miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>49004_osa-miR442:pmrd
          Length = 233

 Score =  180 bits (91), Expect = 2e-46
 Identities = 114/122 (93%)
 Strand = Plus / Minus

                                                                       
Query: 24  ctgtaaactgcgagacgagttcattaagcctaattaattcgtcattagcaaatgtttact 83
           |||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||
Sbjct: 178 ctgtaaactgcgagacgaatttattaagcctaattaatccgtcattagcaaatgtttact 119

                                                                       
Query: 84  gtagcaccacattgtcaaatcacggcgcnattaggctcaaaagattcgtctcgcaattta 143
           ||||||||||||||||| |||| || || |||||||| ||||||||||||||||||||||
Sbjct: 118 gtagcaccacattgtcagatcatggagcaattaggcttaaaagattcgtctcgcaattta 59

             
Query: 144 ca 145
           ||
Sbjct: 58  ca 57




>50895_osa-miRf11680-akr:pmrd
          Length = 145

 Score =  153 bits (77), Expect = 5e-38
 Identities = 115/128 (89%)
 Strand = Plus / Minus

                                                                       
Query: 23  cctgtaaactgcgagacgagttcattaagcctaattaattcgtcattagcaaatgtttac 82
           ||||||||| ||||||||| || |||||||||||||||| | ||||||||||||||||||
Sbjct: 134 cctgtaaaccgcgagacgaatttattaagcctaattaatccatcattagcaaatgtttac 75

                                                                       
Query: 83  tgtagcaccacattgtcaaatcacggcgcnattaggctcaaaagattcgtctcgcaattt 142
           | ||||||||||||||||||| | || || |||||||| ||||||| |||||||||||||
Sbjct: 74  tttagcaccacattgtcaaattatggtgcaattaggcttaaaagatccgtctcgcaattt 15

                   
Query: 143 acatgcaa 150
           ||| ||||
Sbjct: 14  acacgcaa 7




>50149_osa-miRf10934-akr:pmrd
          Length = 143

 Score =  101 bits (51), Expect = 2e-22
 Identities = 83/94 (88%)
 Strand = Plus / Minus

                                                                       
Query: 49  aagcctaattaattcgtcattagcaaatgtttactgtagcaccacattgtcaaatcacgg 108
           ||||||||||||| ||||||||||||||||||| |||| ||| ||||||| |||| | ||
Sbjct: 107 aagcctaattaatccgtcattagcaaatgtttattgtaccacaacattgttaaattatgg 48

                                             
Query: 109 cgcnattaggctcaaaagattcgtctcgcaattt 142
           ||| |||||||  |||||||||||||||| ||||
Sbjct: 47  cgcaattaggcctaaaagattcgtctcgcgattt 14




>49008_osa-miR445a:pmrd
          Length = 268

 Score = 95.6 bits (48), Expect = 1e-20
 Identities = 92/107 (85%)
 Strand = Plus / Plus

                                                                       
Query: 31  ctgcgagacgagttcattaagcctaattaattcgtcattagcaaatgtttactgtagcac 90
           ||||||||||| ||  ||||||||||||||| | | ||||  ||| ||||||||||||| 
Sbjct: 80  ctgcgagacgaattttttaagcctaattaatccataattatgaaaagtttactgtagcat 139

                                                          
Query: 91  cacattgtcaaatcacggcgcnattaggctcaaaagattcgtctcgc 137
           ||||||||||||||| || |  ||||| |||||||||||||||||||
Sbjct: 140 cacattgtcaaatcatggtgtaattagactcaaaagattcgtctcgc 186




>50516_osa-miRf11301-akr:pmrd
          Length = 139

 Score = 69.9 bits (35), Expect = 6e-13
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                      
Query: 113 attaggctcaaaagattcgtctcgcaatttacatgcaaactgt 155
           ||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 45  attaggctcaaaagattcgtctcgcgatttccatgcaaactgt 87




>51000_osa-miRf11785-akr:pmrd
          Length = 128

 Score = 56.0 bits (28), Expect = 9e-09
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                               
Query: 113 attaggctcaaaagattcgtctcgcaatttacatgc 148
           ||||||||||||||||| ||||||| ||||||||||
Sbjct: 93  attaggctcaaaagatttgtctcgcgatttacatgc 128



 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 113 attaggctcaaaagattcgtctcgc 137
           |||||||||||||||||||||||||
Sbjct: 36  attaggctcaaaagattcgtctcgc 12




>51304_osa-miRf12089-akr:pmrd
          Length = 120

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 50 agcctaattaattcgtcattagcaaatgt 78
          |||||||||||||||||||||||| ||||
Sbjct: 25 agcctaattaattcgtcattagcacatgt 53



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 113 attaggctcaaaagattcgtct 134
           ||||||||||||||||||||||
Sbjct: 32  attaggctcaaaagattcgtct 11



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 113 attaggctcaaaagattcgtctcgcaattt 142
           ||||| ||||||||||||||||||| ||||
Sbjct: 89  attagactcaaaagattcgtctcgcgattt 118




>50021_osa-miRf10806-akr:pmrd
          Length = 123

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 113 attaggctcaaaagattcgtctcgc 137
           |||||||||||||||||||||||||
Sbjct: 32  attaggctcaaaagattcgtctcgc 8



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 39/44 (88%), Gaps = 3/44 (6%)
 Strand = Plus / Plus

                                                      
Query: 50 agcctaattaattcgtcattagcaaatgt---ttactgtagcac 90
          |||||||||||| ||||||||||| ||||   ||||||||||||
Sbjct: 25 agcctaattaatccgtcattagcacatgtggattactgtagcac 68



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 113 attaggctcaaaagattcgtctcgcaattt 142
           |||||||| |||||||||||||||| ||||
Sbjct: 92  attaggcttaaaagattcgtctcgcgattt 121




>49733_osa-miRf10518-akr:pmrd
          Length = 122

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 113 attaggctcaaaagattcgtctcgc 137
           |||||||||||||||||||||||||
Sbjct: 33  attaggctcaaaagattcgtctcgc 9



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 113 attaggctcaaaagattcgtctcg 136
           ||||||||||||||||||||||||
Sbjct: 90  attaggctcaaaagattcgtctcg 113




>49455_osa-miRf10240-akr:pmrd
          Length = 128

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 113 attaggctcaaaagattcgtctcgc 137
           |||||||||||||||||||||||||
Sbjct: 93  attaggctcaaaagattcgtctcgc 117



 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 113 attaggctcaaaagattcgtctc 135
           |||||||||||||||||||||||
Sbjct: 36  attaggctcaaaagattcgtctc 14




>51249_osa-miRf12034-akr:pmrd
          Length = 121

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 113 attaggctcaaaagattcgtct 134
           ||||||||||||||||||||||
Sbjct: 33  attaggctcaaaagattcgtct 12



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 50 agcctaattaattcgtcattagca 73
          |||||||||||| |||||||||||
Sbjct: 97 agcctaattaatccgtcattagca 74




>49652_osa-miRf10437-akr:pmrd
          Length = 120

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 113 attaggctcaaaagattcgtctcgcaattt 142
           ||||||||||||||||| ||||||| ||||
Sbjct: 32  attaggctcaaaagatttgtctcgcgattt 3



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 113 attaggctcaaaagattcgtctcgc 137
           |||| ||||||||||||||||||||
Sbjct: 89  attatgctcaaaagattcgtctcgc 113




>49015_osa-miR445h:pmrd
          Length = 277

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 113 attaggctcaaaagattcgtctcgc 137
           ||||| |||||||||||||||||||
Sbjct: 158 attagactcaaaagattcgtctcgc 182




>49013_osa-miR445f:pmrd
          Length = 305

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 113 attaggctcaaaagattcgtctcgc 137
           ||||| |||||||||||||||||||
Sbjct: 173 attagactcaaaagattcgtctcgc 197




>49012_osa-miR445e:pmrd
          Length = 265

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 113 attaggctcaaaagattcgtctcgc 137
           ||||| |||||||||||||||||||
Sbjct: 152 attagactcaaaagattcgtctcgc 176




>49011_osa-miR445d:pmrd
          Length = 312

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                            
Query: 47  ttaagcctaattaattcgtcattagcaaatgtttactgtagcaccacat 95
           ||||||||||||||| | | |||| || ||||||| ||||||| |||||
Sbjct: 193 ttaagcctaattaatccataattaacacatgtttagtgtagcatcacat 145




>49009_osa-miR445b:pmrd
          Length = 264

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 113 attaggctcaaaagattcgtctcgc 137
           ||||| |||||||||||||||||||
Sbjct: 151 attagactcaaaagattcgtctcgc 175




>49010_osa-miR445c:pmrd
          Length = 260

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 113 attaggctcaaaagattcgtctcg 136
           |||||||| |||||||||||||||
Sbjct: 150 attaggcttaaaagattcgtctcg 173