miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>48304_ave-miR1120:pmrd
          Length = 85

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                               
Query: 39 atgatctaaacgtttttatatttctttacagatggag 75
          |||||||||||| | ||||||||||||||||| ||||
Sbjct: 44 atgatctaaacgctcttatatttctttacagagggag 80



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                              
Query: 40 tgatctaaacgtttttatatttctttacagatggag 75
          ||||||||||| | ||||||||||||||||| ||||
Sbjct: 41 tgatctaaacgctcttatatttctttacagagggag 6



 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 9  actccctccgtaaagaaatataa 31
          |||||||| ||||||||||||||
Sbjct: 5  actccctctgtaaagaaatataa 27



 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                 
Query: 9  actccctccgtaaagaaatataa 31
          |||||||| ||||||||||||||
Sbjct: 81 actccctctgtaaagaaatataa 59




>54696_tae-miR1121:pmrd
          Length = 98

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 9  actccctccgtaaagaaatataa 31
          |||||||||||||||||||||||
Sbjct: 92 actccctccgtaaagaaatataa 70



 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 40 tgatctaaacgtttttatatttctttac 67
          ||||||||||| | ||||||||||||||
Sbjct: 56 tgatctaaacgctcttatatttctttac 83




>54753_tae-miR2033b:pmrd
          Length = 72

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 58/69 (84%), Gaps = 2/69 (2%)
 Strand = Plus / Plus

                                                                      
Query: 9  actccctccgtaaagaaatataataaa--ataatgatctaaacgtttttatatttcttta 66
          ||||||||| ||||||||||||| |    ||| ||||||||||  | |||||||||||||
Sbjct: 2  actccctccataaagaaatataagagcgtatagtgatctaaacactcttatatttcttta 61

                   
Query: 67 cagatggag 75
          |||| ||||
Sbjct: 62 cagaaggag 70