miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48777_mtr-miR2089:pmrd
Length = 163
Score = 323 bits (163), Expect = 2e-89
Identities = 163/163 (100%)
Strand = Plus / Plus
Query: 1 gcaggcaaccaagcattcaagatctagagcaagatttattttacctattccaccaattcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcaggcaaccaagcattcaagatctagagcaagatttattttacctattccaccaattcc 60
Query: 61 attgatcctggtttcaagatctgaaagtgaatctgggatgtataggattggtgtaatagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attgatcctggtttcaagatctgaaagtgaatctgggatgtataggattggtgtaatagg 120
Query: 121 taaaacaacacttgcactagaagcaaaatatatatttgtttgc 163
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 taaaacaacacttgcactagaagcaaaatatatatttgtttgc 163
>48776_mtr-miR2089:pmrd
Length = 163
Score = 323 bits (163), Expect = 2e-89
Identities = 163/163 (100%)
Strand = Plus / Plus
Query: 1 gcaggcaaccaagcattcaagatctagagcaagatttattttacctattccaccaattcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcaggcaaccaagcattcaagatctagagcaagatttattttacctattccaccaattcc 60
Query: 61 attgatcctggtttcaagatctgaaagtgaatctgggatgtataggattggtgtaatagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attgatcctggtttcaagatctgaaagtgaatctgggatgtataggattggtgtaatagg 120
Query: 121 taaaacaacacttgcactagaagcaaaatatatatttgtttgc 163
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 taaaacaacacttgcactagaagcaaaatatatatttgtttgc 163
>48593_gma-miR1510b:pmrd
Length = 94
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 39 ttttacctattccaccaattccat 62
||||||||||||||||||||||||
Sbjct: 68 ttttacctattccaccaattccat 91
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 107 attggtgtaataggtaaaacaaca 130
||||||| ||||||||||||||||
Sbjct: 86 attggtggaataggtaaaacaaca 63
>48592_gma-miR1510a:pmrd
Length = 93
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 39 ttttacctattccaccaattccat 62
|||||||||||||||| |||||||
Sbjct: 67 ttttacctattccacccattccat 90
