miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>48699_mtr-miR159a:pmrd
          Length = 168

 Score =  333 bits (168), Expect = 3e-92
 Identities = 168/168 (100%)
 Strand = Plus / Plus

                                                                       
Query: 5   tggagcttcctttagtccaaatatggatcttgctatgttgatagagctgcttagctatgg 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tggagcttcctttagtccaaatatggatcttgctatgttgatagagctgcttagctatgg 60

                                                                       
Query: 65  gtccctcaactctacccatcttgttctttgtggtagttttgtggcttccatatctaggga 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gtccctcaactctacccatcttgttctttgtggtagttttgtggcttccatatctaggga 120

                                                           
Query: 125 gccttatcacctttagtttaatctttctttggattgaagggagctcta 172
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gccttatcacctttagtttaatctttctttggattgaagggagctcta 168




>54378_pvu-miR159:pmrd
          Length = 174

 Score = 65.9 bits (33), Expect = 1e-11
 Identities = 109/132 (82%), Gaps = 8/132 (6%)
 Strand = Plus / Plus

                                                                       
Query: 48  gagctgcttagctatgggtccctcaactctacccatct---tgttctttgtggtagtttt 104
           ||||||||||||||||| |||| ||  ||||||||||    ||||  |||||||||| ||
Sbjct: 45  gagctgcttagctatggatcccacagttctacccatcagcatgtt--ttgtggtagtctt 102

                                                                       
Query: 105 gtggcttccatatctagggagccttat---cacctttagtttaatctttctttggattga 161
           ||||||||||||||| |||||| | ||   |  || |||| | ||| |||||||||||||
Sbjct: 103 gtggcttccatatctggggagcttcatctgcctctatagtatcatccttctttggattga 162

                       
Query: 162 agggagctctac 173
           ||||||||||||
Sbjct: 163 agggagctctac 174




>54377_pvu-miR159:pmrd
          Length = 174

 Score = 65.9 bits (33), Expect = 1e-11
 Identities = 109/132 (82%), Gaps = 8/132 (6%)
 Strand = Plus / Plus

                                                                       
Query: 48  gagctgcttagctatgggtccctcaactctacccatct---tgttctttgtggtagtttt 104
           ||||||||||||||||| |||| ||  ||||||||||    ||||  |||||||||| ||
Sbjct: 45  gagctgcttagctatggatcccacagttctacccatcagcatgtt--ttgtggtagtctt 102

                                                                       
Query: 105 gtggcttccatatctagggagccttat---cacctttagtttaatctttctttggattga 161
           ||||||||||||||| |||||| | ||   |  || |||| | ||| |||||||||||||
Sbjct: 103 gtggcttccatatctggggagcttcatctgcctctatagtatcatccttctttggattga 162

                       
Query: 162 agggagctctac 173
           ||||||||||||
Sbjct: 163 agggagctctac 174




>48701_mtr-miR159c:pmrd
          Length = 44

 Score = 63.9 bits (32), Expect = 4e-11
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                           
Query: 152 tttggattgaagggagctctacatcttgctct 183
           ||||||||||||||||||||||||||||||||
Sbjct: 1   tttggattgaagggagctctacatcttgctct 32




>48728_mtr-miR319b:pmrd
          Length = 42

 Score = 61.9 bits (31), Expect = 2e-10
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                          
Query: 153 ttggattgaagggagctctacatcttgctct 183
           |||||||||||||||||||||||||||||||
Sbjct: 1   ttggattgaagggagctctacatcttgctct 31




>48820_osa-miR159b:pmrd
          Length = 188

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 150 tctttggattgaagggagctctacatcttg 179
           |||||||||||||||||||||| |||||||
Sbjct: 156 tctttggattgaagggagctctgcatcttg 185




>48539_gma-miR159a:pmrd
          Length = 214

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 149 ttctttggattgaagggagctctaca 174
           ||||||||||||||||||||||||||
Sbjct: 172 ttctttggattgaagggagctctaca 197



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 91  tttgtggtagttttgtggcttccatatctagggagc 126
           ||||||||||| ||||||||||||||| | ||||||
Sbjct: 111 tttgtggtagtcttgtggcttccatatttggggagc 146



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 48  gagctgcttagctatgggtccctcaactctacccatc 84
           ||||||||||||||||| |||| ||  ||||||||||
Sbjct: 64  gagctgcttagctatggatcccacagttctacccatc 100




>48395_bra-miR159a:pmrd
          Length = 185

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 149 ttctttggattgaagggagctctaca 174
           ||||||||||||||||||||||||||
Sbjct: 160 ttctttggattgaagggagctctaca 185




>48339_bna-miR159:pmrd
          Length = 183

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 149 ttctttggattgaagggagctctaca 174
           ||||||||||||||||||||||||||
Sbjct: 158 ttctttggattgaagggagctctaca 183




>48819_osa-miR159a:pmrd
          Length = 272

 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 150 tctttggattgaagggagctctacatctt 178
           |||||||||||||||||||||| ||||||
Sbjct: 240 tctttggattgaagggagctctgcatctt 268




>48796_oru-miR159:pmrd
          Length = 274

 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 150 tctttggattgaagggagctctacatctt 178
           |||||||||||||||||||||| ||||||
Sbjct: 240 tctttggattgaagggagctctgcatctt 268




>46932_ath-miR159b:pmrd
          Length = 196

 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 149 ttctttggattgaagggagctctacatct 177
           ||||||||||||||||||||||| |||||
Sbjct: 165 ttctttggattgaagggagctcttcatct 193




>46931_ath-miR159a:pmrd
          Length = 184

 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 149 ttctttggattgaagggagctctac 173
           |||||||||||||||||||||||||
Sbjct: 160 ttctttggattgaagggagctctac 184




>54931_zma-miR159b:pmrd
          Length = 221

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 152 tttggattgaagggagctctacatcttg 179
           |||||||||||||||||||| |||||||
Sbjct: 182 tttggattgaagggagctctgcatcttg 209




>54674_tae-miR159b:pmrd
          Length = 255

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 150 tctttggattgaagggagctctacatct 177
           |||||||||||||||||||||| |||||
Sbjct: 228 tctttggattgaagggagctctgcatct 255




>51603_ptc-miR159b:pmrd
          Length = 187

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 145 atctttctttggattgaagggagctcta 172
           |||||| |||||||||||||||||||||
Sbjct: 151 atctttttttggattgaagggagctcta 178




>48686_ltu-miR159:pmrd
          Length = 345

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 152 tttggattgaagggagctctacatcttgctct 183
           ||||||||||||||||||||||| | ||||||
Sbjct: 1   tttggattgaagggagctctacaccatgctct 32




>48656_hvv-miR159a:pmrd
          Length = 303

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 152 tttggattgaagggagctctacatcttg 179
           |||||||||||||||||||| |||||||
Sbjct: 1   tttggattgaagggagctctgcatcttg 28




>54930_zma-miR159a:pmrd
          Length = 246

 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 150 tctttggattgaagggagctctacatc 176
           |||||||||||||||||||||| ||||
Sbjct: 205 tctttggattgaagggagctctgcatc 231




>54777_vvi-miR159c:pmrd
          Length = 190

 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 152 tttggattgaagggagctctaca 174
           |||||||||||||||||||||||
Sbjct: 160 tttggattgaagggagctctaca 182




>54631_sof-miR159d:pmrd
          Length = 265

 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 150 tctttggattgaagggagctctacatc 176
           |||||||||||||||||||||| ||||
Sbjct: 224 tctttggattgaagggagctctgcatc 250




>54629_sof-miR159b:pmrd
          Length = 266

 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 150 tctttggattgaagggagctctacatc 176
           |||||||||||||||||||||| ||||
Sbjct: 225 tctttggattgaagggagctctgcatc 251




>54628_sof-miR159a:pmrd
          Length = 265

 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 150 tctttggattgaagggagctctacatc 176
           |||||||||||||||||||||| ||||
Sbjct: 224 tctttggattgaagggagctctgcatc 250




>54392_sar-miR159:pmrd
          Length = 175

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 150 tctttggattgaagggagctct 171
           ||||||||||||||||||||||
Sbjct: 153 tctttggattgaagggagctct 174




>51338_pgl-miR159:pmrd
          Length = 226

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 150 tctttggattgaagggagctct 171
           ||||||||||||||||||||||
Sbjct: 204 tctttggattgaagggagctct 225




>48825_osa-miR159m:pmrd
          Length = 249

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 150 tctttggattgaagggagctct 171
           ||||||||||||||||||||||
Sbjct: 227 tctttggattgaagggagctct 248




>48824_osa-miR159f:pmrd
          Length = 188

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 153 ttggattgaagggagctctaca 174
           ||||||||||||||||||||||
Sbjct: 159 ttggattgaagggagctctaca 180




>54937_zma-miR159m:pmrd
          Length = 457

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 152 tttggattgaagggagctctacatc 176
           |||||||||||||||||||| ||||
Sbjct: 1   tttggattgaagggagctctgcatc 25




>54653_spr-miR159:pmrd
          Length = 392

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 152 tttggattgaagggagctctacatc 176
           |||||||||||||||||||| ||||
Sbjct: 1   tttggattgaagggagctctgcatc 25




>54540_sly-miR159:pmrd
          Length = 177

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 152 tttggattgaagggagctcta 172
           |||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctcta 177




>52093_ptc-miRf10271-akr:pmrd
          Length = 174

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 152 tttggattgaagggagctcta 172
           |||||||||||||||||||||
Sbjct: 149 tttggattgaagggagctcta 169




>51604_ptc-miR159c:pmrd
          Length = 183

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 152 tttggattgaagggagctcta 172
           |||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174




>51602_ptc-miR159a:pmrd
          Length = 183

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 152 tttggattgaagggagctcta 172
           |||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174




>48821_osa-miR159c:pmrd
          Length = 197

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 153 ttggattgaagggagctctacatct 177
           |||||||||||||||||| ||||||
Sbjct: 168 ttggattgaagggagctccacatct 192