miRNEST 2.0, an integrative microRNA resource :: BLAST
>48753_mtr-miR399d:pmrd
Length = 129
Score = 109 bits (55), Expect = 3e-25
Identities = 88/100 (88%), Gaps = 8/100 (8%)
Strand = Plus / Plus
Query: 1 agtcatagggcatgtctctattggcaggtg--------atatttcatttgacttagaggc 52
|||||||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 16 agtcatagggcatgtctctattggcaggtgatatggtgatatttcatttgactttaaggc 75
Query: 53 tctagaaattcacttgccaaaggagagctgccctgcgagt 92
|||| ||||||||||||||||||||||||||||| |||||
Sbjct: 76 tctaaaaattcacttgccaaaggagagctgccctacgagt 115
>48751_mtr-miR399b:pmrd
Length = 112
Score = 99.6 bits (50), Expect = 3e-22
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 27 ggtgatatttcatttgacttagaggctctagaaattcacttgccaaaggagagctgccct 86
||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 33 ggtgatatttcatttgaattagaggcttcagaaattcacttgccaaaggagagctgccct 92
Query: 87 gcgagt 92
| ||||
Sbjct: 93 gtgagt 98
>55094_zma-miR399d:pmrd
Length = 125
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 67 tgccaaaggagagctgccctgc 88
||||||||||||||||||||||
Sbjct: 86 tgccaaaggagagctgccctgc 107
>54490_sbi-miR399b:pmrd
Length = 123
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 67 tgccaaaggagagctgccctgc 88
||||||||||||||||||||||
Sbjct: 84 tgccaaaggagagctgccctgc 105
>48972_osa-miR399i:pmrd
Length = 116
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 67 tgccaaaggagagctgccctgc 88
||||||||||||||||||||||
Sbjct: 86 tgccaaaggagagctgccctgc 107
>47017_ath-miR399c:pmrd
Length = 114
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 62 tcacttgccaaaggagagctgccctg 87
|||||||||||||||||| |||||||
Sbjct: 79 tcacttgccaaaggagagttgccctg 104
>55100_zma-miR399j:pmrd
Length = 91
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 tgccaaaggagagctgccctg 87
|||||||||||||||||||||
Sbjct: 71 tgccaaaggagagctgccctg 91
>54878_vvi-miR399b:pmrd
Length = 117
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 64 acttgccaaaggagagctgccctg 87
|||||||||||||||| |||||||
Sbjct: 84 acttgccaaaggagagttgccctg 107
>54492_sbi-miR399d:pmrd
Length = 205
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 67 tgccaaaggagagctgccctgcga 90
||||||||||||| ||||||||||
Sbjct: 166 tgccaaaggagagttgccctgcga 189
>48967_osa-miR399d:pmrd
Length = 286
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 67 tgccaaaggagagctgccctgcga 90
||||||||||||| ||||||||||
Sbjct: 256 tgccaaaggagagttgccctgcga 279