miRNEST 2.0, an integrative microRNA resource :: BLAST
>48699_mtr-miR159a:pmrd
Length = 168
Score = 333 bits (168), Expect = 3e-92
Identities = 168/168 (100%)
Strand = Plus / Plus
Query: 5 tggagcttcctttagtccaaatatggatcttgctatgttgatagagctgcttagctatgg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggagcttcctttagtccaaatatggatcttgctatgttgatagagctgcttagctatgg 60
Query: 65 gtccctcaactctacccatcttgttctttgtggtagttttgtggcttccatatctaggga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtccctcaactctacccatcttgttctttgtggtagttttgtggcttccatatctaggga 120
Query: 125 gccttatcacctttagtttaatctttctttggattgaagggagctcta 172
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gccttatcacctttagtttaatctttctttggattgaagggagctcta 168
>54378_pvu-miR159:pmrd
Length = 174
Score = 65.9 bits (33), Expect = 1e-11
Identities = 109/132 (82%), Gaps = 8/132 (6%)
Strand = Plus / Plus
Query: 48 gagctgcttagctatgggtccctcaactctacccatct---tgttctttgtggtagtttt 104
||||||||||||||||| |||| || |||||||||| |||| |||||||||| ||
Sbjct: 45 gagctgcttagctatggatcccacagttctacccatcagcatgtt--ttgtggtagtctt 102
Query: 105 gtggcttccatatctagggagccttat---cacctttagtttaatctttctttggattga 161
||||||||||||||| |||||| | || | || |||| | ||| |||||||||||||
Sbjct: 103 gtggcttccatatctggggagcttcatctgcctctatagtatcatccttctttggattga 162
Query: 162 agggagctctac 173
||||||||||||
Sbjct: 163 agggagctctac 174
>54377_pvu-miR159:pmrd
Length = 174
Score = 65.9 bits (33), Expect = 1e-11
Identities = 109/132 (82%), Gaps = 8/132 (6%)
Strand = Plus / Plus
Query: 48 gagctgcttagctatgggtccctcaactctacccatct---tgttctttgtggtagtttt 104
||||||||||||||||| |||| || |||||||||| |||| |||||||||| ||
Sbjct: 45 gagctgcttagctatggatcccacagttctacccatcagcatgtt--ttgtggtagtctt 102
Query: 105 gtggcttccatatctagggagccttat---cacctttagtttaatctttctttggattga 161
||||||||||||||| |||||| | || | || |||| | ||| |||||||||||||
Sbjct: 103 gtggcttccatatctggggagcttcatctgcctctatagtatcatccttctttggattga 162
Query: 162 agggagctctac 173
||||||||||||
Sbjct: 163 agggagctctac 174
>48701_mtr-miR159c:pmrd
Length = 44
Score = 63.9 bits (32), Expect = 4e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 152 tttggattgaagggagctctacatcttgctct 183
||||||||||||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctacatcttgctct 32
>48728_mtr-miR319b:pmrd
Length = 42
Score = 61.9 bits (31), Expect = 2e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 153 ttggattgaagggagctctacatcttgctct 183
|||||||||||||||||||||||||||||||
Sbjct: 1 ttggattgaagggagctctacatcttgctct 31
>48820_osa-miR159b:pmrd
Length = 188
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 150 tctttggattgaagggagctctacatcttg 179
|||||||||||||||||||||| |||||||
Sbjct: 156 tctttggattgaagggagctctgcatcttg 185
>48539_gma-miR159a:pmrd
Length = 214
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 149 ttctttggattgaagggagctctaca 174
||||||||||||||||||||||||||
Sbjct: 172 ttctttggattgaagggagctctaca 197
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 91 tttgtggtagttttgtggcttccatatctagggagc 126
||||||||||| ||||||||||||||| | ||||||
Sbjct: 111 tttgtggtagtcttgtggcttccatatttggggagc 146
Score = 42.1 bits (21), Expect = 1e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 48 gagctgcttagctatgggtccctcaactctacccatc 84
||||||||||||||||| |||| || ||||||||||
Sbjct: 64 gagctgcttagctatggatcccacagttctacccatc 100
>48395_bra-miR159a:pmrd
Length = 185
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 149 ttctttggattgaagggagctctaca 174
||||||||||||||||||||||||||
Sbjct: 160 ttctttggattgaagggagctctaca 185
>48339_bna-miR159:pmrd
Length = 183
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 149 ttctttggattgaagggagctctaca 174
||||||||||||||||||||||||||
Sbjct: 158 ttctttggattgaagggagctctaca 183
>48819_osa-miR159a:pmrd
Length = 272
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 150 tctttggattgaagggagctctacatctt 178
|||||||||||||||||||||| ||||||
Sbjct: 240 tctttggattgaagggagctctgcatctt 268
>48796_oru-miR159:pmrd
Length = 274
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 150 tctttggattgaagggagctctacatctt 178
|||||||||||||||||||||| ||||||
Sbjct: 240 tctttggattgaagggagctctgcatctt 268
>46932_ath-miR159b:pmrd
Length = 196
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 149 ttctttggattgaagggagctctacatct 177
||||||||||||||||||||||| |||||
Sbjct: 165 ttctttggattgaagggagctcttcatct 193
>46931_ath-miR159a:pmrd
Length = 184
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 149 ttctttggattgaagggagctctac 173
|||||||||||||||||||||||||
Sbjct: 160 ttctttggattgaagggagctctac 184
>54931_zma-miR159b:pmrd
Length = 221
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 152 tttggattgaagggagctctacatcttg 179
|||||||||||||||||||| |||||||
Sbjct: 182 tttggattgaagggagctctgcatcttg 209
>54674_tae-miR159b:pmrd
Length = 255
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 150 tctttggattgaagggagctctacatct 177
|||||||||||||||||||||| |||||
Sbjct: 228 tctttggattgaagggagctctgcatct 255
>51603_ptc-miR159b:pmrd
Length = 187
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 145 atctttctttggattgaagggagctcta 172
|||||| |||||||||||||||||||||
Sbjct: 151 atctttttttggattgaagggagctcta 178
>48686_ltu-miR159:pmrd
Length = 345
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 152 tttggattgaagggagctctacatcttgctct 183
||||||||||||||||||||||| | ||||||
Sbjct: 1 tttggattgaagggagctctacaccatgctct 32
>48656_hvv-miR159a:pmrd
Length = 303
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 152 tttggattgaagggagctctacatcttg 179
|||||||||||||||||||| |||||||
Sbjct: 1 tttggattgaagggagctctgcatcttg 28
>54930_zma-miR159a:pmrd
Length = 246
Score = 46.1 bits (23), Expect = 9e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 150 tctttggattgaagggagctctacatc 176
|||||||||||||||||||||| ||||
Sbjct: 205 tctttggattgaagggagctctgcatc 231
>54777_vvi-miR159c:pmrd
Length = 190
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 152 tttggattgaagggagctctaca 174
|||||||||||||||||||||||
Sbjct: 160 tttggattgaagggagctctaca 182
>54631_sof-miR159d:pmrd
Length = 265
Score = 46.1 bits (23), Expect = 9e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 150 tctttggattgaagggagctctacatc 176
|||||||||||||||||||||| ||||
Sbjct: 224 tctttggattgaagggagctctgcatc 250
>54629_sof-miR159b:pmrd
Length = 266
Score = 46.1 bits (23), Expect = 9e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 150 tctttggattgaagggagctctacatc 176
|||||||||||||||||||||| ||||
Sbjct: 225 tctttggattgaagggagctctgcatc 251
>54628_sof-miR159a:pmrd
Length = 265
Score = 46.1 bits (23), Expect = 9e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 150 tctttggattgaagggagctctacatc 176
|||||||||||||||||||||| ||||
Sbjct: 224 tctttggattgaagggagctctgcatc 250
>54392_sar-miR159:pmrd
Length = 175
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 150 tctttggattgaagggagctct 171
||||||||||||||||||||||
Sbjct: 153 tctttggattgaagggagctct 174
>51338_pgl-miR159:pmrd
Length = 226
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 150 tctttggattgaagggagctct 171
||||||||||||||||||||||
Sbjct: 204 tctttggattgaagggagctct 225
>48825_osa-miR159m:pmrd
Length = 249
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 150 tctttggattgaagggagctct 171
||||||||||||||||||||||
Sbjct: 227 tctttggattgaagggagctct 248
>48824_osa-miR159f:pmrd
Length = 188
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 153 ttggattgaagggagctctaca 174
||||||||||||||||||||||
Sbjct: 159 ttggattgaagggagctctaca 180
>54937_zma-miR159m:pmrd
Length = 457
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 152 tttggattgaagggagctctacatc 176
|||||||||||||||||||| ||||
Sbjct: 1 tttggattgaagggagctctgcatc 25
>54653_spr-miR159:pmrd
Length = 392
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 152 tttggattgaagggagctctacatc 176
|||||||||||||||||||| ||||
Sbjct: 1 tttggattgaagggagctctgcatc 25
>54540_sly-miR159:pmrd
Length = 177
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 152 tttggattgaagggagctcta 172
|||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctcta 177
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 152 tttggattgaagggagctcta 172
|||||||||||||||||||||
Sbjct: 149 tttggattgaagggagctcta 169
>51604_ptc-miR159c:pmrd
Length = 183
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 152 tttggattgaagggagctcta 172
|||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174
>51602_ptc-miR159a:pmrd
Length = 183
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 152 tttggattgaagggagctcta 172
|||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174
>48821_osa-miR159c:pmrd
Length = 197
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 153 ttggattgaagggagctctacatct 177
|||||||||||||||||| ||||||
Sbjct: 168 ttggattgaagggagctccacatct 192