miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48561_gma-miR169a:pmrd
Length = 121
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 3 atgcagccaaggatgacttgccggcg 28
||||||||||||||||||||||||||
Sbjct: 18 atgcagccaaggatgacttgccggcg 43
>55005_zma-miR169c:pmrd
Length = 134
Score = 50.1 bits (25), Expect = 7e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 3 atgcagccaaggatgacttgccggc 27
|||||||||||||||||||||||||
Sbjct: 18 atgcagccaaggatgacttgccggc 42
>51664_ptc-miR169g:pmrd
Length = 106
Score = 50.1 bits (25), Expect = 7e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 3 atgcagccaaggatgacttgccggc 27
|||||||||||||||||||||||||
Sbjct: 8 atgcagccaaggatgacttgccggc 32
>51661_ptc-miR169d:pmrd
Length = 111
Score = 50.1 bits (25), Expect = 7e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 3 atgcagccaaggatgacttgccggc 27
|||||||||||||||||||||||||
Sbjct: 8 atgcagccaaggatgacttgccggc 32
>51339_phy-miR169:pmrd
Length = 146
Score = 50.1 bits (25), Expect = 7e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 3 atgcagccaaggatgacttgccggc 27
|||||||||||||||||||||||||
Sbjct: 12 atgcagccaaggatgacttgccggc 36
>50631_osa-miRf11416-akr:pmrd
Length = 141
Score = 50.1 bits (25), Expect = 7e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 3 atgcagccaaggatgacttgccggc 27
|||||||||||||||||||||||||
Sbjct: 126 atgcagccaaggatgacttgccggc 102
>50630_osa-miRf11415-akr:pmrd
Length = 147
Score = 50.1 bits (25), Expect = 7e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 3 atgcagccaaggatgacttgccggc 27
|||||||||||||||||||||||||
Sbjct: 19 atgcagccaaggatgacttgccggc 43
>49845_osa-miRf10630-akr:pmrd
Length = 114
Score = 50.1 bits (25), Expect = 7e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 3 atgcagccaaggatgacttgccggc 27
|||||||||||||||||||||||||
Sbjct: 106 atgcagccaaggatgacttgccggc 82
>48891_osa-miR169p:pmrd
Length = 126
Score = 50.1 bits (25), Expect = 7e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 3 atgcagccaaggatgacttgccggc 27
|||||||||||||||||||||||||
Sbjct: 119 atgcagccaaggatgacttgccggc 95
>48878_osa-miR169c:pmrd
Length = 112
Score = 50.1 bits (25), Expect = 7e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 3 atgcagccaaggatgacttgccggc 27
|||||||||||||||||||||||||
Sbjct: 8 atgcagccaaggatgacttgccggc 32
>54825_vvi-miR169w:pmrd
Length = 143
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 4 tgcagccaaggatgacttgccggc 27
||||||||||||||||||||||||
Sbjct: 11 tgcagccaaggatgacttgccggc 34
>54821_vvi-miR169s:pmrd
Length = 99
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 4 tgcagccaaggatgacttgccggc 27
||||||||||||||||||||||||
Sbjct: 11 tgcagccaaggatgacttgccggc 34
>54805_vvi-miR169c:pmrd
Length = 90
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 3 atgcagccaaggatgacttgccgg 26
||||||||||||||||||||||||
Sbjct: 10 atgcagccaaggatgacttgccgg 33
>54803_vvi-miR169a:pmrd
Length = 124
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 3 atgcagccaaggatgacttgccgg 26
||||||||||||||||||||||||
Sbjct: 10 atgcagccaaggatgacttgccgg 33
>51652_ptc-miR169a:pmrd
Length = 165
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 2 tatgcagccaaggatgacttgccg 25
||||||||||||||||||||||||
Sbjct: 7 tatgcagccaaggatgacttgccg 30
>48877_osa-miR169b:pmrd
Length = 128
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 3 atgcagccaaggatgacttgccgg 26
||||||||||||||||||||||||
Sbjct: 8 atgcagccaaggatgacttgccgg 31
>47961_ath-miRf10861-akr:pmrd
Length = 109
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 3 atgcagccaaggatgacttgccgg 26
||||||||||||||||||||||||
Sbjct: 2 atgcagccaaggatgacttgccgg 25
>47674_ath-miRf10574-akr:pmrd
Length = 123
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 3 atgcagccaaggatgacttgccgg 26
||||||||||||||||||||||||
Sbjct: 115 atgcagccaaggatgacttgccgg 92
>46961_ath-miR169b:pmrd
Length = 181
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 3 atgcagccaaggatgacttgccgg 26
||||||||||||||||||||||||
Sbjct: 40 atgcagccaaggatgacttgccgg 63
>46875_aqc-miR169c:pmrd
Length = 111
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 3 atgcagccaaggatgacttgccgg 26
||||||||||||||||||||||||
Sbjct: 2 atgcagccaaggatgacttgccgg 25
>54813_vvi-miR169k:pmrd
Length = 122
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 4 tgcagccaaggatgacttgccgg 26
|||||||||||||||||||||||
Sbjct: 11 tgcagccaaggatgacttgccgg 33
>54812_vvi-miR169j:pmrd
Length = 122
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 4 tgcagccaaggatgacttgccgg 26
|||||||||||||||||||||||
Sbjct: 11 tgcagccaaggatgacttgccgg 33
>54547_sly-miR169a:pmrd
Length = 149
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 4 tgcagccaaggatgacttgccgg 26
|||||||||||||||||||||||
Sbjct: 39 tgcagccaaggatgacttgccgg 61
>52003_ptc-miRf10181-akr:pmrd
Length = 113
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 3 atgcagccaaggatgacttgccg 25
|||||||||||||||||||||||
Sbjct: 7 atgcagccaaggatgacttgccg 29
>51663_ptc-miR169f:pmrd
Length = 239
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 4 tgcagccaaggatgacttgccgg 26
|||||||||||||||||||||||
Sbjct: 9 tgcagccaaggatgacttgccgg 31
>51662_ptc-miR169e:pmrd
Length = 166
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 5 gcagccaaggatgacttgccggc 27
|||||||||||||||||||||||
Sbjct: 10 gcagccaaggatgacttgccggc 32
>51660_ptc-miR169c:pmrd
Length = 102
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 3 atgcagccaaggatgacttgccg 25
|||||||||||||||||||||||
Sbjct: 8 atgcagccaaggatgacttgccg 30
>51659_ptc-miR169b:pmrd
Length = 113
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 3 atgcagccaaggatgacttgccg 25
|||||||||||||||||||||||
Sbjct: 8 atgcagccaaggatgacttgccg 30
>48718_mtr-miR169b:pmrd
Length = 121
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 3 atgcagccaaggatgacttgccg 25
|||||||||||||||||||||||
Sbjct: 18 atgcagccaaggatgacttgccg 40
>48717_mtr-miR169a:pmrd
Length = 121
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 3 atgcagccaaggatgacttgccg 25
|||||||||||||||||||||||
Sbjct: 18 atgcagccaaggatgacttgccg 40
>48309_bdi-miR169a:pmrd
Length = 121
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 3 atgcagccaaggatgacttgccg 25
|||||||||||||||||||||||
Sbjct: 13 atgcagccaaggatgacttgccg 35
>55020_zma-miR169r:pmrd
Length = 95
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 cagccaaggatgacttgccggc 27
||||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccggc 22
>55004_zma-miR169b:pmrd
Length = 156
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 4 tgcagccaaggatgacttgccg 25
||||||||||||||||||||||
Sbjct: 19 tgcagccaaggatgacttgccg 40
>55003_zma-miR169a:pmrd
Length = 130
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 4 tgcagccaaggatgacttgccg 25
||||||||||||||||||||||
Sbjct: 19 tgcagccaaggatgacttgccg 40
>54809_vvi-miR169g:pmrd
Length = 121
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 4 tgcagccaaggatgacttgccg 25
||||||||||||||||||||||
Sbjct: 11 tgcagccaaggatgacttgccg 32
>54808_vvi-miR169f:pmrd
Length = 184
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 4 tgcagccaaggatgacttgccg 25
||||||||||||||||||||||
Sbjct: 11 tgcagccaaggatgacttgccg 32
>54549_sly-miR169c:pmrd
Length = 147
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 4 tgcagccaaggatgacttgccg 25
||||||||||||||||||||||
Sbjct: 39 tgcagccaaggatgacttgccg 60
>54447_sbi-miR169k:pmrd
Length = 97
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 cagccaaggatgacttgccggc 27
||||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccggc 22
>54091_ptc-miRf12269-akr:pmrd
Length = 122
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 cagccaaggatgacttgccggc 27
||||||||||||||||||||||
Sbjct: 111 cagccaaggatgacttgccggc 90
>52526_ptc-miRf10704-akr:pmrd
Length = 120
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 cagccaaggatgacttgccggc 27
||||||||||||||||||||||
Sbjct: 110 cagccaaggatgacttgccggc 89
>51676_ptc-miR169s:pmrd
Length = 120
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 cagccaaggatgacttgccggc 27
||||||||||||||||||||||
Sbjct: 12 cagccaaggatgacttgccggc 33
>51665_ptc-miR169h:pmrd
Length = 118
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 cagccaaggatgacttgccggc 27
||||||||||||||||||||||
Sbjct: 11 cagccaaggatgacttgccggc 32
>48876_osa-miR169a:pmrd
Length = 173
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 4 tgcagccaaggatgacttgccg 25
||||||||||||||||||||||
Sbjct: 36 tgcagccaaggatgacttgccg 57
>48639_gso-miR169a:pmrd
Length = 103
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 cagccaaggatgacttgccggc 27
||||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccggc 22
>48564_gma-miR169p:pmrd
Length = 111
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 cagccaaggatgacttgccggc 27
||||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccggc 22
>48562_gma-miR169b:pmrd
Length = 183
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 4 tgcagccaaggatgacttgccg 25
||||||||||||||||||||||
Sbjct: 9 tgcagccaaggatgacttgccg 30
>48351_bna-miR169b:pmrd
Length = 188
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 4 tgcagccaaggatgacttgccg 25
||||||||||||||||||||||
Sbjct: 16 tgcagccaaggatgacttgccg 37
>48350_bna-miR169a:pmrd
Length = 132
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 4 tgcagccaaggatgacttgccg 25
||||||||||||||||||||||
Sbjct: 17 tgcagccaaggatgacttgccg 38
>46960_ath-miR169a:pmrd
Length = 226
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 4 tgcagccaaggatgacttgccg 25
||||||||||||||||||||||
Sbjct: 16 tgcagccaaggatgacttgccg 37
>55019_zma-miR169q:pmrd
Length = 69
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 7 agccaaggatgacttgccggc 27
|||||||||||||||||||||
Sbjct: 6 agccaaggatgacttgccggc 26
>55018_zma-miR169p:pmrd
Length = 131
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 7 agccaaggatgacttgccggc 27
|||||||||||||||||||||
Sbjct: 4 agccaaggatgacttgccggc 24
>55017_zma-miR169o:pmrd
Length = 145
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2 tatgcagccaaggatgacttgccgg 26
|||| ||||||||||||||||||||
Sbjct: 120 tatgtagccaaggatgacttgccgg 144
>55016_zma-miR169n:pmrd
Length = 191
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 7 agccaaggatgacttgccggc 27
|||||||||||||||||||||
Sbjct: 3 agccaaggatgacttgccggc 23
>54819_vvi-miR169q:pmrd
Length = 97
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 7 agccaaggatgacttgccggc 27
|||||||||||||||||||||
Sbjct: 13 agccaaggatgacttgccggc 33
>54818_vvi-miR169p:pmrd
Length = 102
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 7 agccaaggatgacttgccggc 27
|||||||||||||||||||||
Sbjct: 13 agccaaggatgacttgccggc 33
>54816_vvi-miR169n:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 7 agccaaggatgacttgccggc 27
|||||||||||||||||||||
Sbjct: 13 agccaaggatgacttgccggc 33
>54815_vvi-miR169m:pmrd
Length = 102
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 7 agccaaggatgacttgccggc 27
|||||||||||||||||||||
Sbjct: 13 agccaaggatgacttgccggc 33
>54638_sof-miR169:pmrd
Length = 143
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 7 agccaaggatgacttgccggc 27
|||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccggc 22
>54446_sbi-miR169j:pmrd
Length = 123
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 7 agccaaggatgacttgccggc 27
|||||||||||||||||||||
Sbjct: 4 agccaaggatgacttgccggc 24
>54438_sbi-miR169b:pmrd
Length = 102
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 cagccaaggatgacttgccgg 26
|||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccgg 21
>48880_osa-miR169e:pmrd
Length = 132
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 7 agccaaggatgacttgccggc 27
|||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgccggc 32
>48640_gso-miR169g*:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 7 agccaaggatgacttgccggc 27
|||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccggc 21
>46962_ath-miR169c:pmrd
Length = 411
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 cagccaaggatgacttgccgg 26
|||||||||||||||||||||
Sbjct: 113 cagccaaggatgacttgccgg 133
>55023_zma-miR169u:pmrd
Length = 90
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 6 cagccaaggatgacttgccg 25
||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccg 20
>55022_zma-miR169t:pmrd
Length = 116
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 6 cagccaaggatgacttgccg 25
||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccg 20
>55021_zma-miR169s:pmrd
Length = 150
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 6 cagccaaggatgacttgccg 25
||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccg 20
>54437_sbi-miR169a:pmrd
Length = 91
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 6 cagccaaggatgacttgccg 25
||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccg 20
>54367_ptr-miR169a:pmrd
Length = 101
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 6 cagccaaggatgacttgccg 25
||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccg 20
>48719_mtr-miR169c:pmrd
Length = 82
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 6 cagccaaggatgacttgccg 25
||||||||||||||||||||
Sbjct: 82 cagccaaggatgacttgccg 63
>48310_bdi-miR169b:pmrd
Length = 106
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 7 agccaaggatgacttgccgg 26
||||||||||||||||||||
Sbjct: 20 agccaaggatgacttgccgg 39
>48239_ath-miRf11139-akr:pmrd
Length = 119
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 7 agccaaggatgacttgccgg 26
||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgccgg 41
>46967_ath-miR169g:pmrd
Length = 379
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 7 agccaaggatgacttgccgg 26
||||||||||||||||||||
Sbjct: 146 agccaaggatgacttgccgg 165
>46966_ath-miR169g:pmrd
Length = 379
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 7 agccaaggatgacttgccgg 26
||||||||||||||||||||
Sbjct: 146 agccaaggatgacttgccgg 165
>46965_ath-miR169f:pmrd
Length = 167
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 7 agccaaggatgacttgccgg 26
||||||||||||||||||||
Sbjct: 34 agccaaggatgacttgccgg 53
