miRNEST 2.0, an integrative microRNA resource :: BLAST
>46887_aqc-miR396a:pmrd
Length = 122
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgcatggt 27
|||||||||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcatggt 27
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 49 ctttgctgttcaataaagctgtggga 74
|||||| |||||||||||||||||||
Sbjct: 95 ctttgcggttcaataaagctgtggga 120
>55081_zma-miR396j:pmrd
Length = 98
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgcatg 25
|||||||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcatg 25
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 56 gttcaataaagctgtggga 74
|||||||||||||||||||
Sbjct: 80 gttcaataaagctgtggga 98
>55080_zma-miR396i:pmrd
Length = 103
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgcatg 25
|||||||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcatg 25
>55074_zma-miR396c:pmrd
Length = 104
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgcatg 25
|||||||||||||||||||||||||
Sbjct: 4 ttccacagctttcttgaactgcatg 28
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 56 gttcaataaagctgtggga 74
|||||||||||||||||||
Sbjct: 83 gttcaataaagctgtggga 101
>55072_zma-miR396a:pmrd
Length = 137
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgcatg 25
|||||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcatg 45
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 56 gttcaataaagctgtggga 74
|||||||||||||||||||
Sbjct: 100 gttcaataaagctgtggga 118
>54485_sbi-miR396a:pmrd
Length = 125
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgcatg 25
|||||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcatg 45
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 56 gttcaataaagctgtggga 74
|||||||||||||||||||
Sbjct: 88 gttcaataaagctgtggga 106
>55083_zma-miR396l:pmrd
Length = 97
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgcat 24
||||||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcat 24
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 3 ccacagctttcttgaactgcatg 25
|||||||||| ||||||||||||
Sbjct: 95 ccacagctttattgaactgcatg 73
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 56 gttcaataaagctgtggga 74
|||||||||||||||||||
Sbjct: 79 gttcaataaagctgtggga 97
>55079_zma-miR396h:pmrd
Length = 116
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgcat 24
||||||||||||||||||||||||
Sbjct: 4 ttccacagctttcttgaactgcat 27
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 56 gttcaataaagctgtggga 74
|||||||||||||||||||
Sbjct: 95 gttcaataaagctgtggga 113
>55073_zma-miR396b:pmrd
Length = 136
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgcat 24
||||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcat 44
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 3 ccacagctttcttgaactgcatg 25
|||||||||| ||||||||||||
Sbjct: 115 ccacagctttattgaactgcatg 93
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 56 gttcaataaagctgtggga 74
|||||||||||||||||||
Sbjct: 99 gttcaataaagctgtggga 117
>54871_vvi-miR396d:pmrd
Length = 120
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgcat 24
||||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgcat 34
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 51 ttgctgttcaataaagctgtggga 74
|||| |||||||||||||||||||
Sbjct: 85 ttgcggttcaataaagctgtggga 108
>54645_sof-miR396:pmrd
Length = 134
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgcat 24
||||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcat 44
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 56 gttcaataaagctgtggga 74
|||||||||||||||||||
Sbjct: 97 gttcaataaagctgtggga 115
>54486_sbi-miR396b:pmrd
Length = 128
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgcat 24
||||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcat 44
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 56 gttcaataaagctgtggga 74
|||||||||||||||||||
Sbjct: 91 gttcaataaagctgtggga 109
>48946_osa-miR396b:pmrd
Length = 116
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgcat 24
||||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgcat 34
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 56 gttcaataaagctgtggga 74
|||||||||||||||||||
Sbjct: 88 gttcaataaagctgtggga 106
>48680_lja-miR396:pmrd
Length = 108
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgcat 24
||||||||||||||||||||||||
Sbjct: 16 ttccacagctttcttgaactgcat 39
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 50 tttgctgttcaataaagctgtggga 74
||||| |||||||||||||||||||
Sbjct: 70 tttgcggttcaataaagctgtggga 94
>48578_gma-miR396a:pmrd
Length = 140
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgcat 24
||||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcat 44
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 50 tttgctgttcaataaagctgtggga 74
||||| |||||||||||||||||||
Sbjct: 97 tttgcggttcaataaagctgtggga 121
>48485_gcl-miR396a:pmrd
Length = 101
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 1 ttccacagctttcttgaactgcat 24
||||||||||||||||||||||||
Sbjct: 101 ttccacagctttcttgaactgcat 78
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 50 tttgctgttcaataaagctgtggga 74
||||| |||||||||||||||||||
Sbjct: 25 tttgcggttcaataaagctgtggga 1
>52079_ptc-miRf10257-akr:pmrd
Length = 130
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 9 ttccacagctttcttgaactgca 31
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 56 gttcaataaagctgtggga 74
|||||||||||||||||||
Sbjct: 104 gttcaataaagctgtggga 122
>51735_ptc-miR396b:pmrd
Length = 132
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgca 33
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 56 gttcaataaagctgtggga 74
|||||||||||||||||||
Sbjct: 106 gttcaataaagctgtggga 124
>51734_ptc-miR396a:pmrd
Length = 123
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgca 33
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 51 ttgctgttcaataaagctgtggga 74
|||| |||||||||||||||||||
Sbjct: 92 ttgcggttcaataaagctgtggga 115
>48945_osa-miR396a:pmrd
Length = 154
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgca 33
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 56 gttcaataaagctgtggga 74
|||||||||||||||||||
Sbjct: 126 gttcaataaagctgtggga 144
>48508_ghr-miR396c:pmrd
Length = 115
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgca 23
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 51 ttgctgttcaataaagctgtggga 74
|||| |||||||||||||||||||
Sbjct: 92 ttgcggttcaataaagctgtggga 115
>48507_ghr-miR396b:pmrd
Length = 115
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgca 23
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 51 ttgctgttcaataaagctgtggga 74
|||| |||||||||||||||||||
Sbjct: 92 ttgcggttcaataaagctgtggga 115
>48110_ath-miRf11010-akr:pmrd
Length = 165
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 18 ttccacagctttcttgaactgca 40
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 50 tttgctgttcaataaagctgtggga 74
||||| |||||||||||||||||||
Sbjct: 124 tttgcggttcaataaagctgtggga 148
>47008_ath-miR396a:pmrd
Length = 151
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgca 33
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 50 tttgctgttcaataaagctgtggga 74
||||| |||||||||||||||||||
Sbjct: 117 tttgcggttcaataaagctgtggga 141
>55082_zma-miR396k:pmrd
Length = 98
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgc 22
||||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgc 22
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 3 ccacagctttcttgaactgcatg 25
|||||||||| ||||||||||||
Sbjct: 96 ccacagctttattgaactgcatg 74
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 56 gttcaataaagctgtggga 74
|||||||||||||||||||
Sbjct: 80 gttcaataaagctgtggga 98
>54870_vvi-miR396c:pmrd
Length = 108
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactg 21
|||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactg 31
>48486_gcl-miR396b:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 50 tttgctgttcaataaagctgtggga 74
||||| |||||||||||||||||||
Sbjct: 77 tttgcggttcaataaagctgtggga 101
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgcat 24
||||| ||||||||||||||||||
Sbjct: 1 ttccatagctttcttgaactgcat 24
>55078_zma-miR396g:pmrd
Length = 117
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 3 ttccacagctttcttgaact 22
>55077_zma-miR396f:pmrd
Length = 166
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 3 ttccacagctttcttgaact 22
>54869_vvi-miR396b:pmrd
Length = 108
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 14 ttccacagctttcttgaact 33
>54868_vvi-miR396a:pmrd
Length = 116
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 14 ttccacagctttcttgaact 33
>54487_sbi-miR396c:pmrd
Length = 162
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>53179_ptc-miRf11357-akr:pmrd
Length = 141
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 134 ttccacagctttcttgaact 115
>52893_ptc-miRf11071-akr:pmrd
Length = 148
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 142 ttccacagctttcttgaact 123
>52304_ptc-miRf10482-akr:pmrd
Length = 102
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 93 ttccacagctttcttgaact 74
>52080_ptc-miRf10258-akr:pmrd
Length = 141
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 134 ttccacagctttcttgaact 115
>51738_ptc-miR396e:pmrd
Length = 145
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>51737_ptc-miR396d:pmrd
Length = 154
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>51736_ptc-miR396c:pmrd
Length = 102
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>51564_pta-miR396:pmrd
Length = 119
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 17 ttccacagctttcttgaact 36
>48947_osa-miR396c:pmrd
Length = 141
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>48748_mtr-miR396a:pmrd
Length = 93
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 6 ttccacagctttcttgaact 25
>48580_gma-miR396c:pmrd
Length = 117
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>48579_gma-miR396b:pmrd
Length = 126
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>48374_bna-miR396a:pmrd
Length = 117
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>47009_ath-miR396b:pmrd
Length = 135
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>46888_aqc-miR396b:pmrd
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
