miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>48752_mtr-miR399c:pmrd
          Length = 119

 Score = 67.9 bits (34), Expect = 1e-12
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                             
Query: 57  ttctggtttgccaaaggagatttgccctgccatt 90
           ||||||||||||||||||||||||||||||||||
Sbjct: 72  ttctggtttgccaaaggagatttgccctgccatt 105




>54884_vvi-miR399h:pmrd
          Length = 90

 Score = 63.9 bits (32), Expect = 2e-11
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                      
Query: 47 acatgcatgcttctggtttgccaaaggagatttgccctgccatt 90
          |||||||| |||||| |||||||||||||| |||||||||||||
Sbjct: 42 acatgcatacttctgttttgccaaaggagaattgccctgccatt 85




>48758_mtr-miR399j:pmrd
          Length = 84

 Score = 61.9 bits (31), Expect = 7e-11
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                             
Query: 35 tagaaagcttggacatgcatgcttctggtttgccaaaggagatttgccctg 85
          |||| |||||| |||||| ||||||| ||||||||||| ||||||||||||
Sbjct: 34 tagagagcttgaacatgcttgcttctagtttgccaaagaagatttgccctg 84




>52804_ptc-miRf10982-akr:pmrd
          Length = 94

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                            
Query: 57 ttctggtttgccaaaggagatttgccctgccatt 90
          ||||| |||||||||||||| |||||||||||||
Sbjct: 35 ttctgttttgccaaaggagaattgccctgccatt 2




>51752_ptc-miR399f:pmrd
          Length = 101

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                            
Query: 57 ttctggtttgccaaaggagatttgccctgccatt 90
          ||||| |||||||||||||| |||||||||||||
Sbjct: 64 ttctgttttgccaaaggagaattgccctgccatt 97




>55091_zma-miR399a:pmrd
          Length = 123

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 64  ttgccaaaggagatttgccctgccatt 90
           ||||||||||||| |||||||||||||
Sbjct: 83  ttgccaaaggagaattgccctgccatt 109




>48513_ghr-miR399b:pmrd
          Length = 77

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 63 tttgccaaaggagatttgccctg 85
          |||||||||||||||||||||||
Sbjct: 55 tttgccaaaggagatttgccctg 77




>54496_sbi-miR399h:pmrd
          Length = 132

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 65  tgccaaaggagatttgccctgccatt 90
           |||||||||||| |||||||||||||
Sbjct: 93  tgccaaaggagaattgccctgccatt 118




>53710_ptc-miRf11888-akr:pmrd
          Length = 89

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                    
Query: 65 tgccaaaggagatttgccctgccatt 90
          |||||||||||| |||||||||||||
Sbjct: 28 tgccaaaggagaattgccctgccatt 3




>51753_ptc-miR399g:pmrd
          Length = 94

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 65 tgccaaaggagatttgccctgccatt 90
          |||||||||||| |||||||||||||
Sbjct: 65 tgccaaaggagaattgccctgccatt 90




>50193_osa-miRf10978-akr:pmrd
          Length = 105

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 65  tgccaaaggagatttgccctgccatt 90
           |||||||||||| |||||||||||||
Sbjct: 79  tgccaaaggagaattgccctgccatt 104




>48965_osa-miR399b:pmrd
          Length = 97

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 65 tgccaaaggagatttgccctgccatt 90
          |||||||||||| |||||||||||||
Sbjct: 67 tgccaaaggagaattgccctgccatt 92




>47015_ath-miR399a:pmrd
          Length = 123

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 65  tgccaaaggagatttgccctg 85
           |||||||||||||||||||||
Sbjct: 93  tgccaaaggagatttgccctg 113




>54498_sbi-miR399j:pmrd
          Length = 93

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 64 ttgccaaaggagatttgccctgcc 87
          ||||||||||||| ||||||||||
Sbjct: 70 ttgccaaaggagaattgccctgcc 93