miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48709_mtr-miR164b:pmrd
Length = 144
Score = 244 bits (123), Expect = 2e-65
Identities = 137/144 (95%)
Strand = Plus / Plus
Query: 1 caagatggagaagcagggcacgtgcaatactaactcatgaacatacacacatgatggaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caagatggagaagcagggcacgtgcaatactaactcatgaacatacacacatgatggaag 60
Query: 61 tgaatacaaagagaatctacattctcttatgtttcannnnnnnaattgagttagttcttc 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 61 tgaatacaaagagaatctacattctcttatgtttcatttttttaattgagttagttcttc 120
Query: 121 atgtgcccctcttccccatcatga 144
||||||||||||||||||||||||
Sbjct: 121 atgtgcccctcttccccatcatga 144
>53142_ptc-miRf11320-akr:pmrd
Length = 167
Score = 69.9 bits (35), Expect = 5e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 1 caagatggagaagcagggcacgtgcaatactaactcatg 39
|||||||||||||||||||||||||| ||||||||||||
Sbjct: 10 caagatggagaagcagggcacgtgcattactaactcatg 48
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 108 gagttagttcttcatgtgcccctcttccccatcatga 144
|||||||||||||||||||| |||||||||||||||
Sbjct: 121 gagttagttcttcatgtgcctgtcttccccatcatga 157
>52901_ptc-miRf11079-akr:pmrd
Length = 171
Score = 69.9 bits (35), Expect = 5e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 1 caagatggagaagcagggcacgtgcaatactaactcatg 39
|||||||||||||||||||||||||| ||||||||||||
Sbjct: 10 caagatggagaagcagggcacgtgcactactaactcatg 48
>51623_ptc-miR164e:pmrd
Length = 155
Score = 69.9 bits (35), Expect = 5e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 1 caagatggagaagcagggcacgtgcaatactaactcatg 39
|||||||||||||||||||||||||| ||||||||||||
Sbjct: 6 caagatggagaagcagggcacgtgcattactaactcatg 44
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 108 gagttagttcttcatgtgcccctcttccccatcatga 144
|||||||||||||||||||| |||||||||||||||
Sbjct: 117 gagttagttcttcatgtgcctgtcttccccatcatga 153
>51620_ptc-miR164b:pmrd
Length = 162
Score = 69.9 bits (35), Expect = 5e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 1 caagatggagaagcagggcacgtgcaatactaactcatg 39
|||||||||||||||||||||||||| ||||||||||||
Sbjct: 6 caagatggagaagcagggcacgtgcactactaactcatg 44
>51348_ppl-miR164:pmrd
Length = 159
Score = 69.9 bits (35), Expect = 5e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 1 caagatggagaagcagggcacgtgcaatactaactcatg 39
|||||||||||||||||||||||||| ||||||||||||
Sbjct: 6 caagatggagaagcagggcacgtgcattactaactcatg 44
Score = 60.0 bits (30), Expect = 5e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 107 tgagttagttcttcatgtgcccctcttccccatcatga 144
||||||||||||||||||||| |||||||||||||||
Sbjct: 116 tgagttagttcttcatgtgcctgtcttccccatcatga 153
>54787_vvi-miR164c:pmrd
Length = 97
Score = 61.9 bits (31), Expect = 1e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 1 caagatggagaagcagggcacgtgcaatactaactcatg 39
|||||||||||||||||||||||||| ||||| ||||||
Sbjct: 6 caagatggagaagcagggcacgtgcattactagctcatg 44
>47347_ath-miRf10247-akr:pmrd
Length = 159
Score = 60.0 bits (30), Expect = 5e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 1 caagatggagaagcagggcacgtgcaatactaactcat 38
|||||||||||||||||||||||||| ||||| |||||
Sbjct: 1 caagatggagaagcagggcacgtgcattactagctcat 38
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 107 tgagttagttcttcatgtgcccctcttccccatcatg 143
|||||||||||||||||||||| ||||| ||||||||
Sbjct: 123 tgagttagttcttcatgtgcccatcttcaccatcatg 159
>48473_csi-miR164:pmrd
Length = 168
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 6 tggagaagcagggcacgtgcaatactaactca 37
||||||||||||||||||||| ||||||||||
Sbjct: 1 tggagaagcagggcacgtgcattactaactca 32
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 106 ttgagttagttcttcatgtgcccctcttcccca 138
|||||||| |||||||||||||| |||||||||
Sbjct: 136 ttgagttatttcttcatgtgcccttcttcccca 168
>46941_ath-miR164b:pmrd
Length = 153
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 4 gatggagaagcagggcacgtgcaatactaactcat 38
||||||||||||||||||||||| ||||| |||||
Sbjct: 1 gatggagaagcagggcacgtgcattactagctcat 35
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 107 tgagttagttcttcatgtgcccctcttccccatc 140
|||||||||||||||||||||| ||||| |||||
Sbjct: 120 tgagttagttcttcatgtgcccatcttcaccatc 153
>54788_vvi-miR164d:pmrd
Length = 118
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 4 gatggagaagcagggcacgtgca 26
|||||||||||||||||||||||
Sbjct: 9 gatggagaagcagggcacgtgca 31
>48419_cav-miR164:pmrd
Length = 95
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 6 tggagaagcagggcacgtgcaat 28
|||||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgcaat 33
>51862_ptc-miRf10040-akr:pmrd
Length = 91
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 tggagaagcagggcacgtgcaa 27
||||||||||||||||||||||
Sbjct: 77 tggagaagcagggcacgtgcaa 56
>51622_ptc-miR164d:pmrd
Length = 99
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 tggagaagcagggcacgtgcaa 27
||||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgcaa 32
>51621_ptc-miR164c:pmrd
Length = 82
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 tggagaagcagggcacgtgcaa 27
||||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgcaa 32
>51619_ptc-miR164a:pmrd
Length = 85
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 tggagaagcagggcacgtgcaa 27
||||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgcaa 32
>48710_mtr-miR164c:pmrd
Length = 86
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 tggagaagcagggcacgtgcaa 27
||||||||||||||||||||||
Sbjct: 6 tggagaagcagggcacgtgcaa 27
>48708_mtr-miR164a:pmrd
Length = 99
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 tggagaagcagggcacgtgcaa 27
||||||||||||||||||||||
Sbjct: 6 tggagaagcagggcacgtgcaa 27
>48547_gma-miR164:pmrd
Length = 95
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 tggagaagcagggcacgtgcaa 27
||||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgcaa 32
>48398_bra-miR164a:pmrd
Length = 92
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 tggagaagcagggcacgtgcaa 27
||||||||||||||||||||||
Sbjct: 10 tggagaagcagggcacgtgcaa 31
>48341_bna-miR164:pmrd
Length = 86
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 tggagaagcagggcacgtgcaa 27
||||||||||||||||||||||
Sbjct: 7 tggagaagcagggcacgtgcaa 28
>47540_ath-miRf10440-akr:pmrd
Length = 113
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 tggagaagcagggcacgtgcaa 27
||||||||||||||||||||||
Sbjct: 95 tggagaagcagggcacgtgcaa 74
>47539_ath-miRf10439-akr:pmrd
Length = 115
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 tggagaagcagggcacgtgcaa 27
||||||||||||||||||||||
Sbjct: 96 tggagaagcagggcacgtgcaa 75
>46942_ath-miR164c:pmrd
Length = 102
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 4 gatggagaagcagggcacgtgc 25
||||||||||||||||||||||
Sbjct: 9 gatggagaagcagggcacgtgc 30
>46940_ath-miR164a:pmrd
Length = 113
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 tggagaagcagggcacgtgcaa 27
||||||||||||||||||||||
Sbjct: 19 tggagaagcagggcacgtgcaa 40
>54956_zma-miR164h:pmrd
Length = 96
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tggagaagcagggcacgtgca 26
|||||||||||||||||||||
Sbjct: 4 tggagaagcagggcacgtgca 24
>54955_zma-miR164g:pmrd
Length = 116
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tggagaagcagggcacgtgca 26
|||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgca 21
>54954_zma-miR164f:pmrd
Length = 177
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tggagaagcagggcacgtgca 26
|||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgca 21
>54953_zma-miR164e:pmrd
Length = 242
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tggagaagcagggcacgtgca 26
|||||||||||||||||||||
Sbjct: 4 tggagaagcagggcacgtgca 24
>54952_zma-miR164d:pmrd
Length = 216
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tggagaagcagggcacgtgca 26
|||||||||||||||||||||
Sbjct: 20 tggagaagcagggcacgtgca 40
>54951_zma-miR164c:pmrd
Length = 270
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tggagaagcagggcacgtgca 26
|||||||||||||||||||||
Sbjct: 18 tggagaagcagggcacgtgca 38
>54950_zma-miR164b:pmrd
Length = 128
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tggagaagcagggcacgtgca 26
|||||||||||||||||||||
Sbjct: 21 tggagaagcagggcacgtgca 41
>54949_zma-miR164a:pmrd
Length = 152
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tggagaagcagggcacgtgca 26
|||||||||||||||||||||
Sbjct: 19 tggagaagcagggcacgtgca 39
>54785_vvi-miR164a:pmrd
Length = 121
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tggagaagcagggcacgtgca 26
|||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31
>54676_tae-miR164b:pmrd
Length = 152
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tggagaagcagggcacgtgca 26
|||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgca 21
>54414_sbi-miR164e:pmrd
Length = 205
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tggagaagcagggcacgtgca 26
|||||||||||||||||||||
Sbjct: 3 tggagaagcagggcacgtgca 23
>54413_sbi-miR164d:pmrd
Length = 160
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tggagaagcagggcacgtgca 26
|||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgca 21
>54410_sbi-miR164:pmrd
Length = 126
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tggagaagcagggcacgtgca 26
|||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgca 21
>50414_osa-miRf11199-akr:pmrd
Length = 146
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tggagaagcagggcacgtgca 26
|||||||||||||||||||||
Sbjct: 13 tggagaagcagggcacgtgca 33
>48843_osa-miR164f:pmrd
Length = 210
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tggagaagcagggcacgtgca 26
|||||||||||||||||||||
Sbjct: 24 tggagaagcagggcacgtgca 44
>48839_osa-miR164b:pmrd
Length = 109
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tggagaagcagggcacgtgca 26
|||||||||||||||||||||
Sbjct: 9 tggagaagcagggcacgtgca 29
>48838_osa-miR164a:pmrd
Length = 156
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tggagaagcagggcacgtgca 26
|||||||||||||||||||||
Sbjct: 17 tggagaagcagggcacgtgca 37
>54411_sbi-miR164b:pmrd
Length = 111
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 6 tggagaagcagggcacgtgc 25
||||||||||||||||||||
Sbjct: 21 tggagaagcagggcacgtgc 40
>48841_osa-miR164d:pmrd
Length = 94
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 6 tggagaagcagggcacgtgc 25
||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgc 30
