miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>55083_zma-miR396l:pmrd
          Length = 97

 Score = 56.0 bits (28), Expect = 5e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                      
Query: 1  ttccacagctttcttgaactgcatctct 28
          ||||||||||||||||||||||||||||
Sbjct: 1  ttccacagctttcttgaactgcatctct 28




>55073_zma-miR396b:pmrd
          Length = 136

 Score = 56.0 bits (28), Expect = 5e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                      
Query: 1  ttccacagctttcttgaactgcatctct 28
          ||||||||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcatctct 48




>54645_sof-miR396:pmrd
          Length = 134

 Score = 56.0 bits (28), Expect = 5e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                      
Query: 1  ttccacagctttcttgaactgcatctct 28
          ||||||||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcatctct 48




>54486_sbi-miR396b:pmrd
          Length = 128

 Score = 56.0 bits (28), Expect = 5e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                      
Query: 1  ttccacagctttcttgaactgcatctct 28
          ||||||||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcatctct 48




>48110_ath-miRf11010-akr:pmrd
          Length = 165

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 74  gatttgcggttcaataaagctgtggga 100
           |||||||||||||||||||||||||||
Sbjct: 122 gatttgcggttcaataaagctgtggga 148



 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 1  ttccacagctttcttgaactgca 23
          |||||||||||||||||||||||
Sbjct: 18 ttccacagctttcttgaactgca 40




>47008_ath-miR396a:pmrd
          Length = 151

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 74  gatttgcggttcaataaagctgtggga 100
           |||||||||||||||||||||||||||
Sbjct: 115 gatttgcggttcaataaagctgtggga 141



 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 1  ttccacagctttcttgaactgca 23
          |||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgca 33




>52079_ptc-miRf10257-akr:pmrd
          Length = 130

 Score = 52.0 bits (26), Expect = 8e-08
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                            
Query: 1  ttccacagctttcttgaactgcatctcttagatt 34
          ||||||||||||||||||||||| || |||||||
Sbjct: 9  ttccacagctttcttgaactgcacctattagatt 42



 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 78  tgcggttcaataaagctgtggga 100
           |||||||||||||||||||||||
Sbjct: 100 tgcggttcaataaagctgtggga 122




>51735_ptc-miR396b:pmrd
          Length = 132

 Score = 52.0 bits (26), Expect = 8e-08
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                            
Query: 1  ttccacagctttcttgaactgcatctcttagatt 34
          ||||||||||||||||||||||| || |||||||
Sbjct: 11 ttccacagctttcttgaactgcacctattagatt 44



 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 78  tgcggttcaataaagctgtggga 100
           |||||||||||||||||||||||
Sbjct: 102 tgcggttcaataaagctgtggga 124




>48946_osa-miR396b:pmrd
          Length = 116

 Score = 52.0 bits (26), Expect = 8e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 1  ttccacagctttcttgaactgcatct 26
          ||||||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgcatct 36




>55079_zma-miR396h:pmrd
          Length = 116

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 1  ttccacagctttcttgaactgcatc 25
          |||||||||||||||||||||||||
Sbjct: 4  ttccacagctttcttgaactgcatc 28




>48680_lja-miR396:pmrd
          Length = 108

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 76  tttgcggttcaataaagctgtggga 100
           |||||||||||||||||||||||||
Sbjct: 70  tttgcggttcaataaagctgtggga 94



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  ttccacagctttcttgaactgcat 24
          ||||||||||||||||||||||||
Sbjct: 16 ttccacagctttcttgaactgcat 39




>48578_gma-miR396a:pmrd
          Length = 140

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 1  ttccacagctttcttgaactgcatc 25
          |||||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcatc 45



 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 76  tttgcggttcaataaagctgtggga 100
           |||||||||||||||||||||||||
Sbjct: 97  tttgcggttcaataaagctgtggga 121




>48486_gcl-miR396b:pmrd
          Length = 101

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 76  tttgcggttcaataaagctgtggga 100
           |||||||||||||||||||||||||
Sbjct: 77  tttgcggttcaataaagctgtggga 101



 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 1  ttccacagctttcttgaactgcatc 25
          ||||| |||||||||||||||||||
Sbjct: 1  ttccatagctttcttgaactgcatc 25




>48485_gcl-miR396a:pmrd
          Length = 101

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 76  tttgcggttcaataaagctgtggga 100
           |||||||||||||||||||||||||
Sbjct: 25  tttgcggttcaataaagctgtggga 1



 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 1   ttccacagctttcttgaactgcatc 25
           |||||||||||||||||||||||||
Sbjct: 101 ttccacagctttcttgaactgcatc 77




>46887_aqc-miR396a:pmrd
          Length = 122

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 76  tttgcggttcaataaagctgtggga 100
           |||||||||||||||||||||||||
Sbjct: 96  tttgcggttcaataaagctgtggga 120



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  ttccacagctttcttgaactgcat 24
          ||||||||||||||||||||||||
Sbjct: 1  ttccacagctttcttgaactgcat 24




>55081_zma-miR396j:pmrd
          Length = 98

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  ttccacagctttcttgaactgcat 24
          ||||||||||||||||||||||||
Sbjct: 1  ttccacagctttcttgaactgcat 24




>55080_zma-miR396i:pmrd
          Length = 103

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  ttccacagctttcttgaactgcat 24
          ||||||||||||||||||||||||
Sbjct: 1  ttccacagctttcttgaactgcat 24




>55074_zma-miR396c:pmrd
          Length = 104

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  ttccacagctttcttgaactgcat 24
          ||||||||||||||||||||||||
Sbjct: 4  ttccacagctttcttgaactgcat 27




>55072_zma-miR396a:pmrd
          Length = 137

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  ttccacagctttcttgaactgcat 24
          ||||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcat 44




>54871_vvi-miR396d:pmrd
          Length = 120

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  ttccacagctttcttgaactgcat 24
          ||||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgcat 34



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 77  ttgcggttcaataaagctgtggga 100
           ||||||||||||||||||||||||
Sbjct: 85  ttgcggttcaataaagctgtggga 108




>54485_sbi-miR396a:pmrd
          Length = 125

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  ttccacagctttcttgaactgcat 24
          ||||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcat 44




>51734_ptc-miR396a:pmrd
          Length = 123

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 77  ttgcggttcaataaagctgtggga 100
           ||||||||||||||||||||||||
Sbjct: 92  ttgcggttcaataaagctgtggga 115



 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 1  ttccacagctttcttgaactgca 23
          |||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgca 33




>48508_ghr-miR396c:pmrd
          Length = 115

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 77  ttgcggttcaataaagctgtggga 100
           ||||||||||||||||||||||||
Sbjct: 92  ttgcggttcaataaagctgtggga 115



 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 1  ttccacagctttcttgaactgca 23
          |||||||||||||||||||||||
Sbjct: 1  ttccacagctttcttgaactgca 23




>48507_ghr-miR396b:pmrd
          Length = 115

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 77  ttgcggttcaataaagctgtggga 100
           ||||||||||||||||||||||||
Sbjct: 92  ttgcggttcaataaagctgtggga 115



 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 1  ttccacagctttcttgaactgca 23
          |||||||||||||||||||||||
Sbjct: 1  ttccacagctttcttgaactgca 23




>48945_osa-miR396a:pmrd
          Length = 154

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 1  ttccacagctttcttgaactgca 23
          |||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgca 33




>55082_zma-miR396k:pmrd
          Length = 98

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  ttccacagctttcttgaactgc 22
          ||||||||||||||||||||||
Sbjct: 1  ttccacagctttcttgaactgc 22




>54870_vvi-miR396c:pmrd
          Length = 108

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  ttccacagctttcttgaactg 21
          |||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactg 31




>55078_zma-miR396g:pmrd
          Length = 117

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 3  ttccacagctttcttgaact 22




>55077_zma-miR396f:pmrd
          Length = 166

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 3  ttccacagctttcttgaact 22




>54869_vvi-miR396b:pmrd
          Length = 108

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 14 ttccacagctttcttgaact 33




>54868_vvi-miR396a:pmrd
          Length = 116

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 14 ttccacagctttcttgaact 33




>54487_sbi-miR396c:pmrd
          Length = 162

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40




>53179_ptc-miRf11357-akr:pmrd
          Length = 141

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 1   ttccacagctttcttgaact 20
           ||||||||||||||||||||
Sbjct: 134 ttccacagctttcttgaact 115




>52893_ptc-miRf11071-akr:pmrd
          Length = 148

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 1   ttccacagctttcttgaact 20
           ||||||||||||||||||||
Sbjct: 142 ttccacagctttcttgaact 123




>52304_ptc-miRf10482-akr:pmrd
          Length = 102

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 93 ttccacagctttcttgaact 74




>52080_ptc-miRf10258-akr:pmrd
          Length = 141

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 1   ttccacagctttcttgaact 20
           ||||||||||||||||||||
Sbjct: 134 ttccacagctttcttgaact 115




>51738_ptc-miR396e:pmrd
          Length = 145

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30




>51737_ptc-miR396d:pmrd
          Length = 154

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30




>51736_ptc-miR396c:pmrd
          Length = 102

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30




>51564_pta-miR396:pmrd
          Length = 119

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 17 ttccacagctttcttgaact 36




>48947_osa-miR396c:pmrd
          Length = 141

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30




>48748_mtr-miR396a:pmrd
          Length = 93

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 6  ttccacagctttcttgaact 25




>48580_gma-miR396c:pmrd
          Length = 117

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40




>48579_gma-miR396b:pmrd
          Length = 126

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40




>48374_bna-miR396a:pmrd
          Length = 117

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 1  ttccacagctttcttgaact 20




>47009_ath-miR396b:pmrd
          Length = 135

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30




>46888_aqc-miR396b:pmrd
          Length = 89

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 1  ttccacagctttcttgaact 20