miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>48753_mtr-miR399d:pmrd
          Length = 129

 Score = 75.8 bits (38), Expect = 4e-15
 Identities = 41/42 (97%)
 Strand = Plus / Plus

                                                    
Query: 1  agtcatagggcatgtctctattggcaggtgatatagtgatat 42
          |||||||||||||||||||||||||||||||||| |||||||
Sbjct: 16 agtcatagggcatgtctctattggcaggtgatatggtgatat 57




>48751_mtr-miR399b:pmrd
          Length = 112

 Score = 63.9 bits (32), Expect = 2e-11
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                  
Query: 3  tcatagggcatgtctctattggcaggtgatatagtgatat 42
          |||||||||||||||||||||| ||||||||| |||||||
Sbjct: 1  tcatagggcatgtctctattggtaggtgatatggtgatat 40



 Score = 61.9 bits (31), Expect = 7e-11
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                         
Query: 49 agaaattcacttgccaaaggagagctgccct 79
          |||||||||||||||||||||||||||||||
Sbjct: 62 agaaattcacttgccaaaggagagctgccct 92




>51755_ptc-miR399i:pmrd
          Length = 108

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 58  cttgccaaaggagagctgccctatga 83
           ||||||||||||||| ||||||||||
Sbjct: 77  cttgccaaaggagagttgccctatga 102




>47017_ath-miR399c:pmrd
          Length = 114

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 55  tcacttgccaaaggagagctgccct 79
           |||||||||||||||||| ||||||
Sbjct: 79  tcacttgccaaaggagagttgccct 103




>55100_zma-miR399j:pmrd
          Length = 91

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 60 tgccaaaggagagctgccct 79
          ||||||||||||||||||||
Sbjct: 71 tgccaaaggagagctgccct 90




>55094_zma-miR399d:pmrd
          Length = 125

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 60  tgccaaaggagagctgccct 79
           ||||||||||||||||||||
Sbjct: 86  tgccaaaggagagctgccct 105




>54490_sbi-miR399b:pmrd
          Length = 123

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 60  tgccaaaggagagctgccct 79
           ||||||||||||||||||||
Sbjct: 84  tgccaaaggagagctgccct 103




>48972_osa-miR399i:pmrd
          Length = 116

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 60  tgccaaaggagagctgccct 79
           ||||||||||||||||||||
Sbjct: 86  tgccaaaggagagctgccct 105




>46891_aqc-miR399:pmrd
          Length = 98

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 60 tgccaaaggagagctgccctatga 83
          ||||||||||||| ||||||||||
Sbjct: 72 tgccaaaggagagttgccctatga 95




>54878_vvi-miR399b:pmrd
          Length = 117

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 57  acttgccaaaggagagctgccct 79
           |||||||||||||||| ||||||
Sbjct: 84  acttgccaaaggagagttgccct 106