miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48753_mtr-miR399d:pmrd
Length = 129
Score = 190 bits (96), Expect = 1e-49
Identities = 99/100 (99%)
Strand = Plus / Plus
Query: 1 agtcatagggcatgtctctattggcaggtgatatggtgatatttcatttgactttaaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16 agtcatagggcatgtctctattggcaggtgatatggtgatatttcatttgactttaaggc 75
Query: 61 tctagaaattcacttgccaaaggagagctgccctacgagt 100
|||| |||||||||||||||||||||||||||||||||||
Sbjct: 76 tctaaaaattcacttgccaaaggagagctgccctacgagt 115
>48751_mtr-miR399b:pmrd
Length = 112
Score = 135 bits (68), Expect = 7e-33
Identities = 86/92 (93%)
Strand = Plus / Plus
Query: 3 tcatagggcatgtctctattggcaggtgatatggtgatatttcatttgactttaaggctc 62
|||||||||||||||||||||| |||||||||||||||||||||||||| || |||||
Sbjct: 1 tcatagggcatgtctctattggtaggtgatatggtgatatttcatttgaattagaggctt 60
Query: 63 tagaaattcacttgccaaaggagagctgccct 94
|||||||||||||||||||||||||||||||
Sbjct: 61 cagaaattcacttgccaaaggagagctgccct 92
>47017_ath-miR399c:pmrd
Length = 114
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 70 tcacttgccaaaggagagctgccct 94
|||||||||||||||||| ||||||
Sbjct: 79 tcacttgccaaaggagagttgccct 103
>55100_zma-miR399j:pmrd
Length = 91
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 75 tgccaaaggagagctgccct 94
||||||||||||||||||||
Sbjct: 71 tgccaaaggagagctgccct 90
>55094_zma-miR399d:pmrd
Length = 125
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 75 tgccaaaggagagctgccct 94
||||||||||||||||||||
Sbjct: 86 tgccaaaggagagctgccct 105
>54490_sbi-miR399b:pmrd
Length = 123
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 75 tgccaaaggagagctgccct 94
||||||||||||||||||||
Sbjct: 84 tgccaaaggagagctgccct 103
>48972_osa-miR399i:pmrd
Length = 116
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 75 tgccaaaggagagctgccct 94
||||||||||||||||||||
Sbjct: 86 tgccaaaggagagctgccct 105
