miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>54411_sbi-miR164b:pmrd
Length = 111
Score = 67.9 bits (34), Expect = 3e-12
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 144 tcgcagcacgtgcgctccttctccatcatggattctcgcccc 185
||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 68 tcgcagcacgtgcgctccttctccaacatggcttctcgcccc 109
Score = 60.0 bits (30), Expect = 8e-10
Identities = 40/42 (95%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 60 gaggggcgagcaaacccctgctggagaagcagggcacgtgct 101
|||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 gaggggcgagcaaaccg-tgctggagaagcagggcacgtgct 41
>48841_osa-miR164d:pmrd
Length = 94
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 78 tgctggagaagcagggcacgtgct 101
||||||||||||||||||||||||
Sbjct: 8 tgctggagaagcagggcacgtgct 31
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 146 gcagcacgtgcgctccttctccatcatgg 174
|||||| |||||||||||||||| |||||
Sbjct: 62 gcagcatgtgcgctccttctccagcatgg 90
>51862_ptc-miRf10040-akr:pmrd
Length = 91
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 78 tgctggagaagcagggcacgtgc 100
|||||||||||||||||||||||
Sbjct: 80 tgctggagaagcagggcacgtgc 58
>51621_ptc-miR164c:pmrd
Length = 82
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 78 tgctggagaagcagggcacgtgc 100
|||||||||||||||||||||||
Sbjct: 8 tgctggagaagcagggcacgtgc 30
>51619_ptc-miR164a:pmrd
Length = 85
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 78 tgctggagaagcagggcacgtgc 100
|||||||||||||||||||||||
Sbjct: 8 tgctggagaagcagggcacgtgc 30
>54952_zma-miR164d:pmrd
Length = 216
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 79 gctggagaagcagggcacgtgc 100
||||||||||||||||||||||
Sbjct: 18 gctggagaagcagggcacgtgc 39
>54949_zma-miR164a:pmrd
Length = 152
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 79 gctggagaagcagggcacgtgc 100
||||||||||||||||||||||
Sbjct: 17 gctggagaagcagggcacgtgc 38
>51622_ptc-miR164d:pmrd
Length = 99
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 79 gctggagaagcagggcacgtgc 100
||||||||||||||||||||||
Sbjct: 9 gctggagaagcagggcacgtgc 30
>54956_zma-miR164h:pmrd
Length = 96
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 tggagaagcagggcacgtgc 100
||||||||||||||||||||
Sbjct: 4 tggagaagcagggcacgtgc 23
>54955_zma-miR164g:pmrd
Length = 116
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 tggagaagcagggcacgtgc 100
||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgc 20
>54954_zma-miR164f:pmrd
Length = 177
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 tggagaagcagggcacgtgc 100
||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgc 20
>54953_zma-miR164e:pmrd
Length = 242
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 tggagaagcagggcacgtgc 100
||||||||||||||||||||
Sbjct: 4 tggagaagcagggcacgtgc 23
>54951_zma-miR164c:pmrd
Length = 270
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 tggagaagcagggcacgtgc 100
||||||||||||||||||||
Sbjct: 18 tggagaagcagggcacgtgc 37
>54950_zma-miR164b:pmrd
Length = 128
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 tggagaagcagggcacgtgc 100
||||||||||||||||||||
Sbjct: 21 tggagaagcagggcacgtgc 40
>54788_vvi-miR164d:pmrd
Length = 118
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 tggagaagcagggcacgtgc 100
||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgc 30
>54787_vvi-miR164c:pmrd
Length = 97
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 tggagaagcagggcacgtgc 100
||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgc 30
>54786_vvi-miR164b:pmrd
Length = 93
Score = 40.1 bits (20), Expect = 8e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 78 tgctggagaagcagggcacgtgct 101
||||||||||||||||||| ||||
Sbjct: 8 tgctggagaagcagggcacatgct 31
>54785_vvi-miR164a:pmrd
Length = 121
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 tggagaagcagggcacgtgc 100
||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgc 30
>54676_tae-miR164b:pmrd
Length = 152
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 tggagaagcagggcacgtgc 100
||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgc 20
>54414_sbi-miR164e:pmrd
Length = 205
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 tggagaagcagggcacgtgc 100
||||||||||||||||||||
Sbjct: 3 tggagaagcagggcacgtgc 22
>54413_sbi-miR164d:pmrd
Length = 160
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 tggagaagcagggcacgtgc 100
||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgc 20
>54410_sbi-miR164:pmrd
Length = 126
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 tggagaagcagggcacgtgc 100
||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgc 20
>53142_ptc-miRf11320-akr:pmrd
Length = 167
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 tggagaagcagggcacgtgc 100
||||||||||||||||||||
Sbjct: 15 tggagaagcagggcacgtgc 34
>52901_ptc-miRf11079-akr:pmrd
Length = 171
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 tggagaagcagggcacgtgc 100
||||||||||||||||||||
Sbjct: 15 tggagaagcagggcacgtgc 34
>51624_ptc-miR164f:pmrd
Length = 90
Score = 40.1 bits (20), Expect = 8e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 78 tgctggagaagcagggcacgtgct 101
||||||||||||||||||| ||||
Sbjct: 8 tgctggagaagcagggcacatgct 31
>51623_ptc-miR164e:pmrd
Length = 155
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 tggagaagcagggcacgtgc 100
||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgc 30
>51620_ptc-miR164b:pmrd
Length = 162
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 tggagaagcagggcacgtgc 100
||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgc 30
>51348_ppl-miR164:pmrd
Length = 159
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 tggagaagcagggcacgtgc 100
||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgc 30
>50414_osa-miRf11199-akr:pmrd
Length = 146
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 tggagaagcagggcacgtgc 100
||||||||||||||||||||
Sbjct: 13 tggagaagcagggcacgtgc 32
>48843_osa-miR164f:pmrd
Length = 210
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 tggagaagcagggcacgtgc 100
||||||||||||||||||||
Sbjct: 24 tggagaagcagggcacgtgc 43
>48839_osa-miR164b:pmrd
Length = 109
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 tggagaagcagggcacgtgc 100
||||||||||||||||||||
Sbjct: 9 tggagaagcagggcacgtgc 28
>48838_osa-miR164a:pmrd
Length = 156
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 tggagaagcagggcacgtgc 100
||||||||||||||||||||
Sbjct: 17 tggagaagcagggcacgtgc 36
>48710_mtr-miR164c:pmrd
Length = 86
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 tggagaagcagggcacgtgc 100
||||||||||||||||||||
Sbjct: 6 tggagaagcagggcacgtgc 25
>48709_mtr-miR164b:pmrd
Length = 144
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 tggagaagcagggcacgtgc 100
||||||||||||||||||||
Sbjct: 6 tggagaagcagggcacgtgc 25
>48708_mtr-miR164a:pmrd
Length = 99
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 tggagaagcagggcacgtgc 100
||||||||||||||||||||
Sbjct: 6 tggagaagcagggcacgtgc 25
>48547_gma-miR164:pmrd
Length = 95
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 tggagaagcagggcacgtgc 100
||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgc 30
>48473_csi-miR164:pmrd
Length = 168
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 tggagaagcagggcacgtgc 100
||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgc 20
>48419_cav-miR164:pmrd
Length = 95
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 tggagaagcagggcacgtgc 100
||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgc 30
>48398_bra-miR164a:pmrd
Length = 92
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 tggagaagcagggcacgtgc 100
||||||||||||||||||||
Sbjct: 10 tggagaagcagggcacgtgc 29
>48341_bna-miR164:pmrd
Length = 86
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 tggagaagcagggcacgtgc 100
||||||||||||||||||||
Sbjct: 7 tggagaagcagggcacgtgc 26
>47540_ath-miRf10440-akr:pmrd
Length = 113
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 81 tggagaagcagggcacgtgc 100
||||||||||||||||||||
Sbjct: 95 tggagaagcagggcacgtgc 76
>47539_ath-miRf10439-akr:pmrd
Length = 115
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 81 tggagaagcagggcacgtgc 100
||||||||||||||||||||
Sbjct: 96 tggagaagcagggcacgtgc 77
>47347_ath-miRf10247-akr:pmrd
Length = 159
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 tggagaagcagggcacgtgc 100
||||||||||||||||||||
Sbjct: 6 tggagaagcagggcacgtgc 25
>46942_ath-miR164c:pmrd
Length = 102
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 tggagaagcagggcacgtgc 100
||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgc 30
>46941_ath-miR164b:pmrd
Length = 153
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 tggagaagcagggcacgtgc 100
||||||||||||||||||||
Sbjct: 3 tggagaagcagggcacgtgc 22
>46940_ath-miR164a:pmrd
Length = 113
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 tggagaagcagggcacgtgc 100
||||||||||||||||||||
Sbjct: 19 tggagaagcagggcacgtgc 38
