miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>54695_tae-miR1120:pmrd
          Length = 119

 Score = 65.9 bits (33), Expect = 4e-12
 Identities = 65/75 (86%), Gaps = 3/75 (4%)
 Strand = Plus / Minus

                                                                      
Query: 7  tccgtcccataatataaaagtgtttttcacactacactagtgacaaaaacgctcttatat 66
          |||||| |||||||||| | ||||||| ||||||||||   | |||||| | ||||||||
Sbjct: 92 tccgtctcataatataagaatgtttttgacactacact---gtcaaaaatgttcttatat 36

                         
Query: 67 tatgggacggaggga 81
          |||||||||||||||
Sbjct: 35 tatgggacggaggga 21



 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                
Query: 44 tagtgacaaaaacgctcttatattatgggacggaggga 81
          ||||| |||||||  |||||||||||| ||||||||||
Sbjct: 59 tagtgtcaaaaacattcttatattatgagacggaggga 96




>51255_osa-miRf12040-akr:pmrd
          Length = 102

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 60 cttatattatgggacggaggga 81
          ||||||||||||||||||||||
Sbjct: 33 cttatattatgggacggaggga 12




>51254_osa-miRf12039-akr:pmrd
          Length = 102

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 60 cttatattatgggacggaggga 81
          ||||||||||||||||||||||
Sbjct: 33 cttatattatgggacggaggga 12




>51250_osa-miRf12035-akr:pmrd
          Length = 119

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 60 cttatattatgggacggaggga 81
          ||||||||||||||||||||||
Sbjct: 34 cttatattatgggacggaggga 13



 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 60  cttatattatgggacggaggga 81
           ||||||||||||||||||||||
Sbjct: 89  cttatattatgggacggaggga 110




>50738_osa-miRf11523-akr:pmrd
          Length = 108

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 60 cttatattatgggacggaggga 81
          ||||||||||||||||||||||
Sbjct: 73 cttatattatgggacggaggga 94




>50587_osa-miRf11372-akr:pmrd
          Length = 126

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 60 cttatattatgggacggaggga 81
          ||||||||||||||||||||||
Sbjct: 31 cttatattatgggacggaggga 10



 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 60  cttatattatgggacggaggga 81
           ||||||||||||||||||||||
Sbjct: 97  cttatattatgggacggaggga 118




>49070_osa-miR818d:pmrd
          Length = 139

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 60  cttatattatgggacggaggga 81
           ||||||||||||||||||||||
Sbjct: 103 cttatattatgggacggaggga 124




>49068_osa-miR818b:pmrd
          Length = 113

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 58 ctcttatattatgggacggagg 79
          ||||||||||||||||||||||
Sbjct: 22 ctcttatattatgggacggagg 1



 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 60  cttatattatgggacggagg 79
           ||||||||||||||||||||
Sbjct: 94  cttatattatgggacggagg 113




>49126_osa-miR1442:pmrd
          Length = 185

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 4   ccatccgtcccataatataa 23
           ||||||||||||||||||||
Sbjct: 121 ccatccgtcccataatataa 140




>49071_osa-miR818e:pmrd
          Length = 225

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 60  cttatattatgggacggagg 79
           ||||||||||||||||||||
Sbjct: 206 cttatattatgggacggagg 225




>49120_osa-miR1436:pmrd
          Length = 161

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 63 atattatgggacggaggga 81
          |||||||||||||||||||
Sbjct: 33 atattatgggacggaggga 15




>49069_osa-miR818c:pmrd
          Length = 176

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 5   catccgtcccataatataa 23
           |||||||||||||||||||
Sbjct: 166 catccgtcccataatataa 148