miRNEST 2.0, an integrative microRNA resource :: BLAST
>51872_ptc-miRf10050-akr:pmrd
Length = 138
Score = 274 bits (138), Expect = 2e-74
Identities = 138/138 (100%)
Strand = Plus / Plus
Query: 3 gttataacatcttgatcaatggccattgtaagagtagaaggatccatgaagcaataactc 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttataacatcttgatcaatggccattgtaagagtagaaggatccatgaagcaataactc 60
Query: 63 tctttgctaaaatgtgtgataaaacattgactcctggtatttcactcttacagtgcccat 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tctttgctaaaatgtgtgataaaacattgactcctggtatttcactcttacagtgcccat 120
Query: 123 tgattaagatggtataat 140
||||||||||||||||||
Sbjct: 121 tgattaagatggtataat 138
>51871_ptc-miRf10049-akr:pmrd
Length = 138
Score = 274 bits (138), Expect = 2e-74
Identities = 138/138 (100%)
Strand = Plus / Plus
Query: 3 gttataacatcttgatcaatggccattgtaagagtagaaggatccatgaagcaataactc 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttataacatcttgatcaatggccattgtaagagtagaaggatccatgaagcaataactc 60
Query: 63 tctttgctaaaatgtgtgataaaacattgactcctggtatttcactcttacagtgcccat 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tctttgctaaaatgtgtgataaaacattgactcctggtatttcactcttacagtgcccat 120
Query: 123 tgattaagatggtataat 140
||||||||||||||||||
Sbjct: 121 tgattaagatggtataat 138
>52769_ptc-miRf10947-akr:pmrd
Length = 124
Score = 246 bits (124), Expect = 4e-66
Identities = 124/124 (100%)
Strand = Plus / Plus
Query: 10 catcttgatcaatggccattgtaagagtagaaggatccatgaagcaataactctctttgc 69
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 catcttgatcaatggccattgtaagagtagaaggatccatgaagcaataactctctttgc 60
Query: 70 taaaatgtgtgataaaacattgactcctggtatttcactcttacagtgcccattgattaa 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taaaatgtgtgataaaacattgactcctggtatttcactcttacagtgcccattgattaa 120
Query: 130 gatg 133
||||
Sbjct: 121 gatg 124
>51870_ptc-miRf10048-akr:pmrd
Length = 124
Score = 246 bits (124), Expect = 4e-66
Identities = 124/124 (100%)
Strand = Plus / Plus
Query: 10 catcttgatcaatggccattgtaagagtagaaggatccatgaagcaataactctctttgc 69
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 catcttgatcaatggccattgtaagagtagaaggatccatgaagcaataactctctttgc 60
Query: 70 taaaatgtgtgataaaacattgactcctggtatttcactcttacagtgcccattgattaa 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taaaatgtgtgataaaacattgactcctggtatttcactcttacagtgcccattgattaa 120
Query: 130 gatg 133
||||
Sbjct: 121 gatg 124
>51770_ptc-miR475a:pmrd
Length = 124
Score = 246 bits (124), Expect = 4e-66
Identities = 124/124 (100%)
Strand = Plus / Plus
Query: 10 catcttgatcaatggccattgtaagagtagaaggatccatgaagcaataactctctttgc 69
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 catcttgatcaatggccattgtaagagtagaaggatccatgaagcaataactctctttgc 60
Query: 70 taaaatgtgtgataaaacattgactcctggtatttcactcttacagtgcccattgattaa 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taaaatgtgtgataaaacattgactcctggtatttcactcttacagtgcccattgattaa 120
Query: 130 gatg 133
||||
Sbjct: 121 gatg 124
>53811_ptc-miRf11989-akr:pmrd
Length = 128
Score = 167 bits (84), Expect = 3e-42
Identities = 117/127 (92%), Gaps = 2/127 (1%)
Strand = Plus / Plus
Query: 7 taacatcttgatcaatggccattgtaagagtagaaggatccatgaagcaataactctctt 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taacatcttgatcaatggccattgtaagagtagaaggatccatgaagcaataactctctt 60
Query: 67 tgctaaaatgtgtgataaaacattgactcctggtatttcactcttacagtgcccattgat 126
|||| ||||||| || || || ||||| || ||||||| |||||||||||||||||||
Sbjct: 61 tgctgaaatgtgcgaccaa--atagactcttgatatttcattcttacagtgcccattgat 118
Query: 127 taagatg 133
|||||||
Sbjct: 119 taagatg 125
>52353_ptc-miRf10531-akr:pmrd
Length = 128
Score = 167 bits (84), Expect = 3e-42
Identities = 117/127 (92%), Gaps = 2/127 (1%)
Strand = Plus / Plus
Query: 7 taacatcttgatcaatggccattgtaagagtagaaggatccatgaagcaataactctctt 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taacatcttgatcaatggccattgtaagagtagaaggatccatgaagcaataactctctt 60
Query: 67 tgctaaaatgtgtgataaaacattgactcctggtatttcactcttacagtgcccattgat 126
|||| ||||||| || || || ||||| || ||||||| |||||||||||||||||||
Sbjct: 61 tgctgaaatgtgcgaccaa--atagactcttgatatttcattcttacagtgcccattgat 118
Query: 127 taagatg 133
|||||||
Sbjct: 119 taagatg 125
>51771_ptc-miR475b:pmrd
Length = 120
Score = 157 bits (79), Expect = 3e-39
Identities = 112/122 (91%), Gaps = 2/122 (1%)
Strand = Plus / Plus
Query: 11 atcttgatcaatggccattgtaagagtagaaggatccatgaagcaataactctctttgct 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atcttgatcaatggccattgtaagagtagaaggatccatgaagcaataactctctttgct 60
Query: 71 aaaatgtgtgataaaacattgactcctggtatttcactcttacagtgcccattgattaag 130
||||||| || || || ||||| || ||||||| |||||||||||||||||||||||
Sbjct: 61 gaaatgtgcgaccaa--atagactcttgatatttcattcttacagtgcccattgattaag 118
Query: 131 at 132
||
Sbjct: 119 at 120
>51773_ptc-miR475d:pmrd
Length = 103
Score = 93.7 bits (47), Expect = 3e-20
Identities = 50/51 (98%)
Strand = Plus / Plus
Query: 6 ataacatcttgatcaatggccattgtaagagtagaaggatccatgaagcaa 56
|||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ataacatcctgatcaatggccattgtaagagtagaaggatccatgaagcaa 51
Score = 69.9 bits (35), Expect = 5e-13
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 83 aaaacattgactcctggtatttcactcttacagtgcccattgattaagatg 133
|||||||||||||||| |||| ||||||||||| | |||||||||||||||
Sbjct: 50 aaaacattgactcctgatattccactcttacagagtccattgattaagatg 100
>53810_ptc-miRf11988-akr:pmrd
Length = 102
Score = 91.7 bits (46), Expect = 1e-19
Identities = 49/50 (98%)
Strand = Plus / Plus
Query: 7 taacatcttgatcaatggccattgtaagagtagaaggatccatgaagcaa 56
||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taacatcctgatcaatggccattgtaagagtagaaggatccatgaagcaa 50
Score = 69.9 bits (35), Expect = 5e-13
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 83 aaaacattgactcctggtatttcactcttacagtgcccattgattaagatg 133
|||||||||||||||| |||| ||||||||||| | |||||||||||||||
Sbjct: 49 aaaacattgactcctgatattccactcttacagagtccattgattaagatg 99
>51772_ptc-miR475c:pmrd
Length = 125
Score = 85.7 bits (43), Expect = 8e-18
Identities = 106/125 (84%), Gaps = 4/125 (3%)
Strand = Plus / Plus
Query: 7 taacatcttgatcaatggccattgtaagagtagaaggatccatgaagcaataactctctt 66
||||||||||| |||||||||||||||||||| | | ||||||| |||||||||||||
Sbjct: 1 taacatcttgaacaatggccattgtaagagta-agtggtccatgagtcaataactctctt 59
Query: 67 tgctaaaatgtgtgataaaacattgactcctggtatttcactcttacagtgcccattgat 126
||| ||||| ||| ||| |||||||||| |||||||| |||||| || ||||||||
Sbjct: 60 tgcagaaatgcatgacaaagcattgactcc---tatttcacccttacaatgtccattgat 116
Query: 127 taaga 131
|||||
Sbjct: 117 taaga 121
