miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48720_mtr-miR169d:pmrd
Length = 95
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 84 tgatgagtatgtcccttgtttagttt 109
||||||||||||||||||||||||||
Sbjct: 45 tgatgagtatgtcccttgtttagttt 70
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 6 aagccaaggatgacttgcctagctaaaaaccatt 39
|||||||||||||||||| |||||||||||||
Sbjct: 1 aagccaaggatgacttgctgggctaaaaaccatt 34
>55008_zma-miR169f:pmrd
Length = 150
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 7 agccaaggatgacttgcctag 27
|||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgcctag 42
>55015_zma-miR169m:pmrd
Length = 89
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 7 agccaaggatgacttgccta 26
||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccta 21
>55014_zma-miR169l:pmrd
Length = 89
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 7 agccaaggatgacttgccta 26
||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccta 21
>55010_zma-miR169h:pmrd
Length = 128
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 7 agccaaggatgacttgccta 26
||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgccta 41
>55009_zma-miR169g:pmrd
Length = 140
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 7 agccaaggatgacttgccta 26
||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgccta 41
>55007_zma-miR169e:pmrd
Length = 128
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 7 agccaaggatgacttgccta 26
||||||||||||||||||||
Sbjct: 108 agccaaggatgacttgccta 89
>55006_zma-miR169d:pmrd
Length = 128
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 7 agccaaggatgacttgccta 26
||||||||||||||||||||
Sbjct: 108 agccaaggatgacttgccta 89
>54826_vvi-miR169x:pmrd
Length = 125
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 7 agccaaggatgacttgccta 26
||||||||||||||||||||
Sbjct: 13 agccaaggatgacttgccta 32
>54550_sly-miR169d:pmrd
Length = 176
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 7 agccaaggatgacttgccta 26
||||||||||||||||||||
Sbjct: 40 agccaaggatgacttgccta 59
>54450_sbi-miR169n:pmrd
Length = 93
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 7 agccaaggatgacttgccta 26
||||||||||||||||||||
Sbjct: 4 agccaaggatgacttgccta 23
>54449_sbi-miR169m:pmrd
Length = 92
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 7 agccaaggatgacttgccta 26
||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccta 21
>54440_sbi-miR169d:pmrd
Length = 125
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 7 agccaaggatgacttgccta 26
||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgccta 41
>54439_sbi-miR169c:pmrd
Length = 126
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 7 agccaaggatgacttgccta 26
||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgccta 41
>51675_ptc-miR169r:pmrd
Length = 119
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 7 agccaaggatgacttgccta 26
||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgccta 31
>51673_ptc-miR169p:pmrd
Length = 104
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 6 aagccaaggatgacttgcct 25
||||||||||||||||||||
Sbjct: 11 aagccaaggatgacttgcct 30
>51672_ptc-miR169o:pmrd
Length = 104
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 6 aagccaaggatgacttgcct 25
||||||||||||||||||||
Sbjct: 11 aagccaaggatgacttgcct 30
>48882_osa-miR169g:pmrd
Length = 126
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 7 agccaaggatgacttgccta 26
||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgccta 31
>48881_osa-miR169f:pmrd
Length = 170
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 7 agccaaggatgacttgccta 26
||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgccta 31
>48355_bna-miR169f:pmrd
Length = 201
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 7 agccaaggatgacttgccta 26
||||||||||||||||||||
Sbjct: 32 agccaaggatgacttgccta 51
>48354_bna-miR169e:pmrd
Length = 276
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 7 agccaaggatgacttgccta 26
||||||||||||||||||||
Sbjct: 252 agccaaggatgacttgccta 271
>48353_bna-miR169d:pmrd
Length = 220
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 7 agccaaggatgacttgccta 26
||||||||||||||||||||
Sbjct: 41 agccaaggatgacttgccta 60
>48352_bna-miR169c:pmrd
Length = 176
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 7 agccaaggatgacttgccta 26
||||||||||||||||||||
Sbjct: 27 agccaaggatgacttgccta 46
>46873_aqc-miR169a:pmrd
Length = 158
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 7 agccaaggatgacttgccta 26
||||||||||||||||||||
Sbjct: 27 agccaaggatgacttgccta 46
