miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>54705_tae-miR1130:pmrd
          Length = 122

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                             
Query: 45 aaaaacgtcttacattatgggacggagggagtata 79
          ||||||||||||||||| | |||||||||||||||
Sbjct: 43 aaaaacgtcttacattacgagacggagggagtata 9



 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 45  aaaaacgtcttacattatgggacggag 71
           |||||||||||||||||||||||||||
Sbjct: 79  aaaaacgtcttacattatgggacggag 105




>54695_tae-miR1120:pmrd
          Length = 119

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 35  tgtagtgtcaaaaaacgtcttacattatgggacggagggagtat 78
           ||||||||||||||   ||||| |||||| ||||||||||||||
Sbjct: 57  tgtagtgtcaaaaacattcttatattatgagacggagggagtat 100



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                    
Query: 52 tcttacattatgggacggagggagta 77
          ||||| ||||||||||||||||||||
Sbjct: 43 tcttatattatgggacggagggagta 18



 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 15 gtactccctccgtcccataat 35
          |||||||||||||||||||||
Sbjct: 17 gtactccctccgtcccataat 37




>51250_osa-miRf12035-akr:pmrd
          Length = 119

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 53  cttacattatgggacggagggagtata 79
           |||| ||||||||||||||||||||||
Sbjct: 89  cttatattatgggacggagggagtata 115



 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 53 cttacattatgggacggagggagta 77
          |||| ||||||||||||||||||||
Sbjct: 34 cttatattatgggacggagggagta 10



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 16 tactccctccgtcccataat 35
          ||||||||||||||||||||
Sbjct: 10 tactccctccgtcccataat 29



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 16  tactccctccgtcccataat 35
           ||||||||||||||||||||
Sbjct: 113 tactccctccgtcccataat 94




>50738_osa-miRf11523-akr:pmrd
          Length = 108

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 53 cttacattatgggacggagggagtata 79
          |||| ||||||||||||||||||||||
Sbjct: 73 cttatattatgggacggagggagtata 99



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 16 tactccctccgtcccataat 35
          ||||||||||||||||||||
Sbjct: 97 tactccctccgtcccataat 78




>49621_osa-miRf10406-akr:pmrd
          Length = 115

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 14  tgtactccctccgtcccataatg 36
           |||||||||||||||||||||||
Sbjct: 108 tgtactccctccgtcccataatg 86



 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 56 acattatgggacggagggagtatat 80
          |||||| ||||||||||||||||||
Sbjct: 31 acattacgggacggagggagtatat 7



 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 57  cattatgggacggagggagta 77
           |||||||||||||||||||||
Sbjct: 86  cattatgggacggagggagta 106




>49787_osa-miRf10572-akr:pmrd
          Length = 109

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 16  tactccctccgtcccataatgt 37
           ||||||||||||||||||||||
Sbjct: 101 tactccctccgtcccataatgt 80



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 56  acattatgggacggagggagta 77
           ||||||||||||||||||||||
Sbjct: 80  acattatgggacggagggagta 101



 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 57 cattatgggacggagggagta 77
          |||||||||||||||||||||
Sbjct: 29 cattatgggacggagggagta 9



 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 16 tactccctccgtcccataatg 36
          |||||||||||||||||||||
Sbjct: 9  tactccctccgtcccataatg 29




>49786_osa-miRf10571-akr:pmrd
          Length = 109

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 16  tactccctccgtcccataatgt 37
           ||||||||||||||||||||||
Sbjct: 101 tactccctccgtcccataatgt 80



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 56  acattatgggacggagggagta 77
           ||||||||||||||||||||||
Sbjct: 80  acattatgggacggagggagta 101



 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 57 cattatgggacggagggagta 77
          |||||||||||||||||||||
Sbjct: 29 cattatgggacggagggagta 9



 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 16 tactccctccgtcccataatg 36
          |||||||||||||||||||||
Sbjct: 9  tactccctccgtcccataatg 29




>49304_osa-miRf10089-akr:pmrd
          Length = 123

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 56 acattatgggacggagggagta 77
          ||||||||||||||||||||||
Sbjct: 22 acattatgggacggagggagta 1



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 16 tactccctccgtcccataatgt 37
          ||||||||||||||||||||||
Sbjct: 1  tactccctccgtcccataatgt 22




>49120_osa-miR1436:pmrd
          Length = 161

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 16  tactccctccgtcccataatgt 37
           ||||||||||||||||||||||
Sbjct: 142 tactccctccgtcccataatgt 121



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 56  acattatgggacggagggagta 77
           ||||||||||||||||||||||
Sbjct: 121 acattatgggacggagggagta 142



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 58 attatgggacggagggagta 77
          ||||||||||||||||||||
Sbjct: 31 attatgggacggagggagta 12



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 16 tactccctccgtcccataat 35
          ||||||||||||||||||||
Sbjct: 12 tactccctccgtcccataat 31




>51255_osa-miRf12040-akr:pmrd
          Length = 102

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 15 gtactccctccgtcccataat 35
          |||||||||||||||||||||
Sbjct: 8  gtactccctccgtcccataat 28



 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 53 cttacattatgggacggagggagta 77
          |||| ||||||||||||||||||||
Sbjct: 33 cttatattatgggacggagggagta 9




>51254_osa-miRf12039-akr:pmrd
          Length = 102

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 15 gtactccctccgtcccataat 35
          |||||||||||||||||||||
Sbjct: 8  gtactccctccgtcccataat 28



 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 53 cttacattatgggacggagggagta 77
          |||| ||||||||||||||||||||
Sbjct: 33 cttatattatgggacggagggagta 9




>50587_osa-miRf11372-akr:pmrd
          Length = 126

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 53 cttacattatgggacggagggagta 77
          |||| ||||||||||||||||||||
Sbjct: 31 cttatattatgggacggagggagta 7



 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 53  cttacattatgggacggagggagta 77
           |||| ||||||||||||||||||||
Sbjct: 97  cttatattatgggacggagggagta 121



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 16 tactccctccgtcccataat 35
          ||||||||||||||||||||
Sbjct: 7  tactccctccgtcccataat 26



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 16  tactccctccgtcccataat 35
           ||||||||||||||||||||
Sbjct: 121 tactccctccgtcccataat 102




>50397_osa-miRf11182-akr:pmrd
          Length = 80

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 58 attatgggacggagggagtat 78
          |||||||||||||||||||||
Sbjct: 49 attatgggacggagggagtat 69



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 16 tactccctccgtcccataat 35
          ||||||||||||||||||||
Sbjct: 68 tactccctccgtcccataat 49




>49070_osa-miR818d:pmrd
          Length = 139

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 53  cttacattatgggacggagggagta 77
           |||| ||||||||||||||||||||
Sbjct: 103 cttatattatgggacggagggagta 127



 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 15  gtactccctccgtcccataat 35
           |||||||||||||||||||||
Sbjct: 128 gtactccctccgtcccataat 108