miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48763_mtr-miR1507:pmrd
Length = 144
Score = 285 bits (144), Expect = 4e-78
Identities = 144/144 (100%)
Strand = Plus / Plus
Query: 1 accataaactccaattaatgtggtgttgagtagagttgtatggaacgaaagatgggaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 accataaactccaattaatgtggtgttgagtagagttgtatggaacgaaagatgggaatt 60
Query: 61 tcttgttgaattctattcattcaattttccctccctcgttccatacatcatctagccaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcttgttgaattctattcattcaattttccctccctcgttccatacatcatctagccaat 120
Query: 121 actgtgttaacaattgtctttggt 144
||||||||||||||||||||||||
Sbjct: 121 actgtgttaacaattgtctttggt 144
>48762_mtr-miR1507:pmrd
Length = 144
Score = 285 bits (144), Expect = 4e-78
Identities = 144/144 (100%)
Strand = Plus / Plus
Query: 1 accataaactccaattaatgtggtgttgagtagagttgtatggaacgaaagatgggaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 accataaactccaattaatgtggtgttgagtagagttgtatggaacgaaagatgggaatt 60
Query: 61 tcttgttgaattctattcattcaattttccctccctcgttccatacatcatctagccaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcttgttgaattctattcattcaattttccctccctcgttccatacatcatctagccaat 120
Query: 121 actgtgttaacaattgtctttggt 144
||||||||||||||||||||||||
Sbjct: 121 actgtgttaacaattgtctttggt 144
>46858_ahy-miR1507:pmrd
Length = 135
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 87 ttccctccctcgttccatacatcatcta 114
||||||||||||||||||||||||||||
Sbjct: 86 ttccctccctcgttccatacatcatcta 113
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 30 gtagagttgtatggaacgaaagatgggaa 58
|||||| |||||||||||| |||||||||
Sbjct: 21 gtagagatgtatggaacgagagatgggaa 49
