miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>54777_vvi-miR159c:pmrd
          Length = 190

 Score = 65.9 bits (33), Expect = 1e-11
 Identities = 67/77 (87%), Gaps = 1/77 (1%)
 Strand = Plus / Plus

                                                                      
Query: 11 gtggagctccttgaagtccaaaggagggtcttggttgggtggattgagctgctggtttat 70
          |||||||||||||||||||||  |||||||||   ||||| |||||||||||||  ||||
Sbjct: 8  gtggagctccttgaagtccaatagagggtctt-actgggtagattgagctgctgacttat 66

                           
Query: 71 ggattccactgccctat 87
          |||| |||| |||||||
Sbjct: 67 ggatcccacagccctat 83



 Score = 63.9 bits (32), Expect = 5e-11
 Identities = 69/80 (86%), Gaps = 1/80 (1%)
 Strand = Plus / Plus

                                                                       
Query: 136 ggataggcttgtggtttgcataactcaggagctgcatcaacccagcct-gacctttattt 194
           |||||||||||||| ||||||| |||||||||||||| | || ||  | || | || |||
Sbjct: 103 ggataggcttgtggcttgcatatctcaggagctgcattatccaagtttagatccttgttt 162

                               
Query: 195 ggattgaagggagctctaca 214
           ||||||||||||||||||||
Sbjct: 163 ggattgaagggagctctaca 182




>54674_tae-miR159b:pmrd
          Length = 255

 Score = 58.0 bits (29), Expect = 3e-09
 Identities = 71/85 (83%)
 Strand = Plus / Plus

                                                                       
Query: 133 ttgggataggcttgtggtttgcataactcaggagctgcatcaacccagcctgacctttat 192
           ||||||||||||| ||| ||||||  | ||||||||||||||||||  | ||  |  | |
Sbjct: 171 ttgggataggcttatggcttgcatgccccaggagctgcatcaaccctacatggaccctct 230

                                    
Query: 193 ttggattgaagggagctctacatct 217
           ||||||||||||||||||| |||||
Sbjct: 231 ttggattgaagggagctctgcatct 255




>48819_osa-miR159a:pmrd
          Length = 272

 Score = 58.0 bits (29), Expect = 3e-09
 Identities = 71/85 (83%)
 Strand = Plus / Plus

                                                                       
Query: 133 ttgggataggcttgtggtttgcataactcaggagctgcatcaacccagcctgacctttat 192
           ||||||||||||| ||| ||||||  | ||||||||||||||||||  | ||  |  | |
Sbjct: 183 ttgggataggcttatggcttgcatgccccaggagctgcatcaaccctacatggaccctct 242

                                    
Query: 193 ttggattgaagggagctctacatct 217
           ||||||||||||||||||| |||||
Sbjct: 243 ttggattgaagggagctctgcatct 267




>48796_oru-miR159:pmrd
          Length = 274

 Score = 58.0 bits (29), Expect = 3e-09
 Identities = 71/85 (83%)
 Strand = Plus / Plus

                                                                       
Query: 133 ttgggataggcttgtggtttgcataactcaggagctgcatcaacccagcctgacctttat 192
           ||||||||||||| ||| ||||||  | ||||||||||||||||||  | ||  |  | |
Sbjct: 183 ttgggataggcttatggcttgcatgccccaggagctgcatcaaccctacatggaccctct 242

                                    
Query: 193 ttggattgaagggagctctacatct 217
           ||||||||||||||||||| |||||
Sbjct: 243 ttggattgaagggagctctgcatct 267




>48825_osa-miR159m:pmrd
          Length = 249

 Score = 54.0 bits (27), Expect = 5e-08
 Identities = 66/79 (83%)
 Strand = Plus / Plus

                                                                       
Query: 133 ttgggataggcttgtggtttgcataactcaggagctgcatcaacccagcctgacctttat 192
           ||||||||||||| ||| ||||||  | ||||||||||||||||||  | ||  |  | |
Sbjct: 170 ttgggataggcttatggcttgcatgccccaggagctgcatcaaccctacatggaccctct 229

                              
Query: 193 ttggattgaagggagctct 211
           |||||||||||||||||||
Sbjct: 230 ttggattgaagggagctct 248




>48820_osa-miR159b:pmrd
          Length = 188

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 69/82 (84%), Gaps = 1/82 (1%)
 Strand = Plus / Plus

                                                                       
Query: 137 gataggcttgtggtttgcataactcaggagctgcatcaac-ccagcctgacctttatttg 195
           |||||||||||||||||||| ||  |||||| | |||||| ||   ||||||  | ||||
Sbjct: 102 gataggcttgtggtttgcatgaccaaggagccgaatcaactccttgctgaccactctttg 161

                                 
Query: 196 gattgaagggagctctacatct 217
           |||||||||||||||| |||||
Sbjct: 162 gattgaagggagctctgcatct 183




>48701_mtr-miR159c:pmrd
          Length = 44

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 192 tttggattgaagggagctctacatct 217
           ||||||||||||||||||||||||||
Sbjct: 1   tttggattgaagggagctctacatct 26




>54378_pvu-miR159:pmrd
          Length = 174

 Score = 50.1 bits (25), Expect = 7e-07
 Identities = 47/53 (88%), Gaps = 1/53 (1%)
 Strand = Plus / Plus

                                                               
Query: 11 gtggagctccttgaagtccaaaggagggtcttggttgggtggattgagctgct 63
          |||||||||||||||||||||  |||| ||||   ||||||||||||||||||
Sbjct: 1  gtggagctccttgaagtccaattgaggatctt-actgggtggattgagctgct 52



 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 192 tttggattgaagggagctctac 213
           ||||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctctac 174




>54377_pvu-miR159:pmrd
          Length = 174

 Score = 50.1 bits (25), Expect = 7e-07
 Identities = 47/53 (88%), Gaps = 1/53 (1%)
 Strand = Plus / Plus

                                                               
Query: 11 gtggagctccttgaagtccaaaggagggtcttggttgggtggattgagctgct 63
          |||||||||||||||||||||  |||| ||||   ||||||||||||||||||
Sbjct: 1  gtggagctccttgaagtccaattgaggatctt-actgggtggattgagctgct 52



 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 192 tttggattgaagggagctctac 213
           ||||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctctac 174




>48728_mtr-miR319b:pmrd
          Length = 42

 Score = 50.1 bits (25), Expect = 7e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 193 ttggattgaagggagctctacatct 217
           |||||||||||||||||||||||||
Sbjct: 1   ttggattgaagggagctctacatct 25




>54930_zma-miR159a:pmrd
          Length = 246

 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 132 tttgggataggcttgtggtttgcataactcaggagctgca 171
           |||| |||||||||||||||||||| ||  ||||||||||
Sbjct: 146 tttgagataggcttgtggtttgcatgaccgaggagctgca 185



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 192 tttggattgaagggagctctacatc 216
           |||||||||||||||||||| ||||
Sbjct: 207 tttggattgaagggagctctgcatc 231




>54629_sof-miR159b:pmrd
          Length = 266

 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 132 tttgggataggcttgtggtttgcataactcaggagctgca 171
           |||| |||||||||||||||||||| ||  ||||||||||
Sbjct: 166 tttgagataggcttgtggtttgcatgaccgaggagctgca 205



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 192 tttggattgaagggagctctacatc 216
           |||||||||||||||||||| ||||
Sbjct: 227 tttggattgaagggagctctgcatc 251




>54628_sof-miR159a:pmrd
          Length = 265

 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 132 tttgggataggcttgtggtttgcataactcaggagctgca 171
           |||| |||||||||||||||||||| ||  ||||||||||
Sbjct: 165 tttgagataggcttgtggtttgcatgaccgaggagctgca 204



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 192 tttggattgaagggagctctacatc 216
           |||||||||||||||||||| ||||
Sbjct: 226 tttggattgaagggagctctgcatc 250




>48686_ltu-miR159:pmrd
          Length = 345

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 192 tttggattgaagggagctctaca 214
           |||||||||||||||||||||||
Sbjct: 1   tttggattgaagggagctctaca 23




>48539_gma-miR159a:pmrd
          Length = 214

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 192 tttggattgaagggagctctaca 214
           |||||||||||||||||||||||
Sbjct: 175 tttggattgaagggagctctaca 197



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 gtggagctccttgaagtccaa 31
          |||||||||||||||||||||
Sbjct: 20 gtggagctccttgaagtccaa 40




>48395_bra-miR159a:pmrd
          Length = 185

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 192 tttggattgaagggagctctaca 214
           |||||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctctaca 185




>48339_bna-miR159:pmrd
          Length = 183

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 192 tttggattgaagggagctctaca 214
           |||||||||||||||||||||||
Sbjct: 161 tttggattgaagggagctctaca 183




>54931_zma-miR159b:pmrd
          Length = 221

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 192 tttggattgaagggagctctacatct 217
           |||||||||||||||||||| |||||
Sbjct: 182 tttggattgaagggagctctgcatct 207




>51603_ptc-miR159b:pmrd
          Length = 187

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 187 ctttatttggattgaagggagctcta 212
           |||| |||||||||||||||||||||
Sbjct: 153 ctttttttggattgaagggagctcta 178



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 gtggagctccttgaagtccaa 31
          |||||||||||||||||||||
Sbjct: 10 gtggagctccttgaagtccaa 30




>48824_osa-miR159f:pmrd
          Length = 188

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 193 ttggattgaagggagctctaca 214
           ||||||||||||||||||||||
Sbjct: 159 ttggattgaagggagctctaca 180




>48699_mtr-miR159a:pmrd
          Length = 168

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 187 ctttatttggattgaagggagctcta 212
           |||| |||||||||||||||||||||
Sbjct: 143 ctttctttggattgaagggagctcta 168




>48656_hvv-miR159a:pmrd
          Length = 303

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 192 tttggattgaagggagctctacatct 217
           |||||||||||||||||||| |||||
Sbjct: 1   tttggattgaagggagctctgcatct 26




>46932_ath-miR159b:pmrd
          Length = 196

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 192 tttggattgaagggagctctacatct 217
           |||||||||||||||||||| |||||
Sbjct: 168 tttggattgaagggagctcttcatct 193




>46931_ath-miR159a:pmrd
          Length = 184

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 192 tttggattgaagggagctctac 213
           ||||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctctac 184




>54937_zma-miR159m:pmrd
          Length = 457

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 192 tttggattgaagggagctctacatc 216
           |||||||||||||||||||| ||||
Sbjct: 1   tttggattgaagggagctctgcatc 25




>54653_spr-miR159:pmrd
          Length = 392

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 192 tttggattgaagggagctctacatc 216
           |||||||||||||||||||| ||||
Sbjct: 1   tttggattgaagggagctctgcatc 25




>54632_sof-miR159e:pmrd
          Length = 264

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 132 tttgggataggcttgtggtttgcat 156
           |||| ||||||||||||||||||||
Sbjct: 164 tttgagataggcttgtggtttgcat 188




>54631_sof-miR159d:pmrd
          Length = 265

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 192 tttggattgaagggagctctacatc 216
           |||||||||||||||||||| ||||
Sbjct: 226 tttggattgaagggagctctgcatc 250




>54540_sly-miR159:pmrd
          Length = 177

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 192 tttggattgaagggagctcta 212
           |||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctcta 177



 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 12 tggagctccttgaagtccaa 31
          ||||||||||||||||||||
Sbjct: 1  tggagctccttgaagtccaa 20




>52093_ptc-miRf10271-akr:pmrd
          Length = 174

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 gtggagctccttgaagtccaa 31
          |||||||||||||||||||||
Sbjct: 5  gtggagctccttgaagtccaa 25



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 192 tttggattgaagggagctcta 212
           |||||||||||||||||||||
Sbjct: 149 tttggattgaagggagctcta 169




>51604_ptc-miR159c:pmrd
          Length = 183

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 gtggagctccttgaagtccaa 31
          |||||||||||||||||||||
Sbjct: 10 gtggagctccttgaagtccaa 30



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 192 tttggattgaagggagctcta 212
           |||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174




>51602_ptc-miR159a:pmrd
          Length = 183

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 gtggagctccttgaagtccaa 31
          |||||||||||||||||||||
Sbjct: 10 gtggagctccttgaagtccaa 30



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 192 tttggattgaagggagctcta 212
           |||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174




>48821_osa-miR159c:pmrd
          Length = 197

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 193 ttggattgaagggagctctacatct 217
           |||||||||||||||||| ||||||
Sbjct: 168 ttggattgaagggagctccacatct 192