miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>48771_mtr-miR2086:pmrd
          Length = 102

 Score =  202 bits (102), Expect = 4e-53
 Identities = 102/102 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttcaccaactttccagttctgcgttcatgtcccctgcagcttgactttaggggaaatcga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ttcaccaactttccagttctgcgttcatgtcccctgcagcttgactttaggggaaatcga 60

                                                     
Query: 61  gcaacaagggacatgaatgcagaactggaaagatggtctgag 102
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gcaacaagggacatgaatgcagaactggaaagatggtctgag 102



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                        
Query: 68 gggacatgaatgcagaactggaaagatggt 97
          |||||||||| |||||||||||||| ||||
Sbjct: 33 gggacatgaacgcagaactggaaagttggt 4



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                        
Query: 4  accaactttccagttctgcgttcatgtccc 33
          |||| |||||||||||||| ||||||||||
Sbjct: 97 accatctttccagttctgcattcatgtccc 68




>48770_mtr-miR2086:pmrd
          Length = 102

 Score =  202 bits (102), Expect = 4e-53
 Identities = 102/102 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttcaccaactttccagttctgcgttcatgtcccctgcagcttgactttaggggaaatcga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ttcaccaactttccagttctgcgttcatgtcccctgcagcttgactttaggggaaatcga 60

                                                     
Query: 61  gcaacaagggacatgaatgcagaactggaaagatggtctgag 102
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gcaacaagggacatgaatgcagaactggaaagatggtctgag 102



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                        
Query: 68 gggacatgaatgcagaactggaaagatggt 97
          |||||||||| |||||||||||||| ||||
Sbjct: 33 gggacatgaacgcagaactggaaagttggt 4



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                        
Query: 4  accaactttccagttctgcgttcatgtccc 33
          |||| |||||||||||||| ||||||||||
Sbjct: 97 accatctttccagttctgcattcatgtccc 68