miRNEST 2.0, an integrative microRNA resource :: BLAST
>51615_ptc-miR160h:pmrd
Length = 98
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgcatgcca 42
|||||||||||||||||||||||
Sbjct: 9 tgtgcctggctccctgcatgcca 31
>54940_zma-miR160c:pmrd
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgcatgccactc 45
|||||||||||||||| |||||||||
Sbjct: 5 tgtgcctggctccctgtatgccactc 30
>54780_vvi-miR160c:pmrd
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 80 tgcggctggcgtgtgaggagccaagcatac 109
||||| ||||||| ||||||||||||||||
Sbjct: 68 tgcgggtggcgtgcgaggagccaagcatac 97
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgcatgccactcgta 48
|||||||||||||||| ||||||| ||||
Sbjct: 9 tgtgcctggctccctgtatgccacacgta 37
>51361_ppt-miR160c:pmrd
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 23 gcctggctccctgcatgccact 44
||||||||||||||||||||||
Sbjct: 12 gcctggctccctgcatgccact 33
>48833_osa-miR160n:pmrd
Length = 131
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 78 actgcggctggcgtgtgaggagccaagcat 107
||||||| ||||||| ||||||||||||||
Sbjct: 102 actgcggatggcgtgcgaggagccaagcat 131
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgcatgccactcg 46
|||||||||||||| ||||||||||
Sbjct: 1 tgcctggctccctgtatgccactcg 25
>48829_osa-miR160d:pmrd
Length = 142
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 78 actgcggctggcgtgtgaggagccaagcat 107
||||||| ||||||| ||||||||||||||
Sbjct: 109 actgcggatggcgtgcgaggagccaagcat 138
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgcatgccactcg 46
|||||||||||||| ||||||||||
Sbjct: 8 tgcctggctccctgtatgccactcg 32
>48828_osa-miR160c:pmrd
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgcatgccactc 45
|||||||||||||||| |||||||||
Sbjct: 5 tgtgcctggctccctgtatgccactc 30
>54946_zma-miR160i:pmrd
Length = 81
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgcatgccactcg 46
|||||||||||||| ||||||||||
Sbjct: 2 tgcctggctccctgtatgccactcg 26
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 79 ctgcggctggcgtgtgaggagccaagcat 107
|||||||||||||| |||| |||||||||
Sbjct: 53 ctgcggctggcgtgcgaggtgccaagcat 81
>54942_zma-miR160e:pmrd
Length = 94
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgcatgccactcg 46
|||||||||||||| ||||||||||
Sbjct: 9 tgcctggctccctgtatgccactcg 33
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 79 ctgcggctggcgtgtgaggagccaagcat 107
|||||||||||||| |||| |||||||||
Sbjct: 59 ctgcggctggcgtgcgaggtgccaagcat 87
>54941_zma-miR160d:pmrd
Length = 142
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgcatgccactcg 46
|||||||||||||| ||||||||||
Sbjct: 21 tgcctggctccctgtatgccactcg 45
>54675_tae-miR160:pmrd
Length = 148
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgcatgccactcg 46
|||||||||||||| ||||||||||
Sbjct: 22 tgcctggctccctgtatgccactcg 46
>54408_sbi-miR160e:pmrd
Length = 95
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgcatgccactcg 46
|||||||||||||| ||||||||||
Sbjct: 1 tgcctggctccctgtatgccactcg 25
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 79 ctgcggctggcgtgtgaggagccaagca 106
|||||||||||||| |||| ||||||||
Sbjct: 68 ctgcggctggcgtgcgaggtgccaagca 95
>54407_sbi-miR160d:pmrd
Length = 100
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgcatgccactcg 46
|||||||||||||| ||||||||||
Sbjct: 1 tgcctggctccctgtatgccactcg 25
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 78 actgcggctggcgtgtgaggagccaagca 106
||||||| ||||||| |||||||||||||
Sbjct: 72 actgcggatggcgtgcgaggagccaagca 100
>48827_osa-miR160b:pmrd
Length = 139
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 21 gtgcctggctccctgcatgccactc 45
||||||||||||||| |||||||||
Sbjct: 29 gtgcctggctccctgtatgccactc 53
>48791_oba-miR160:pmrd
Length = 90
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgcatgccact 44
|||||||||||||||| ||||||||
Sbjct: 2 tgtgcctggctccctgtatgccact 26
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 81 gcggctggcgtgtgaggagccaagcatac 109
|||| ||||||| ||||||||||||||||
Sbjct: 62 gcgggtggcgtgcgaggagccaagcatac 90
>54939_zma-miR160b:pmrd
Length = 121
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgcatgccac 43
|||||||||||||||| |||||||
Sbjct: 19 tgtgcctggctccctgtatgccac 42
>54759_ttu-miR160a:pmrd
Length = 87
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgcatgccactc 45
|||||||||||||| |||||||||
Sbjct: 1 tgcctggctccctgtatgccactc 24
>54406_sbi-miR160c:pmrd
Length = 83
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgcatgccactc 45
|||||||||||||| |||||||||
Sbjct: 1 tgcctggctccctgtatgccactc 24
>53874_ptc-miRf12052-akr:pmrd
Length = 110
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 86 tggcgtgtgaggagccaagcatac 109
||||||| ||||||||||||||||
Sbjct: 76 tggcgtgcgaggagccaagcatac 99
>51611_ptc-miR160d:pmrd
Length = 103
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 86 tggcgtgtgaggagccaagcatac 109
||||||| ||||||||||||||||
Sbjct: 75 tggcgtgcgaggagccaagcatac 98
>51608_ptc-miR160a:pmrd
Length = 102
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 86 tggcgtgtgaggagccaagcatac 109
||||||| ||||||||||||||||
Sbjct: 74 tggcgtgcgaggagccaagcatac 97
>48832_osa-miR160m:pmrd
Length = 82
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgcatgccactc 45
|||||||||||||| |||||||||
Sbjct: 1 tgcctggctccctgtatgccactc 24
>48826_osa-miR160a:pmrd
Length = 88
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgcatgccac 43
|||||||||||||||| |||||||
Sbjct: 2 tgtgcctggctccctgtatgccac 25
