miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48739_mtr-miR395h:pmrd
Length = 101
Score = 200 bits (101), Expect = 1e-52
Identities = 101/101 (100%)
Strand = Plus / Plus
Query: 1 gactttctctgaacacttcatacaagaggttatccatctaatctaaaagtcattagatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gactttctctgaacacttcatacaagaggttatccatctaatctaaaagtcattagatat 60
Query: 61 ttacgatgggtcgttcttcaatgaagtgtttgggggaactt 101
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttacgatgggtcgttcttcaatgaagtgtttgggggaactt 101
>48738_mtr-miR395g:pmrd
Length = 63
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 7 ctctgaacacttcatacaagaggttatccatct 39
|||||||| ||||||| ||||||||||||||||
Sbjct: 7 ctctgaacgcttcatataagaggttatccatct 39
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 75 tcttcaatgaagtgtttgggggaact 100
|||||| |||||||||||||||||||
Sbjct: 37 tcttcattgaagtgtttgggggaact 62
>48745_mtr-miR395n:pmrd
Length = 101
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 77 ttcaatgaagtgtttgggggaact 100
||||||||||||||||||||||||
Sbjct: 77 ttcaatgaagtgtttgggggaact 100
>48743_mtr-miR395l:pmrd
Length = 101
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 77 ttcaatgaagtgtttgggggaact 100
||||||||||||||||||||||||
Sbjct: 77 ttcaatgaagtgtttgggggaact 100
>48741_mtr-miR395j:pmrd
Length = 76
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 77 ttcaatgaagtgtttgggggaact 100
||||||||||||||||||||||||
Sbjct: 52 ttcaatgaagtgtttgggggaact 75
>48740_mtr-miR395i:pmrd
Length = 76
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 77 ttcaatgaagtgtttgggggaact 100
||||||||||||||||||||||||
Sbjct: 52 ttcaatgaagtgtttgggggaact 75
>48744_mtr-miR395m:pmrd
Length = 100
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 74 ttcttcaatgaagtgtttgggggaact 100
||||| |||||||||||||||||||||
Sbjct: 73 ttcttaaatgaagtgtttgggggaact 99
>48742_mtr-miR395k:pmrd
Length = 98
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 74 ttcttcaatgaagtgtttgggggaact 100
|||||| ||||||||||||||||||||
Sbjct: 71 ttcttctatgaagtgtttgggggaact 97
>48737_mtr-miR395f:pmrd
Length = 98
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 74 ttcttcaatgaagtgtttgggggaact 100
|||||| ||||||||||||||||||||
Sbjct: 71 ttcttctatgaagtgtttgggggaact 97
>48736_mtr-miR395e:pmrd
Length = 100
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 74 ttcttcaatgaagtgtttgggggaact 100
||||| |||||||||||||||||||||
Sbjct: 73 ttcttaaatgaagtgtttgggggaact 99
>48735_mtr-miR395d:pmrd
Length = 95
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 74 ttcttcaatgaagtgtttgggggaact 100
||||| |||||||||||||||||||||
Sbjct: 68 ttcttaaatgaagtgtttgggggaact 94
>48734_mtr-miR395c:pmrd
Length = 97
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 74 ttcttcaatgaagtgtttgggggaact 100
|||||| ||||||||||||||||||||
Sbjct: 70 ttcttctatgaagtgtttgggggaact 96
>48732_mtr-miR395a:pmrd
Length = 135
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 78 tcaatgaagtgtttgggggaact 100
|||||||||||||||||||||||
Sbjct: 93 tcaatgaagtgtttgggggaact 115
>54478_sbi-miR395f:pmrd
Length = 122
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 atgaagtgtttgggggaact 100
||||||||||||||||||||
Sbjct: 83 atgaagtgtttgggggaact 102
>48746_mtr-miR395o:pmrd
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 atgaagtgtttgggggaact 100
||||||||||||||||||||
Sbjct: 63 atgaagtgtttgggggaact 82
>48733_mtr-miR395b:pmrd
Length = 124
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 77 ttcaatgaagtgtttgggggaact 100
||||||||||| ||||||||||||
Sbjct: 81 ttcaatgaagtatttgggggaact 104
>48577_gma-miR395:pmrd
Length = 67
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 atgaagtgtttgggggaact 100
||||||||||||||||||||
Sbjct: 47 atgaagtgtttgggggaact 66
>48503_ghr-miR395a:pmrd
Length = 186
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 82 tgaagtgtttgggggaactt 101
||||||||||||||||||||
Sbjct: 167 tgaagtgtttgggggaactt 186
