miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>54898_vvi-miR535c:pmrd
Length = 101
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 12 tgacaacgagagagagcacgcttgtcagcat 42
|||||||||||||||||||||| ||||||||
Sbjct: 11 tgacaacgagagagagcacgctagtcagcat 41
>54897_vvi-miR535b:pmrd
Length = 101
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 12 tgacaacgagagagagcacgcttgtcagcat 42
|||||||||||||||||||||| ||||||||
Sbjct: 11 tgacaacgagagagagcacgctagtcagcat 41
>54896_vvi-miR535a:pmrd
Length = 101
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 12 tgacaacgagagagagcacgcttgtcagcat 42
|||||||||||||||||||||| ||||||||
Sbjct: 11 tgacaacgagagagagcacgctagtcagcat 41
>54390_rco-miR535:pmrd
Length = 91
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 12 tgacaacgagagagagcacgcttgt 36
|||||||||||||||||||||||||
Sbjct: 11 tgacaacgagagagagcacgcttgt 35
>54900_vvi-miR535e:pmrd
Length = 101
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 12 tgacaacgagagagagcacgcttgtcagcat 42
|||||||||||||||||||||| ||| ||||
Sbjct: 11 tgacaacgagagagagcacgctagtctgcat 41
>54899_vvi-miR535d:pmrd
Length = 101
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 12 tgacaacgagagagagcacgcttgtcagcat 42
|||||||||||||||||||||| ||| ||||
Sbjct: 11 tgacaacgagagagagcacgctagtctgcat 41
>51422_ppt-miR535c:pmrd
Length = 81
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 gtgacaacgagagagagcacgct 33
|||||||||||||||||||||||
Sbjct: 1 gtgacaacgagagagagcacgct 23
>51421_ppt-miR535b:pmrd
Length = 81
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 gtgacaacgagagagagcacgct 33
|||||||||||||||||||||||
Sbjct: 1 gtgacaacgagagagagcacgct 23
>51420_ppt-miR535a:pmrd
Length = 135
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 gtgacaacgagagagagcacgct 33
|||||||||||||||||||||||
Sbjct: 26 gtgacaacgagagagagcacgct 48
>51423_ppt-miR535d:pmrd
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 gtgacaacgagagagagcacgc 32
||||||||||||||||||||||
Sbjct: 2 gtgacaacgagagagagcacgc 23
>49023_osa-miR535:pmrd
Length = 94
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 gtgacaacgagagagagcacgc 32
||||||||||||||||||||||
Sbjct: 5 gtgacaacgagagagagcacgc 26
>46905_aqc-miR535:pmrd
Length = 87
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgacaacgagagagagcacgc 32
|||||||||||||||||||||
Sbjct: 1 tgacaacgagagagagcacgc 21
