgggggaactcccg 93
>54558_sly-miR395a:pmrd
Length = 199
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 93 ctgaagtgtttgggggaactcccgg 117
|||||||||||||||||||||||||
Sbjct: 29 ctgaagtgtttgggggaactcccgg 53
>54529_sde-miR395:pmrd
Length = 94
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 93 ctgaagtgtttgggggaactcccgg 117
|||||||||||||||||||||||||
Sbjct: 64 ctgaagtgtttgggggaactcccgg 88
>51729_ptc-miR395f:pmrd
Length = 113
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 89 ctcactgaagtgtttgggggaactc 113
|||||||||||||||||||||||||
Sbjct: 80 ctcactgaagtgtttgggggaactc 104
>51728_ptc-miR395e:pmrd
Length = 113
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 89 ctcactgaagtgtttgggggaactc 113
|||||||||||||||||||||||||
Sbjct: 80 ctcactgaagtgtttgggggaactc 104
>54859_vvi-miR395f:pmrd
Length = 86
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 91 cactgaagtgtttgggggaactcc 114
||||||||||||||||||||||||
Sbjct: 54 cactgaagtgtttgggggaactcc 77
>51725_ptc-miR395b:pmrd
Length = 98
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 91 cactgaagtgtttgggggaactcc 114
||||||||||||||||||||||||
Sbjct: 67 cactgaagtgtttgggggaactcc 90
>54866_vvi-miR395m:pmrd
Length = 92
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 92 actgaagtgtttgggggaactcc 114
|||||||||||||||||||||||
Sbjct: 61 actgaagtgtttgggggaactcc 83
>54865_vvi-miR395l:pmrd
Length = 87
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 92 actgaagtgtttgggggaactcc 114
|||||||||||||||||||||||
Sbjct: 56 actgaagtgtttgggggaactcc 78
>54864_vvi-miR395k:pmrd
Length = 92
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 92 actgaagtgtttgggggaactcc 114
|||||||||||||||||||||||
Sbjct: 60 actgaagtgtttgggggaactcc 82
>54863_vvi-miR395j:pmrd
Length = 86
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 92 actgaagtgtttgggggaactcc 114
|||||||||||||||||||||||
Sbjct: 55 actgaagtgtttgggggaactcc 77
>54862_vvi-miR395i:pmrd
Length = 86
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 92 actgaagtgtttgggggaactcc 114
|||||||||||||||||||||||
Sbjct: 55 actgaagtgtttgggggaactcc 77
>54861_vvi-miR395h:pmrd
Length = 92
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 92 actgaagtgtttgggggaactcc 114
|||||||||||||||||||||||
Sbjct: 61 actgaagtgtttgggggaactcc 83
>54858_vvi-miR395e:pmrd
Length = 92
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 92 actgaagtgtttgggggaactcc 114
|||||||||||||||||||||||
Sbjct: 61 actgaagtgtttgggggaactcc 83
>54857_vvi-miR395d:pmrd
Length = 86
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 92 actgaagtgtttgggggaactcc 114
|||||||||||||||||||||||
Sbjct: 55 actgaagtgtttgggggaactcc 77
>54856_vvi-miR395c:pmrd
Length = 92
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 92 actgaagtgtttgggggaactcc 114
|||||||||||||||||||||||
Sbjct: 61 actgaagtgtttgggggaactcc 83
>54855_vvi-miR395b:pmrd
Length = 90
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 92 actgaagtgtttgggggaactcc 114
|||||||||||||||||||||||
Sbjct: 59 actgaagtgtttgggggaactcc 81
>54854_vvi-miR395a:pmrd
Length = 92
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 92 actgaagtgtttgggggaactcc 114
|||||||||||||||||||||||
Sbjct: 61 actgaagtgtttgggggaactcc 83
>52060_ptc-miRf10238-akr:pmrd
Length = 103
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 92 actgaagtgtttgggggaactcc 114
|||||||||||||||||||||||
Sbjct: 72 actgaagtgtttgggggaactcc 94
>51733_ptc-miR395j:pmrd
Length = 102
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 92 actgaagtgtttgggggaactcc 114
|||||||||||||||||||||||
Sbjct: 72 actgaagtgtttgggggaactcc 94
>51732_ptc-miR395i:pmrd
Length = 102
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 92 actgaagtgtttgggggaactcc 114
|||||||||||||||||||||||
Sbjct: 72 actgaagtgtttgggggaactcc 94
>51731_ptc-miR395h:pmrd
Length = 102
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 92 actgaagtgtttgggggaactcc 114
|||||||||||||||||||||||
Sbjct: 72 actgaagtgtttgggggaactcc 94
>51730_ptc-miR395g:pmrd
Length = 102
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 92 actgaagtgtttgggggaactcc 114
|||||||||||||||||||||||
Sbjct: 72 actgaagtgtttgggggaactcc 94
>51727_ptc-miR395d:pmrd
Length = 101
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 92 actgaagtgtttgggggaactcc 114
|||||||||||||||||||||||
Sbjct: 71 actgaagtgtttgggggaactcc 93
>51726_ptc-miR395c:pmrd
Length = 101
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 92 actgaagtgtttgggggaactcc 114
|||||||||||||||||||||||
Sbjct: 71 actgaagtgtttgggggaactcc 93
>54559_sly-miR395b:pmrd
Length = 101
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 93 ctgaagtgtttgggggaactcc 114
||||||||||||||||||||||
Sbjct: 66 ctgaagtgtttgggggaactcc 87
>48505_ghr-miR395d:pmrd
Length = 107
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 92 actgaagtgtttgggggaactc 113
||||||||||||||||||||||
Sbjct: 86 actgaagtgtttgggggaactc 107
>55067_zma-miR395b:pmrd
Length = 114
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 tgaagtgtttgggggaactc 113
||||||||||||||||||||
Sbjct: 76 tgaagtgtttgggggaactc 95
>55066_zma-miR395a:pmrd
Length = 149
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 tgaagtgtttgggggaactc 113
||||||||||||||||||||
Sbjct: 111 tgaagtgtttgggggaactc 130
>54482_sbi-miR395j:pmrd
Length = 87
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 tgaagtgtttgggggaactc 113
||||||||||||||||||||
Sbjct: 68 tgaagtgtttgggggaactc 87
>54481_sbi-miR395i:pmrd
Length = 97
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 tgaagtgtttgggggaactc 113
||||||||||||||||||||
Sbjct: 78 tgaagtgtttgggggaactc 97
>54480_sbi-miR395h:pmrd
Length = 81
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 tgaagtgtttgggggaactc 113
||||||||||||||||||||
Sbjct: 62 tgaagtgtttgggggaactc 81
>54479_sbi-miR395g:pmrd
Length = 68
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 tgaagtgtttgggggaactc 113
||||||||||||||||||||
Sbjct: 49 tgaagtgtttgggggaactc 68
>54478_sbi-miR395f:pmrd
Length = 122
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 tgaagtgtttgggggaactc 113
||||||||||||||||||||
Sbjct: 84 tgaagtgtttgggggaactc 103
>54477_sbi-miR395e:pmrd
Length = 105
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 tgaagtgtttgggggaactc 113
||||||||||||||||||||
Sbjct: 67 tgaagtgtttgggggaactc 86
>54476_sbi-miR395d:pmrd
Length = 104
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 tgaagtgtttgggggaactc 113
||||||||||||||||||||
Sbjct: 66 tgaagtgtttgggggaactc 85
>54475_sbi-miR395c:pmrd
Length = 208
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 tgaagtgtttgggggaactc 113
||||||||||||||||||||
Sbjct: 22 tgaagtgtttgggggaactc 41
>54474_sbi-miR395b:pmrd
Length = 105
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 tgaagtgtttgggggaactc 113
||||||||||||||||||||
Sbjct: 67 tgaagtgtttgggggaactc 86
>54473_sbi-miR395a:pmrd
Length = 150
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 tgaagtgtttgggggaactc 113
||||||||||||||||||||
Sbjct: 112 tgaagtgtttgggggaactc 131
>48940_osa-miR395s:pmrd
Length = 86
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 tgaagtgtttgggggaactc 113
||||||||||||||||||||
Sbjct: 57 tgaagtgtttgggggaactc 76
>48939_osa-miR395r:pmrd
Length = 68
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 tgaagtgtttgggggaactc 113
||||||||||||||||||||
Sbjct: 49 tgaagtgtttgggggaactc 68
>48938_osa-miR395q:pmrd
Length = 68
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 tgaagtgtttgggggaactc 113
||||||||||||||||||||
Sbjct: 49 tgaagtgtttgggggaactc 68
>48937_osa-miR395p:pmrd
Length = 68
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 tgaagtgtttgggggaactc 113
||||||||||||||||||||
Sbjct: 49 tgaagtgtttgggggaactc 68
>48935_osa-miR395n:pmrd
Length = 66
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 tgaagtgtttgggggaactc 113
||||||||||||||||||||
Sbjct: 47 tgaagtgtttgggggaactc 66
>48934_osa-miR395m:pmrd
Length = 120
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 tgaagtgtttgggggaactc 113
||||||||||||||||||||
Sbjct: 101 tgaagtgtttgggggaactc 120
>48933_osa-miR395l:pmrd
Length = 94
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 tgaagtgtttgggggaactc 113
||||||||||||||||||||
Sbjct: 75 tgaagtgtttgggggaactc 94
>48932_osa-miR395k:pmrd
Length = 99
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 tgaagtgtttgggggaactc 113
||||||||||||||||||||
Sbjct: 70 tgaagtgtttgggggaactc 89
>48931_osa-miR395j:pmrd
Length = 112
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 tgaagtgtttgggggaactc 113
||||||||||||||||||||
Sbjct: 83 tgaagtgtttgggggaactc 102
>48930_osa-miR395i:pmrd
Length = 99
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 tgaagtgtttgggggaactc 113
||||||||||||||||||||
Sbjct: 70 tgaagtgtttgggggaactc 89
>48929_osa-miR395h:pmrd
Length = 112
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 tgaagtgtttgggggaactc 113
||||||||||||||||||||
Sbjct: 83 tgaagtgtttgggggaactc 102
>48928_osa-miR395g:pmrd
Length = 86
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 tgaagtgtttgggggaactc 113
||||||||||||||||||||
Sbjct: 57 tgaagtgtttgggggaactc 76
>48926_osa-miR395e:pmrd
Length = 88
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 tgaagtgtttgggggaactc 113
||||||||||||||||||||
Sbjct: 59 tgaagtgtttgggggaactc 78
>48925_osa-miR395d:pmrd
Length = 88
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 tgaagtgtttgggggaactc 113
||||||||||||||||||||
Sbjct: 59 tgaagtgtttgggggaactc 78
>48923_osa-miR395b:pmrd
Length = 86
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 tgaagtgtttgggggaactc 113
||||||||||||||||||||
Sbjct: 57 tgaagtgtttgggggaactc 76
>48746_mtr-miR395o:pmrd
Length = 83
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 tgaagtgtttgggggaactc 113
||||||||||||||||||||
Sbjct: 64 tgaagtgtttgggggaactc 83
>48745_mtr-miR395n:pmrd
Length = 101
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 tgaagtgtttgggggaactc 113
||||||||||||||||||||
Sbjct: 82 tgaagtgtttgggggaactc 101
>48744_mtr-miR395m:pmrd
Length = 100
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 tgaagtgtttgggggaactc 113
||||||||||||||||||||
Sbjct: 81 tgaagtgtttgggggaactc 100
>48743_mtr-miR395l:pmrd
Length = 101
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 tgaagtgtttgggggaactc 113
||||||||||||||||||||
Sbjct: 82 tgaagtgtttgggggaactc 101
>48742_mtr-miR395k:pmrd
Length = 98
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 tgaagtgtttgggggaactc 113
||||||||||||||||||||
Sbjct: 79 tgaagtgtttgggggaactc 98
>48741_mtr-miR395j:pmrd
Length = 76
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 tgaagtgtttgggggaactc 113
||||||||||||||||||||
Sbjct: 57 tgaagtgtttgggggaactc 76
>48740_mtr-miR395i:pmrd
Length = 76
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 tgaagtgtttgggggaactc 113
||||||||||||||||||||
Sbjct: 57 tgaagtgtttgggggaactc 76
>48738_mtr-miR395g:pmrd
Length = 63
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 tgaagtgtttgggggaactc 113
||||||||||||||||||||
Sbjct: 44 tgaagtgtttgggggaactc 63
>48737_mtr-miR395f:pmrd
Length = 98
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 tgaagtgtttgggggaactc 113
||||||||||||||||||||
Sbjct: 79 tgaagtgtttgggggaactc 98
>48736_mtr-miR395e:pmrd
Length = 100
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 tgaagtgtttgggggaactc 113
||||||||||||||||||||
Sbjct: 81 tgaagtgtttgggggaactc 100
>48735_mtr-miR395d:pmrd
Length = 95
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 tgaagtgtttgggggaactc 113
||||||||||||||||||||
Sbjct: 76 tgaagtgtttgggggaactc 95
>48734_mtr-miR395c:pmrd
Length = 97
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 tgaagtgtttgggggaactc 113
||||||||||||||||||||
Sbjct: 78 tgaagtgtttgggggaactc 97
>48732_mtr-miR395a:pmrd
Length = 135
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 tgaagtgtttgggggaactc 113
||||||||||||||||||||
Sbjct: 97 tgaagtgtttgggggaactc 116
>48577_gma-miR395:pmrd
Length = 67
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 tgaagtgtttgggggaactc 113
||||||||||||||||||||
Sbjct: 48 tgaagtgtttgggggaactc 67
